1-145328478-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145328478
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145328478
    reference: chr 1
allele count: 2
allele frequency: 2.959367879021041e-5
allele num: 67582
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4280+46G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17324G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+14972G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-16355G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-2285G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17324G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8001
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-145328482-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145328482
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145328482
    reference: chr 1
allele count: 1
allele frequency: 1.493785850860421e-5
allele num: 66944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17328C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-16351C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-2281C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+14976C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17328C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4280+50C>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1850
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 6488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-145329035-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329035
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329035
    reference: chr 1
allele count: 8
allele frequency: 8.163265306122448e-2
allele num: 98
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15798C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4281-44C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15529C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17881C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1728C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17881C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 39
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
  all individuals: 4
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

1-145329039-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329039
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329039
    reference: chr 1
allele count: 1
allele frequency: 8.474576271186441e-3
allele num: 118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17885T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4281-40T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15794T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1724T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15533T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17885T>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

1-145329094-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329094
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329094
    reference: chr 1
allele count: 2
allele frequency: 1.388888888888889e-2
allele num: 144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17940G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4296G>C
  hgvsp: ENST00000342960.5:c.4296G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1669G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17940G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15588G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15739G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu1432Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-145329095-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329095
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329095
    reference: chr 1
allele count: 6
allele frequency: 3.947368421052631e-2
allele num: 152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15589C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17941C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4297C>G
  hgvsp: ENSP00000345684.5:p.Leu1433Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17941C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15738C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1668C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu1433Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

1-145329102-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329102
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329102
    reference: chr 1
allele count: 2
allele frequency: 1.492537313432836e-2
allele num: 134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17948T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15596T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15731T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17948T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4304T>C
  hgvsp: ENSP00000345684.5:p.Val1435Ala
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1661T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val1435Ala
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

1-145329138-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329138
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329138
    reference: chr 1
allele count: 3
allele frequency: 1.89873417721519e-2
allele num: 158
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4340G>C
  hgvsp: ENSP00000345684.5:p.Arg1447Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15632G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+17984G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1625G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15695G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+17984G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Arg1447Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-145329205-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329205
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329205
    reference: chr 1
allele count: 1
allele frequency: 8.333333333333333e-3
allele num: 120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15628T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18051T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15699T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18051T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1558T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4407T>G
  hgvsp: ENSP00000345684.5:p.Phe1469Leu
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe1469Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-145329223-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329223
    reference: chr 1
allele count: 124
allele frequency: 1.0e0
allele num: 124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1540C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18069C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18069C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15717C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4425C>A
  hgvsp: ENSP00000345684.5:p.Asn1475Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15610C>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 5
hgvs: p.Asn1475Lys
num of homozygotes: 62
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-145329241-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329241
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329241
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 34
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4443T>C
  hgvsp: ENST00000342960.5:c.4443T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15592T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15735T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18087T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1522T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18087T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1481Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-145329280-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145329280
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145329280
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 14
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+15774G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-15553G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4453+29G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18126G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-1483G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18126G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

1-145330064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330064
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330064
    reference: chr 1
allele count: 6
allele frequency: 3.368893879842785e-4
allele num: 17810
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4552C>T
  hgvsp: ENSP00000345684.5:p.Pro1518Ser
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14769C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-699C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18910C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16558C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18910C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26838
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genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
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genotype quality: GenotypeQuality
  all individuals: 22
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genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 242
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 25
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genotype quality: GenotypeQuality
  all individuals: 13934
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genotype quality: GenotypeQuality
  all individuals: 6050
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro1518Ser
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-145330068-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330068
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330068
    reference: chr 1
allele count: 1
allele frequency: 3.9329819869425e-5
allele num: 25426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16562G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4556G>T
  hgvsp: ENSP00000345684.5:p.Cys1519Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-695G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18914G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14765G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18914G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 368
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 197
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genotype quality: GenotypeQuality
  all individuals: 202
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 58
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genotype quality: GenotypeQuality
  all individuals: 176
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 267
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 196
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genotype quality: GenotypeQuality
  all individuals: 11388
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genotype quality: GenotypeQuality
  all individuals: 89
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  variant carriers: 0
hgvs: p.Cys1519Phe
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

