2-101622383-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622383
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622383
    reference: chr 2
allele count: 1
allele frequency: 9.367681498829039e-6
allele num: 106750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1631A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-38A>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19363
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-101622388-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622388
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622388
    reference: chr 2
allele count: 3
allele frequency: 2.774592134956162e-5
allele num: 108124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-33T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1636T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-33T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4137
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4645
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

2-101622392-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622392
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622392
    reference: chr 2
allele count: 1
allele frequency: 9.14377674554698e-6
allele num: 109364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1640C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-29C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-29C>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6112
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

2-101622394-TCAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622394
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622391
    reference: chr 2
allele count: 3
allele frequency: 2.724399723927495e-5
allele num: 110116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1645_*1647delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-24_197-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-24_234-22delGCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-24_*72-22delGCA
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9341
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7828
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: TCAG
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/2-101622395-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622395
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622395
    reference: chr 2
allele count: 2
allele frequency: 1.812809310588619e-5
allele num: 110326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1643C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-26C>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9580
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5604
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

2-101622399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622399
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622399
    reference: chr 2
allele count: 2
allele frequency: 1.780119624038735e-5
allele num: 112352
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1647A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-22A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

2-101622405-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622405
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622405
    reference: chr 2
allele count: 12
allele frequency: 1.047376322312607e-4
allele num: 114572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1653A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-16A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35769
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3525
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

2-101622408-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622408
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622408
    reference: chr 2
allele count: 9
allele frequency: 7.799906401123187e-5
allele num: 115386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-13A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1656A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-13A>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36581
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11399
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

2-101622409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622409
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622409
    reference: chr 2
allele count: 1
allele frequency: 8.647526807333103e-6
allele num: 115640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1657T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-12T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11474
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44724
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4006
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

2-101622413-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622413
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622413
    reference: chr 2
allele count: 1
allele frequency: 8.570595999245788e-6
allele num: 116678
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*72-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1661T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.197-8T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.234-8T>A
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
hgvs: c.234-8T>A
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum

2-101622424-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622424
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622424
    reference: chr 2
allele count: 1
allele frequency: 8.391937026904549e-6
allele num: 119162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.237T>C
  hgvsp: ENST00000409038.1:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*75T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.237T>C
  hgvsp: ENST00000409028.4:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.237T>C
  hgvsp: ENST00000409320.3:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.237T>C
  hgvsp: ENST00000456292.1:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.237T>C
  hgvsp: ENST00000264258.3:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.237T>C
  hgvsp: ENST00000409650.1:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.200T>C
  hgvsp: ENST00000441435.1:c.200T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.237T>C
  hgvsp: ENST00000409733.1:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1672T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn79Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

2-101622435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622435
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622435
    reference: chr 2
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.248G>A
  hgvsp: ENSP00000264258.3:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.248G>A
  hgvsp: ENSP00000386681.1:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.248G>A
  hgvsp: ENSP00000412976.1:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.248G>A
  hgvsp: ENSP00000386717.3:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*86G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.248G>A
  hgvsp: ENSP00000386271.1:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1683G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.248G>A
  hgvsp: ENSP00000386737.1:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.248G>A
  hgvsp: ENSP00000387163.3:p.Arg83Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.211G>A
  hgvsp: ENSP00000408172.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg83Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

2-101622439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622439
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622439
    reference: chr 2
allele count: 80
allele frequency: 6.641980638626439e-4
allele num: 120446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.252C>T
  hgvsp: ENST00000264258.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.252C>T
  hgvsp: ENST00000409733.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.252C>T
  hgvsp: ENST00000456292.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.252C>T
  hgvsp: ENST00000409038.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.252C>T
  hgvsp: ENST00000409028.4:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.252C>T
  hgvsp: ENST00000409320.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1687C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*90C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.252C>T
  hgvsp: ENST00000409650.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.215C>T
  hgvsp: ENST00000441435.1:c.215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40016
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile84Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