1-145330071-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330071
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330071
    reference: chr 1
allele count: 2
allele frequency: 6.279829188646068e-5
allele num: 31848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14762C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16565C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-692C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18917C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18917C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4559C>T
  hgvsp: ENSP00000345684.5:p.Pro1520Leu
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24761
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13509
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genotype depth: GenotypeDepth
  all individuals: 10127
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
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genotype depth: GenotypeDepth
  all individuals: 1263
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genotype depth: GenotypeDepth
  all individuals: 32
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 186
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  variant carriers: 1
hgvs: p.Pro1520Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-145330072-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330072
    reference: chr 1
allele count: 1
allele frequency: 2.954908102358017e-5
allele num: 33842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18918C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4560C>T
  hgvsp: ENST00000342960.5:c.4560C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16566C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-691C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14761C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18918C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
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genotype depth: GenotypeDepth
  all individuals: 445
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 9711
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23201
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
hgvs: c.4560C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-145330085-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330085
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330085
    reference: chr 1
allele count: 17
allele frequency: 3.298153034300791e-4
allele num: 51544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18931G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+11G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-678G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16579G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14748G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18931G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 21826
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 6742
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18148
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

1-145330085-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330085
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330085
    reference: chr 1
allele count: 102
allele frequency: 1.978891820580475e-3
allele num: 51544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14748G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16579G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18931G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18931G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+11G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-678G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 21826
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 6890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18893
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 18950
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6742
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.75e1
  variant carriers: 4
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-145330089-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330089
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330089
    reference: chr 1
allele count: 1
allele frequency: 1.722415515518964e-5
allele num: 58058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18935T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14744T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16583T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18935T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+15T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-674T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5934
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16196
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

1-145330091-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330091
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330091
    reference: chr 1
allele count: 6
allele frequency: 9.883701775771753e-5
allele num: 60706
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+17G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16585G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-672G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18937G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14742G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18937G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15811
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5643
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23006
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-145330091-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330091
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330091
    reference: chr 1
allele count: 1
allele frequency: 1.647283629295292e-5
allele num: 60706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-672G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18937G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+17G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14742G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18937G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16585G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15811
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
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genotype depth: GenotypeDepth
  all individuals: 280
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
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genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 5643
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15252
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 40
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genotype quality: GenotypeQuality
  all individuals: 166
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genotype quality: GenotypeQuality
  all individuals: 122
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genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

1-145330096-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330096
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330096
    reference: chr 1
allele count: 15
allele frequency: 2.185824201445559e-4
allele num: 68624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18942T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18942T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-667T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16590T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+22T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14737T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29998
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  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 26
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 712
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
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genotype quality: GenotypeQuality
  all individuals: 495
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genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4812
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 106
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genotype quality: GenotypeQuality
  all individuals: 12712
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 110
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genotype quality: GenotypeQuality
  all individuals: 687
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genotype quality: GenotypeQuality
  all individuals: 3332
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-145330098-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330098
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330098
    reference: chr 1
allele count: 2
allele frequency: 2.848191398461977e-5
allele num: 70220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18944C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16592C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-665C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18944C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14735C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+24C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12567
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 69
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 116
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genotype quality: GenotypeQuality
  all individuals: 107
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genotype quality: GenotypeQuality
  all individuals: 26790
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 512
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genotype quality: GenotypeQuality
  all individuals: 4636
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genotype quality: GenotypeQuality
  all individuals: 279
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

1-145330099-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330099
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330099
    reference: chr 1
allele count: 1
allele frequency: 1.40583703537086e-5
allele num: 71132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18945T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14734T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16593T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18945T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-664T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+25T>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11933
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4524
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

1-145330100-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330100
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330100
    reference: chr 1
allele count: 2
allele frequency: 2.783499415465123e-5
allele num: 71852
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+26T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14733T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-663T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18946T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16594T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18946T>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4444
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27535
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-145330104-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330104
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330104
    reference: chr 1
allele count: 1
allele frequency: 1.348108603629108e-5
allele num: 74178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-659T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14729T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18950T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18950T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+30T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16598T>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10950
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

1-145330107-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330107
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330107
    reference: chr 1
allele count: 34
allele frequency: 4.487500989889924e-4
allele num: 75766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18953G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14726G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18953G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+33G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-656G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16601G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33171
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 197
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1112
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  variant carriers: 4
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 206
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genotype quality: GenotypeQuality
  all individuals: 29082
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genotype quality: GenotypeQuality
  all individuals: 4173
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
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genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 81
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genotype quality: GenotypeQuality
  all individuals: 3705
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genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 10376
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

1-145330107-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330107
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330107
    reference: chr 1
allele count: 2
allele frequency: 2.639706464641132e-5
allele num: 75766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-656G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14726G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16601G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18953G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+33G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18953G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33171
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4173
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-145330110-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330110
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330110
    reference: chr 1
allele count: 4
allele frequency: 5.189817577912136e-5
allele num: 77074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16604T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+36T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14723T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18956T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-653T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18956T>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10224
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genotype depth: GenotypeDepth
  all individuals: 753
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genotype depth: GenotypeDepth
  all individuals: 7
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4089
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 487
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genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 87
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genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1073
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genotype quality: GenotypeQuality
  all individuals: 29472
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/1-145330112-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330112
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330112
    reference: chr 1
allele count: 1
allele frequency: 1.284950657894737e-5
allele num: 77824
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-651A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16606A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+38A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18958A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18958A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14721A>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
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genotype quality: GenotypeQuality
  all individuals: 374
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genotype quality: GenotypeQuality
  all individuals: 3980
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29719
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 87
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
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genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 830
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 362
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/1-145330113-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330113
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330113
    reference: chr 1
allele count: 1
allele frequency: 1.27756343102435e-5
allele num: 78274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16607A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+39A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14720A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18959A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-650A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18959A>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 4083
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34147
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
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genotype quality: GenotypeQuality
  all individuals: 29959
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
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genotype quality: GenotypeQuality
  all individuals: 364
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 3973
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-145330114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330114
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330114
    reference: chr 1
allele count: 1
allele frequency: 1.273496001222556e-5
allele num: 78524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18960C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14719C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-649C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16608C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18960C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+40C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3836
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-145330115-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330115
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330115
    reference: chr 1
allele count: 1
allele frequency: 1.268874508311128e-5
allele num: 78810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-648A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16609A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18961A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+41A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14718A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18961A>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34248
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 7
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genotype depth: GenotypeDepth
  all individuals: 2588
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genotype depth: GenotypeDepth
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 851
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genotype quality: GenotypeQuality
  all individuals: 183
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genotype quality: GenotypeQuality
  all individuals: 8876
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genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29734
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 217
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 100
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genotype quality: GenotypeQuality
  all individuals: 3810
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-145330117-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330117
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330117
    reference: chr 1
allele count: 2
allele frequency: 2.513320599175631e-5
allele num: 79576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18963C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18963C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14716C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+43C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-646C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16611C>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 9216
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 10
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genotype depth: GenotypeDepth
  all individuals: 4074
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 26
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 243
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genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 111
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genotype quality: GenotypeQuality
  all individuals: 417
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genotype quality: GenotypeQuality
  all individuals: 29815
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genotype quality: GenotypeQuality
  all individuals: 3724
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genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 197
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 368
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genotype quality: GenotypeQuality
  all individuals: 220
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genotype quality: GenotypeQuality
  all individuals: 289
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genotype quality: GenotypeQuality
  all individuals: 371
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genotype quality: GenotypeQuality
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-145330117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330117
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330117
    reference: chr 1
allele count: 5
allele frequency: 6.283301497939077e-5
allele num: 79576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18963C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18963C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-646C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14716C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16611C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+43C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 34449
  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4074
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3861
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 289
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genotype quality: GenotypeQuality
  all individuals: 8521
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genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-145330118-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330118
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330118
    reference: chr 1
allele count: 3
allele frequency: 3.753002401921537e-5
allele num: 79936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14715T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16612T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18964T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+44T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18964T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-645T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3727
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

1-145330119-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330119
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330117
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 80098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14713_851-14712delGA
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-643_*789-642delGA
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16614_1432+16615delGA
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18966_*1558+18967delGA
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+46_4562+47delGA
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18966_1040+18967delGA
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: GGA
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

1-145330120-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330120
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330120
    reference: chr 1
allele count: 1
allele frequency: 1.245174947080065e-5
allele num: 80310
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+46G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18966G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14713G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16614G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-643G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18966G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3618
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8049
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-145330123-G-GAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330123
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330125
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 80762
alternate allele: GAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18969_*1558+18970insAT
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14710_851-14709insAT
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-640_*789-639insAT
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18969_1040+18970insAT
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16617_1432+16618insAT
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+49_4562+50insAT
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7673
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

1-145330124-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330124
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330124
    reference: chr 1
allele count: 1
allele frequency: 1.236307890116955e-5
allele num: 80886
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-639C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4562+50C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14709C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+18970C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1432+16618C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+18970C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3416
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-145330633-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330633
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330633
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 1292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14200T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4563-50T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16622T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19479T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19479T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-130T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-145330656-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330656
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330656
    reference: chr 1
allele count: 1
allele frequency: 8.460236886632825e-4
allele num: 1182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19502A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19502A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4563-27A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14177A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16599A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-107A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6595
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-145330672-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330672
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330672
    reference: chr 1
allele count: 8
allele frequency: 1.234567901234568e-2
allele num: 648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19518C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-91C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19518C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4563-11C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14161C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16583C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4721
  bin: 7.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