2-101622440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622440
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622440
    reference: chr 2
allele count: 1
allele frequency: 8.300132802124834e-6
allele num: 120480
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.253C>T
  hgvsp: ENSP00000386717.3:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.253C>T
  hgvsp: ENSP00000412976.1:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*91C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.253C>T
  hgvsp: ENSP00000386271.1:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.253C>T
  hgvsp: ENSP00000264258.3:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.253C>T
  hgvsp: ENSP00000387163.3:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.253C>T
  hgvsp: ENSP00000386737.1:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.216C>T
  hgvsp: ENSP00000408172.1:p.Arg73Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.253C>T
  hgvsp: ENSP00000386681.1:p.Arg85Cys
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1688C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13061
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg85Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum

2-101622447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622447
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622447
    reference: chr 2
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.260G>A
  hgvsp: ENSP00000386271.1:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.260G>A
  hgvsp: ENSP00000264258.3:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.260G>A
  hgvsp: ENSP00000387163.3:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.260G>A
  hgvsp: ENSP00000386681.1:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1695G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.260G>A
  hgvsp: ENSP00000412976.1:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.223G>A
  hgvsp: ENSP00000408172.1:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.260G>A
  hgvsp: ENSP00000386717.3:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.260G>A
  hgvsp: ENSP00000386737.1:p.Arg87Gln
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg87Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

2-101622454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622454
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622454
    reference: chr 2
allele count: 2
allele frequency: 1.654752449033625e-5
allele num: 120864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1702C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.267C>T
  hgvsp: ENST00000409650.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.267C>T
  hgvsp: ENST00000409028.4:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.267C>T
  hgvsp: ENST00000409733.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.267C>T
  hgvsp: ENST00000456292.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.267C>T
  hgvsp: ENST00000409320.3:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*105C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.267C>T
  hgvsp: ENST00000264258.3:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.230C>T
  hgvsp: ENST00000441435.1:c.230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.267C>T
  hgvsp: ENST00000409038.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser89Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

2-101622469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622469
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622469
    reference: chr 2
allele count: 3
allele frequency: 2.481676951838923e-5
allele num: 120886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.282G>A
  hgvsp: ENST00000456292.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.282G>A
  hgvsp: ENST00000409650.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1717G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.282G>A
  hgvsp: ENST00000264258.3:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.245G>A
  hgvsp: ENST00000441435.1:c.245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.282G>A
  hgvsp: ENST00000409320.3:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.282G>A
  hgvsp: ENST00000409733.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*120G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.282G>A
  hgvsp: ENST00000409038.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.282G>A
  hgvsp: ENST00000409028.4:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu94Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-101622484-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622484
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622484
    reference: chr 2
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.297A>G
  hgvsp: ENST00000409028.4:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.297A>G
  hgvsp: ENST00000409733.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1732A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.297A>G
  hgvsp: ENST00000409650.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.260A>G
  hgvsp: ENST00000441435.1:c.260A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.297A>G
  hgvsp: ENST00000409320.3:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.297A>G
  hgvsp: ENST00000409038.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.297A>G
  hgvsp: ENST00000456292.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.297A>G
  hgvsp: ENST00000264258.3:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*135A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro99Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-101622490-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622490
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622490
    reference: chr 2
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.303G>A
  hgvsp: ENST00000409320.3:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.303G>A
  hgvsp: ENST00000264258.3:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.303G>A
  hgvsp: ENST00000409733.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.266G>A
  hgvsp: ENST00000441435.1:c.266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.303G>A
  hgvsp: ENST00000409028.4:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1738G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.303G>A
  hgvsp: ENST00000409650.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.303G>A
  hgvsp: ENST00000456292.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.303G>A
  hgvsp: ENST00000409038.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*141G>A
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys101Lys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

2-101622491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622491
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622491
    reference: chr 2
allele count: 15
allele frequency: 1.244400199104032e-4
allele num: 120540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.304C>T
  hgvsp: ENST00000409038.1:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.304C>T
  hgvsp: ENST00000409650.1:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.304C>T
  hgvsp: ENST00000409320.3:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1739C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.267C>T
  hgvsp: ENST00000441435.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.304C>T
  hgvsp: ENST00000409028.4:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.304C>T
  hgvsp: ENST00000456292.1:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.304C>T
  hgvsp: ENST00000264258.3:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.304C>T
  hgvsp: ENST00000409733.1:c.304C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*142C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39290
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu102Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

2-101622498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622498
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622498
    reference: chr 2
allele count: 1
allele frequency: 8.329446258412741e-6
allele num: 120056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1746C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.311C>T
  hgvsp: ENSP00000386737.1:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.311C>T
  hgvsp: ENSP00000386271.1:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.311C>T
  hgvsp: ENSP00000264258.3:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.311C>T
  hgvsp: ENSP00000387163.3:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.311C>T
  hgvsp: ENSP00000386681.1:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*149C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.311C>T
  hgvsp: ENSP00000412976.1:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.274C>T
  hgvsp: ENSP00000408172.1:p.Thr92Ile
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.311C>T
  hgvsp: ENSP00000386717.3:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr104Ile
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-101622522-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622522
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622522
    reference: chr 2
allele count: 133
allele frequency: 1.138991179241243e-3
allele num: 116770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.335C>A
  hgvsp: ENSP00000412976.1:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.335C>A
  hgvsp: ENSP00000264258.3:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.298C>A
  hgvsp: ENSP00000408172.1:p.Thr100Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1770C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.335C>A
  hgvsp: ENSP00000386271.1:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.335C>A
  hgvsp: ENSP00000387163.3:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.335C>A
  hgvsp: ENSP00000386737.1:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.335C>A
  hgvsp: ENSP00000386717.3:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.335C>A
  hgvsp: ENSP00000386681.1:p.Thr112Asn
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*173C>A
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34930
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 13111
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr112Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

2-101622529-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622529
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622529
    reference: chr 2
allele count: 1
allele frequency: 8.730269590724962e-6
allele num: 114544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.342C>G
  hgvsp: ENSP00000386271.1:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.342C>G
  hgvsp: ENSP00000387163.3:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.342C>G
  hgvsp: ENSP00000386681.1:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.342C>G
  hgvsp: ENSP00000386717.3:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000412976
  ensembl transcript: ENST00000456292
  gene symbol: RPL31
  hgvsc: ENST00000456292.1:c.342C>G
  hgvsp: ENSP00000412976.1:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.305C>G
  hgvsp: ENSP00000408172.1:p.Phe102Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.342C>G
  hgvsp: ENSP00000264258.3:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1777C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.342C>G
  hgvsp: ENSP00000386737.1:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*180C>G
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32305
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe114Leu
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

2-101622543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622543
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622543
    reference: chr 2
allele count: 1
allele frequency: 9.3722469024724e-6
allele num: 106698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.356C>T
  hgvsp: ENSP00000387163.3:p.Ser119Phe
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+10C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+10C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*194C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+10C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1791C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+10C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+10C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+10C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13936
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser119Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

2-101622549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622549
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622549
    reference: chr 2
allele count: 2
allele frequency: 1.977261492832427e-5
allele num: 101150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+16C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.362C>T
  hgvsp: ENSP00000387163.3:p.Pro121Leu
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+16C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+16C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+16C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*200C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1797C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+16C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+16C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro121Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

2-101622550-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622550
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622550
    reference: chr 2
allele count: 1
allele frequency: 9.873422720720365e-6
allele num: 101282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*201A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+17A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+17A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.363A>G
  hgvsp: ENST00000409320.3:c.363A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+17A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+17A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+17A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+17A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1798A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17339
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro121Pro
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-101622552-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622552
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622552
    reference: chr 2
allele count: 1
allele frequency: 1.022473978037259e-5
allele num: 97802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+19A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+19A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1800A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+19A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+19A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*203A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+19A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.365A>C
  hgvsp: ENSP00000387163.3:p.Ter122SerextTer20
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+19A>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ter122SerextTer20
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

2-101622561-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622561
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622561
    reference: chr 2
allele count: 1
allele frequency: 1.077957916522939e-5
allele num: 92768
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+28T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+28T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+28T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+28T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*8T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+28T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*212T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1809T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+28T>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19881
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15446
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

2-101622568-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622568
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622568
    reference: chr 2
allele count: 2
allele frequency: 2.239491187602177e-5
allele num: 89306
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+35A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*15A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*219A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+35A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+35A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+35A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1816A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+35A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+35A>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8305
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-101622572-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622572
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622572
    reference: chr 2
allele count: 1
allele frequency: 1.144190942584499e-5
allele num: 87398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+39G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+39G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*19G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1820G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+39G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+39G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*223G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+39G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+39G>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