1-145330676-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330676
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330676
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 642
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4563-7T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19522T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14157T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19522T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-87T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16579T>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5463
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
hgvs: c.4563-7T>G
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-145330712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330712
    reference: chr 1
allele count: 5
allele frequency: 9.541984732824428e-3
allele num: 524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14121G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4592G>A
  hgvsp: ENSP00000345684.5:p.Gly1531Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-51G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19558G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19558G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16543G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Gly1531Glu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-145330728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330728
    reference: chr 1
allele count: 1
allele frequency: 1.706484641638225e-3
allele num: 586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-35G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4608G>A
  hgvsp: ENST00000342960.5:c.4608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19574G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16527G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14105G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19574G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Gln1536Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-145330735-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330735
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330735
    reference: chr 1
allele count: 2
allele frequency: 3.484320557491289e-3
allele num: 574
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4615C>G
  hgvsp: ENSP00000345684.5:p.Leu1539Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16520C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19581C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19581C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14098C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-28C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu1539Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-145330744-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330744
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19590T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-19T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16511T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14089T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19590T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4624T>A
  hgvsp: ENSP00000345684.5:p.Cys1542Ser
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys1542Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-145330748-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330748
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330748
    reference: chr 1
allele count: 1
allele frequency: 2.083333333333333e-3
allele num: 480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16507A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19594A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19594A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14085A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-15A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4628A>C
  hgvsp: ENSP00000345684.5:p.Tyr1543Ser
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.5e0
  variant carriers: 1
hgvs: p.Tyr1543Ser
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

1-145330752-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330752
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19598A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19598A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4632A>G
  hgvsp: ENST00000342960.5:c.4632A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-11A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16503A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14081A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser1544Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-145330758-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330758
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330758
    reference: chr 1
allele count: 1
allele frequency: 2.145922746781116e-3
allele num: 466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*789-5T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14075T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19604T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19604T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16497T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4638T>G
  hgvsp: ENST00000342960.5:c.4638T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: false
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1894
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
hgvs: c.*789-5T>G
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-145330766-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330766
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330766
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16489G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14067G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*792G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4646G>A
  hgvsp: ENSP00000345684.5:p.Cys1549Tyr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19612G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19612G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys1549Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/1-145330777-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330777
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330777
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 342
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4657A>C
  hgvsp: ENSP00000345684.5:p.Thr1553Pro
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14056A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*803A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19623A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16478A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19623A>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr1553Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

1-145330784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330784
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330784
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14049C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*810C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19630C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4664C>T
  hgvsp: ENSP00000345684.5:p.Ser1555Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16471C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19630C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser1555Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

1-145330786-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330786
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330786
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 318
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4666T>G
  hgvsp: ENSP00000345684.5:p.Cys1556Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16469T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14047T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19632T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*812T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19632T>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys1556Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-145330812-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330812
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330812
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14021T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*838T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19658T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19658T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4692T>C
  hgvsp: ENST00000342960.5:c.4692T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16443T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr1564Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

1-145330829-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330829
    reference: chr 1
allele count: 1
allele frequency: 8.19672131147541e-3
allele num: 122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19675A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19675A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16426A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-14004A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*855A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4709A>G
  hgvsp: ENSP00000345684.5:p.His1570Arg
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 1
hgvs: p.His1570Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-145330854-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145330854
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145330854
    reference: chr 1
allele count: 1
allele frequency: 8.771929824561403e-3
allele num: 114
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.4734T>C
  hgvsp: ENST00000342960.5:c.4734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1040+19700T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-13979T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1558+19700T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*880T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-16401T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
  all individuals: 459
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: c.4734T>C
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

1-145333752-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333752
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 24
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-11081T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20543T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5013-45T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20543T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1013+1450T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13503T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

1-145333753-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333753
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333753
    reference: chr 1
allele count: 5
allele frequency: 4.166666666666667e-1
allele num: 12
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5013-44C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20542C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13502C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20542C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-11080C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1013+1451C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

1-145333812-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333812
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333812
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 22
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20483G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5028G>C
  hgvsp: ENST00000342960.5:c.5028G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20483G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-11021G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13443G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1013+1510G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu1676Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-145333813-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333813
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333813
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 22
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1013+1511C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5029C>T
  hgvsp: ENST00000342960.5:c.5029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13442C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20482C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-11020C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20482C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu1677Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-145333823-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333823
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333823
    reference: chr 1
allele count: 2
allele frequency: 6.666666666666667e-2
allele num: 30
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5039T>C
  hgvsp: ENSP00000345684.5:p.Val1680Ala
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1013+1521T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20472T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20472T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-11010T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13432T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Val1680Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-145333826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333826
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333826
    reference: chr 1
allele count: 2
allele frequency: 7.692307692307693e-2
allele num: 26
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20469A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13429A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5042A>G
  hgvsp: ENSP00000345684.5:p.Glu1681Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-11007A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1013+1524A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20469A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu1681Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-145333902-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333902
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333902
    reference: chr 1
allele count: 7
allele frequency: 2.333333333333333e-1
allele num: 30
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20393C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5118C>G
  hgvsp: ENSP00000345684.5:p.Cys1706Trp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20393C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13353C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10931C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1567C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Cys1706Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

1-145333908-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333908
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333908
    reference: chr 1
allele count: 2
allele frequency: 5.882352941176471e-2
allele num: 34
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5124C>G
  hgvsp: ENST00000342960.5:c.5124C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1561C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13347C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10925C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20387C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20387C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro1708Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

1-145333916-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333916
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333916
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 38
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1553G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20379G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5132G>T
  hgvsp: ENSP00000345684.5:p.Ser1711Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10917G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13339G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20379G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser1711Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-145333923-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333923
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333923
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 36
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20372T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13332T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10910T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20372T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1546T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5139T>G
  hgvsp: ENSP00000345684.5:p.Phe1713Leu
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe1713Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-145333929-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333929
    reference: chr 1
allele count: 1
allele frequency: 4.166666666666666e-2
allele num: 24
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20366A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1540A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13326A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10904A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20366A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5145A>G
  hgvsp: ENST00000342960.5:c.5145A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala1715Ala
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-145333936-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333936
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333936
    reference: chr 1
allele count: 2
allele frequency: 9.090909090909091e-2
allele num: 22
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20359G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1533G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20359G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10897G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5152G>A
  hgvsp: ENSP00000345684.5:p.Glu1718Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13319G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu1718Lys
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/1-145333941-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333941
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333941
    reference: chr 1
allele count: 27
allele frequency: 9.0e-1
allele num: 30
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1528C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20354C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5157C>A
  hgvsp: ENSP00000345684.5:p.Asn1719Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20354C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13314C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10892C>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn1719Lys
num of homozygotes: 12
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

1-145333959-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333959
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333959
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 4
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20336T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10874T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13296T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20336T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1510T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5175T>C
  hgvsp: ENST00000342960.5:c.5175T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu1725Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

1-145333962-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145333962
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145333962
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 6
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.5178C>T
  hgvsp: ENST00000342960.5:c.5178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.1433-13293C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.1041-20333C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.851-10871C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.*1014-1507C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*1559-20333C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp1726Asp
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 3103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3771
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2686
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3808
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 6.261740763932373e-4
allele num: 3194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4164
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 1.633e1

MQ
type: SiteQuality
SIO_000300: 3.612e1

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.437e0

DP
type: SiteQuality
SIO_000300: 8.78138e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.37e-1

GenotypeQuality
all individuals: 944
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.41779497098646e-4
allele num: 4136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

DP
type: SiteQuality
SIO_000300: 8.77066e5

VQSLOD
type: SiteQuality
SIO_000300: -5.992e0

FS
type: SiteQuality
SIO_000300: 4.611e0

MQ
type: SiteQuality
SIO_000300: 2.894e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.38e-1

QD
type: SiteQuality
SIO_000300: 2.57e0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 1.0e-1
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.333333333333333e-2
allele num: 36
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 6.8e0

VQSLOD
type: SiteQuality
SIO_000300: -3.08e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 2.807e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.82e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 3.5e3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 534
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.173913043478261e-2
allele num: 46
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.208e0

DP
type: SiteQuality
SIO_000300: 3.5e3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.78e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.833e0

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

MQ
type: SiteQuality
SIO_000300: 2.884e1

QD
type: SiteQuality
SIO_000300: 5.45e0

GenotypeQuality
all individuals: 731
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.785714285714286e-2
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.785714285714286e-2
allele num: 56
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.44e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.769e0

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 2.83e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.8125e-2
allele num: 64
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

African
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allele frequency: 1.851851851851852e-2
allele num: 54
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 2
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South Asian
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

VQSLOD
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InbreedingCoeff
type: SiteQuality
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FS
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

ClippingRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 2.811e1

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 2
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.333333333333333e-2
allele num: 60
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8
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MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