2-101622578-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622578
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622578
    reference: chr 2
allele count: 1
allele frequency: 1.1883541295306e-5
allele num: 84150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1826T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+45T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*25T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+45T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+45T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+45T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+45T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*229T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+45T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3988
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-101622581-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622581
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622581
    reference: chr 2
allele count: 1
allele frequency: 1.212826856837918e-5
allele num: 82452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+48C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*28C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+48C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+48C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1829C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*232C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+48C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+48C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+48C>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4388
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5392
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

2-101622584-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622584
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622584
    reference: chr 2
allele count: 4
allele frequency: 4.977105315548477e-5
allele num: 80368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+51T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+51T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1832T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+51T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+51T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+51T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*31T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*235T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+51T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21040
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6524
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

2-101622586-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622586
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622586
    reference: chr 2
allele count: 1
allele frequency: 1.269776773243264e-5
allele num: 78754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+53C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+53C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1834C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+53C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+53C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+53C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+53C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*33C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*237C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20911
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5054
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

2-101622593-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622593
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622593
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 75478
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*40A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1841A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+60A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+60A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+60A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+60A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+60A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*244A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+60A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17832
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3066
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

2-101622601-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622601
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622602
    reference: chr 2
allele count: 1
allele frequency: 1.390047261606895e-5
allele num: 71940
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+70dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*254dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.346+70dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+70dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*1851dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.346+70dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*50dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+70dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+70dupT
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19237
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6235
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/2-101622787-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622787
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622787
    reference: chr 2
allele count: 1
allele frequency: 8.328752519447637e-6
allele num: 120066
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+254A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.347-25A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*438A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2035A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+254A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.347-25A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+254A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*234A>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+254A>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19983
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4401
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

2-101622794-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622794
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622795
    reference: chr 2
allele count: 1
allele frequency: 8.324315325064513e-6
allele num: 120130
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.347-17dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+262dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.347-17dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*446dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+262dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*242dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+262dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2043dupT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+262dupT
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

2-101622798-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622798
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622799
    reference: chr 2
allele count: 1
allele frequency: 8.323345318950592e-6
allele num: 120144
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*246dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.347-13dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+266dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*450dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+266dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+266dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2047dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.347-13dupA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+266dupA
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

2-101622801-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622801
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622801
    reference: chr 2
allele count: 2
allele frequency: 1.664253499092982e-5
allele num: 120174
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.347-11T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2049T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*452T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+268T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.347-11T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*248T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+268T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+268T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+268T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7108
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

2-101622816-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622816
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622816
    reference: chr 2
allele count: 1
allele frequency: 8.325008325008325e-6
allele num: 120120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+283A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.351A>G
  hgvsp: ENST00000409733.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+283A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+283A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*263A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.351A>G
  hgvsp: ENST00000264258.3:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*467A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+283A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2064A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25266
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4397
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu117Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-101622820-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622820
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622820
    reference: chr 2
allele count: 2
allele frequency: 1.665445340083938e-5
allele num: 120088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+287A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2068A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*471A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+287A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*267A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.355A>T
  hgvsp: ENSP00000264258.3:p.Thr119Ser
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.355A>T
  hgvsp: ENSP00000386681.1:p.Thr119Ser
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+287A>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+287A>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20323
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr119Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

2-101622822-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622822
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622822
    reference: chr 2
allele count: 2
allele frequency: 1.66602802259134e-5
allele num: 120046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.357A>G
  hgvsp: ENST00000409733.1:c.357A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+289A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+289A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*473A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2070A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+289A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*269A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.357A>G
  hgvsp: ENST00000264258.3:c.357A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+289A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25292
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7169
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr119Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

2-101622827-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622827
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622827
    reference: chr 2
allele count: 1
allele frequency: 8.337919188887221e-6
allele num: 119934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+294A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+294A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387112
  ensembl transcript: ENST00000409711
  gene symbol: RPL31
  hgvsc: ENST00000409711.1:c.*2075A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+294A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.362A>G
  hgvsp: ENSP00000386681.1:p.Asn121Ser
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+294A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*274A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.362A>G
  hgvsp: ENSP00000264258.3:p.Asn121Ser
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*478A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn121Ser
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-101622837-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622837
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622837
    reference: chr 2
allele count: 1
allele frequency: 8.371283150281276e-6
allele num: 119456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+304G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.372G>C
  hgvsp: ENSP00000386681.1:p.Glu124Asp
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+304G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+304G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.372G>C
  hgvsp: ENSP00000264258.3:p.Glu124Asp
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*488G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*284G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+304G>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4388
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu124Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