DP
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SIO_000300: 4.621e3

MQ
type: SiteQuality
SIO_000300: 2.786e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.409999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.007e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.612903225806452e-2
allele num: 62
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

African
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allele count: 2
allele frequency: 3.448275862068965e-2
allele num: 58
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.51e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
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DP
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SIO_000300: 3.971e3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.19e-1

MQ
type: SiteQuality
SIO_000300: 2.85e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.0e-2
allele num: 50
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.9e1

DP
type: SiteQuality
SIO_000300: 2.62e3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.568e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 5.16e0

VQSLOD
type: SiteQuality
SIO_000300: -5.532e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.16e-2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 50

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 6
allele frequency: 1.0e0
allele num: 6
num of homozygotes: 3

African
type: Population
allele count: 38
allele frequency: 1.0e0
allele num: 38
num of homozygotes: 19

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 1.0e0
allele num: 4
num of homozygotes: 2

Latino
type: Population
allele count: 16
allele frequency: 1.0e0
allele num: 16
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 60
allele frequency: 1.0e0
allele num: 60
num of homozygotes: 30

QD
type: SiteQuality
SIO_000300: 3.292e1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.574e3

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 2.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 2
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

South Asian
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: NaN
allele num: 0
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Other
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allele frequency: NaN
allele num: 0
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South Asian
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -9.41e-2

ClippingRankSum
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
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FS
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DP
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ReadPosRankSum
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 5.060728744939271e-4
allele num: 11856
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 1532
num of homozygotes: 0

MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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African
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European (Non-Finnish)
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allele num: 16884
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ReadPosRankSum
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MQRankSum
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FS
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele num: 2444
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Latino
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num of homozygotes: 0

African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.747887190200361e-5
allele num: 21062
num of homozygotes: 0

InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
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DP
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BaseQRankSum
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
all individuals: 1826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9583
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.849114703618168e-4
allele num: 2598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.512e0

VQSLOD
type: SiteQuality
SIO_000300: -7.016e0

MQ
type: SiteQuality
SIO_000300: 2.206e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.07e-2

DP
type: SiteQuality
SIO_000300: 5.43685e5

QD
type: SiteQuality
SIO_000300: 3.99e0

GenotypeQuality
all individuals: 2479
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 225
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18950
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 719
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.776935378783392e-4
allele num: 33766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 2.068446784505453e-3
allele num: 5318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQ
type: SiteQuality
SIO_000300: 2.178e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.494e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 2.25e0

VQSLOD
type: SiteQuality
SIO_000300: -5.354e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.87972e5

GenotypeQuality
all individuals: 18148
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 243
bin: 9.75e1
variant carriers: 47

GenotypeQuality
all individuals: 225
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 647
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 2

East Asian
type: Population
allele count: 15
allele frequency: 3.978779840848806e-3
allele num: 3770
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 2.068446784505453e-3
allele num: 5318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 67
allele frequency: 1.98424450630812e-3
allele num: 33766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 2.320185614849188e-3
allele num: 1724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.296610169491525e-4
allele num: 3776
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.051893408134642e-3
allele num: 2852
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.354e0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.178e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

DP
type: SiteQuality
SIO_000300: 6.87972e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.494e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 2.25e0

GenotypeQuality
all individuals: 571
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.944640753828033e-4
allele num: 3396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4246
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.163e0

DP
type: SiteQuality
SIO_000300: 7.39414e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.59e-1

MQ
type: SiteQuality
SIO_000300: 2.188e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: -8.683e0

MQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.732e0

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 396
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2856
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.09580105992662e-5
allele num: 39248
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.681514476614699e-4
allele num: 4490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4380
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.725897920604915e-4
allele num: 2116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.226e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

DP
type: SiteQuality
SIO_000300: 7.63222e5

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 2.53e0

VQSLOD
type: SiteQuality
SIO_000300: -5.409e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

GenotypeQuality
all individuals: 23006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2856
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.54790052996331e-5
allele num: 39248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2116
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.409e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

DP
type: SiteQuality
SIO_000300: 7.63222e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 2.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

MQ
type: SiteQuality
SIO_000300: 2.226e1

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 912
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26280
bin: 6.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5070
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.911392405063291e-4
allele num: 2528
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 5.506607929515419e-4
allele num: 7264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 2.050207298737983e-4
allele num: 43898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 6.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.225e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQ
type: SiteQuality
SIO_000300: 2.241e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

DP
type: SiteQuality
SIO_000300: 8.29563e5

QD
type: SiteQuality
SIO_000300: 3.11e0

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.465681239673112e-5
allele num: 44786
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.44016e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.724e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.493e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 4.2405e1

QD
type: SiteQuality
SIO_000300: 1.338e1

VQSLOD
type: SiteQuality
SIO_000300: -1.543e1

MQ
type: SiteQuality
SIO_000300: 2.365e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27218
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.208187960959237e-5
allele num: 45286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2686
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

QD
type: SiteQuality
SIO_000300: 5.9e0

VQSLOD
type: SiteQuality
SIO_000300: -7.352e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

FS
type: SiteQuality
SIO_000300: 1.641e0

MQ
type: SiteQuality
SIO_000300: 2.342e1

DP
type: SiteQuality
SIO_000300: 8.51899e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.26e-1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.380777149866387e-5
allele num: 45654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4960
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

DP
type: SiteQuality
SIO_000300: 8.58184e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.02e0

VQSLOD
type: SiteQuality
SIO_000300: -6.487e0

MQRankSum
type: SiteQuality
SIO_000300: -1.387e0

MQ
type: SiteQuality
SIO_000300: 2.221e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28609
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.904761904761905e-4
allele num: 5250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.614e0

MQ
type: SiteQuality
SIO_000300: 2.205e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 2.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.78138e5

GenotypeQuality
all individuals: 464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 6.06872305696229e-4
allele num: 47786
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.496255616575137e-4
allele num: 8012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5384
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 6.666666666666666e-4
allele num: 3000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.824817518248175e-4
allele num: 5480
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

DP
type: SiteQuality
SIO_000300: 8.94717e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.856e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

QD
type: SiteQuality
SIO_000300: 3.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 2.276e1

GenotypeQuality
all individuals: 380
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10376
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47786
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.566333808844508e-4
allele num: 5608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

MQ
type: SiteQuality
SIO_000300: 2.276e1

QD
type: SiteQuality
SIO_000300: 3.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.856e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

DP
type: SiteQuality
SIO_000300: 8.94717e5

GenotypeQuality
all individuals: 354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9972
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5700
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.680078508341511e-4
allele num: 8152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.0631318341242e-5
allele num: 48470
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.568e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

DP
type: SiteQuality
SIO_000300: 9.06566e5

QD
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

MQ
type: SiteQuality
SIO_000300: 2.296e1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9568
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.73973556019485e-4
allele num: 5748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 2.153e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -6.595e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 9.13477e5

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.037074760643716e-5
allele num: 49090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5528
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -6.155e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

DP
type: SiteQuality
SIO_000300: 9.17295e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

MQ
type: SiteQuality
SIO_000300: 2.383e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e-1

GenotypeQuality
all individuals: 843
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.724137931034483e-4
allele num: 5800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49212
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 9.20519e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.3e1

QD
type: SiteQuality
SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

GenotypeQuality
all individuals: 1123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3838
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.682368775235532e-4
allele num: 5944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

MQ
type: SiteQuality
SIO_000300: 2.368e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 9.23166e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

GenotypeQuality
all individuals: 3861
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8521
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.697792869269949e-4
allele num: 5890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.632919660352711e-4
allele num: 6124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

DP
type: SiteQuality
SIO_000300: 9.32057e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.221e0

QD
type: SiteQuality
SIO_000300: 2.34e0

FS
type: SiteQuality
SIO_000300: 4.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.043e0

MQ
type: SiteQuality
SIO_000300: 2.272e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.022687960094935e-5
allele num: 49718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.093378607809847e-4
allele num: 5890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.043e0

FS
type: SiteQuality
SIO_000300: 4.34e-1

DP
type: SiteQuality
SIO_000300: 9.32057e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.221e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.272e1

QD
type: SiteQuality
SIO_000300: 2.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8443
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.010096962897668e-5
allele num: 49916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.34e0

FS
type: SiteQuality
SIO_000300: 9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 9.35546e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.158e0

MQ
type: SiteQuality
SIO_000300: 2.317e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

QD
type: SiteQuality
SIO_000300: 2.78e0

GenotypeQuality
all individuals: 3648
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3334
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

QD
type: SiteQuality
SIO_000300: 1.843e1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQ
type: SiteQuality
SIO_000300: 2.439e1

FS
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 9.38203e5

GenotypeQuality
all individuals: 344
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3873
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.996805111821086e-5
allele num: 50080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.242e0

QD
type: SiteQuality
SIO_000300: 4.54e0

MQ
type: SiteQuality
SIO_000300: 2.301e1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.4119e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

GenotypeQuality
all individuals: 29490
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.47851e5

QD
type: SiteQuality
SIO_000300: 1.946e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.5e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.96e0