2-101622844-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622844
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622844
    reference: chr 2
allele count: 1
allele frequency: 8.420485356775965e-6
allele num: 118758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+311T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*1T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*291T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*495T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+311T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*1T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+311T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+311T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2941
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-101622845-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622845
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622845
    reference: chr 2
allele count: 1
allele frequency: 8.425025696328374e-6
allele num: 118694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*2C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*496C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+312C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+312C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+312C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*292C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+312C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*2C>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-101622846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622846
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622846
    reference: chr 2
allele count: 4
allele frequency: 3.370180641682394e-5
allele num: 118688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+313G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*497G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*293G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*3G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+313G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+313G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+313G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*3G>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17544
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24874
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD

2-101622847-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622847
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622847
    reference: chr 2
allele count: 1
allele frequency: 8.432129787341686e-6
allele num: 118594
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+314C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*498C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*294C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+314C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*4C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*4C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+314C>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+314C>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39263
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4383
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

2-101622849-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622849
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622849
    reference: chr 2
allele count: 1
allele frequency: 8.466826971924002e-6
allele num: 118108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+316G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+316G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*6G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+316G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+316G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*6G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*296G>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*500G>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-101622852-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622852
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622852
    reference: chr 2
allele count: 10
allele frequency: 8.480757161999423e-5
allele num: 117914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*9C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*503C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+319C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+319C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+319C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*299C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+319C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15979
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37141
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/2-101622852-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622852
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622852
    reference: chr 2
allele count: 2
allele frequency: 1.696151432399885e-5
allele num: 117914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+319C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*503C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*9C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+319C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*299C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*9C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+319C>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+319C>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4311
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

2-101622853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622853
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622853
    reference: chr 2
allele count: 5
allele frequency: 4.244914592318402e-5
allele num: 117788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+320G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*10G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+320G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+320G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*504G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+320G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*300G>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15734
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6316
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

2-101622853-GTCAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622853
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622848
    reference: chr 2
allele count: 1
allele frequency: 8.489829184636805e-6
allele num: 117788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+324_346+328delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+324_309+328delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*14_*18delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+324_346+328delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*508_*512delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*14_*18delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*304_*308delGATCA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+324_346+328delGATCA
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23773
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4378
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: GTCAGA
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-101622857-GATCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622857
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622853
    reference: chr 2
allele count: 1
allele frequency: 8.520064752492119e-6
allele num: 117370
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+326_346+329delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+326_309+329delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*306_*309delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*510_*513delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*16_*19delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*16_*19delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+326_346+329delTCAA
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+326_346+329delTCAA
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6062
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35037
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: GATCA
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-101622859-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622859
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622859
    reference: chr 2
allele count: 1
allele frequency: 8.536793580331227e-6
allele num: 117140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*16T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*16T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+326T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+326T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*306T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+326T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*510T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+326T>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22164
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-101622859-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622859
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622859
    reference: chr 2
allele count: 1
allele frequency: 8.536793580331227e-6
allele num: 117140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*16T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+326T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+326T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*306T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*16T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+326T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+326T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*510T>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

2-101622861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622861
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622861
    reference: chr 2
allele count: 1
allele frequency: 8.552417768503155e-6
allele num: 116926
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+328A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*512A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*18A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*308A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+328A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*18A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+328A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+328A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21498
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5768
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

2-101622872-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622872
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622872
    reference: chr 2
allele count: 1
allele frequency: 8.614303189015041e-6
allele num: 116086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*523T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*29T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+339T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*319T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+339T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+339T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+339T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*29T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

2-101622872-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622872
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622872
    reference: chr 2
allele count: 2
allele frequency: 1.722860637803008e-5
allele num: 116086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+339T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+339T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*29T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*319T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*29T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+339T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+339T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*523T>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

2-101622873-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622873
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622873
    reference: chr 2
allele count: 1
allele frequency: 8.610891055006372e-6
allele num: 116132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+340A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+340A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*320A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*524A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*30A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+340A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*30A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+340A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5661
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3295
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