GenotypeQuality
all individuals: 286
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 418
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.984126984126984e-5
allele num: 50400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

DP
type: SiteQuality
SIO_000300: 9.49955e5

QD
type: SiteQuality
SIO_000300: 3.62e0

MQ
type: SiteQuality
SIO_000300: 2.336e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 5.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.92e0

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 3.199e1

DP
type: SiteQuality
SIO_000300: 4.2122e4

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.695e0

FS
type: SiteQuality
SIO_000300: 6.369e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.61e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.571428571428571e-2
allele num: 28
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.949e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.53e-2

QD
type: SiteQuality
SIO_000300: 3.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 3.7e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

DP
type: SiteQuality
SIO_000300: 3.565e4

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 9
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.31578947368421e-2
allele num: 76
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.541850220264317e-2
allele num: 454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.8625e4

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.39e-2

MQ
type: SiteQuality
SIO_000300: 3.38e1

VQSLOD
type: SiteQuality
SIO_000300: -8.331e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

FS
type: SiteQuality
SIO_000300: 1.31546e2

QD
type: SiteQuality
SIO_000300: 1.124e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.039999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.514e0

FS
type: SiteQuality
SIO_000300: 9.109999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

QD
type: SiteQuality
SIO_000300: 2.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 2.5457e4

MQ
type: SiteQuality
SIO_000300: 3.324e1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.275510204081633e-2
allele num: 392
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.0823e1

MQ
type: SiteQuality
SIO_000300: 2.9e1

QD
type: SiteQuality
SIO_000300: 4.1e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

DP
type: SiteQuality
SIO_000300: 1.5521e4

VQSLOD
type: SiteQuality
SIO_000300: -7.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.67e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

GenotypeQuality
all individuals: 2275
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.222222222222222e-3
allele num: 450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

MQ
type: SiteQuality
SIO_000300: 2.65e1

DP
type: SiteQuality
SIO_000300: 1.4576e4

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.141e0

QD
type: SiteQuality
SIO_000300: 5.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 4
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
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African
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Other
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European (Finnish)
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allele frequency: NaN
allele num: 0
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East Asian
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allele frequency: 0.0e0
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Latino
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele num: 0
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Other
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allele frequency: 0.0e0
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DP
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Non-Finnish)
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allele frequency: 2.702702702702703e-3
allele num: 370
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European (Finnish)
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allele num: 0
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Other
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East Asian
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FS
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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Latino
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Other
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European (Non-Finnish)
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East Asian
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DP
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FS
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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European (Finnish)
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allele frequency: NaN
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Latino
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allele num: 32
num of homozygotes: 0

InbreedingCoeff
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DP
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele frequency: NaN
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num of homozygotes: 0

African
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South Asian
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East Asian
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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Latino
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Other
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European (Finnish)
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DP
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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MQ
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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African
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East Asian
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Other
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DP
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BaseQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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South Asian
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African
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Other
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European (Non-Finnish)
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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DP
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Latino
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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ReadPosRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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European (Finnish)
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FS
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VQSLOD
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InbreedingCoeff
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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QD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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South Asian
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European (Finnish)
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Other
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African
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DP
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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MQ
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QD
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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allele frequency: 3.333333333333333e-1
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European (Finnish)
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East Asian
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South Asian
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BaseQRankSum
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QD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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Latino
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QD
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VQSLOD
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FS
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BaseQRankSum
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DP
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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Other
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
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DP
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QD
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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South Asian
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Other
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InbreedingCoeff
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DP
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QD
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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African
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European (Non-Finnish)
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MQ
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DP
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FS
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VQSLOD
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InbreedingCoeff
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QD
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European (Finnish)
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African
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.25e-1
allele num: 8
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.9e1

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

DP
type: SiteQuality
SIO_000300: 1.312e3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.062e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.074e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.25e-1
allele num: 8
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.333333333333333e-2
allele num: 12
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.241e1

VQSLOD
type: SiteQuality
SIO_000300: -4.598e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 2.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.283e3

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 66

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 39

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.0e0
allele num: 2
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 1.0e0
allele num: 18
num of homozygotes: 9

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.5e-1
allele num: 8
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.237e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.538e1

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

MQ
type: SiteQuality
SIO_000300: 2.9e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

QD
type: SiteQuality
SIO_000300: 3.083e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.52e-1

DP
type: SiteQuality
SIO_000300: 1.262e3

GenotypeQuality
all individuals: 184
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.810000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.666e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQ
type: SiteQuality
SIO_000300: 2.9e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 8.92e2

QD
type: SiteQuality
SIO_000300: 7.6e0