2-101622878-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622878
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622878
    reference: chr 2
allele count: 2
allele frequency: 1.733372623112791e-5
allele num: 115382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+345T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+345T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000387163
  ensembl transcript: ENST00000409320
  gene symbol: RPL31
  hgvsc: ENST00000409320.3:c.*325T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+345T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386681
  ensembl transcript: ENST00000409733
  gene symbol: RPL31
  hgvsc: ENST00000409733.1:c.*35T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*529T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+345T>C
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*35T>C
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12999
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3920
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7638
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4440
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

2-101622885-A-ATGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622885
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622889
    reference: chr 2
allele count: 1
allele frequency: 8.753041681984489e-6
allele num: 114246
alternate allele: ATGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+354_309+357dupGTTT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*44_*47dupGTTT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+354_346+357dupGTTT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+354_346+357dupGTTT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+354_346+357dupGTTT
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4836
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7581
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4368
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

2-101622885-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622885
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622885
    reference: chr 2
allele count: 2
allele frequency: 1.750608336396898e-5
allele num: 114246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+352A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+352A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+352A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000402450
  ensembl transcript: ENST00000419276
  gene symbol: RPL31
  hgvsc: ENST00000419276.1:c.*536A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*42A>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+352A>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14600
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9498
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7581
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4836
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

2-101622888-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622888
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622888
    reference: chr 2
allele count: 1
allele frequency: 8.955598144400065e-6
allele num: 111662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+355T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+355T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+355T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+355T>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*45T>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5036
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8944
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5583
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4366
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

2-101622889-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622889
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622889
    reference: chr 2
allele count: 1
allele frequency: 8.941024999105897e-6
allele num: 111844
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+356T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*46T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+356T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+356T>G
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+356T>G
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14122
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8405
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5580
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4367
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8952
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

2-101622893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622893
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622893
    reference: chr 2
allele count: 1
allele frequency: 9.168255831010708e-6
allele num: 109072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+360G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+360G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+360G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+360G>A
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*50G>A
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17349
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

2-101622893-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622893
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622893
    reference: chr 2
allele count: 2
allele frequency: 1.833651166202142e-5
allele num: 109072
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+360G>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+360G>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*50G>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+360G>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+360G>T
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17349
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

2-101622894-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101622894
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101622892
    reference: chr 2
allele count: 1
allele frequency: 9.136759008844382e-6
allele num: 109448
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+363_346+364delCT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+363_346+364delCT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+363_346+364delCT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+363_309+364delCT
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000264258
  ensembl transcript: ENST00000264258
  gene symbol: RPL31
  hgvsc: ENST00000264258.3:c.*53_*54delCT
  variant of: http://identifiers.org/hgnc/10334
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14105
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4548
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4242
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7365
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8852
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: TTC
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-101624235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 101624235
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 101624235
    reference: chr 2
allele count: 5
allele frequency: 4.37368789363191e-5
allele num: 114320
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204634
  ensembl protein: ENSP00000366036
  ensembl transcript: ENST00000376840
  gene symbol: TBC1D8
  hgvsc: ENST00000376840.4:c.*48G>A
  variant of: http://identifiers.org/hgnc/17791
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386737
  ensembl transcript: ENST00000409038
  gene symbol: RPL31
  hgvsc: ENST00000409038.1:c.346+1702C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386271
  ensembl transcript: ENST00000409650
  gene symbol: RPL31
  hgvsc: ENST00000409650.1:c.346+1702C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000386717
  ensembl transcript: ENST00000409028
  gene symbol: RPL31
  hgvsc: ENST00000409028.4:c.346+1702C>T
  variant of: http://identifiers.org/hgnc/10334
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204634
  ensembl protein: ENSP00000386856
  ensembl transcript: ENST00000409318
  gene symbol: TBC1D8
  hgvsc: ENST00000409318.1:c.*48G>A
  variant of: http://identifiers.org/hgnc/17791
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000071082
  ensembl protein: ENSP00000408172
  ensembl transcript: ENST00000441435
  gene symbol: RPL31
  hgvsc: ENST00000441435.1:c.309+1702C>T
  variant of: http://identifiers.org/hgnc/10334
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4944
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41486
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
reference allele: C

GenotypeQuality
all individuals: 5261
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 309
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7074
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23419
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2335
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.722059583261581e-5
allele num: 58070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15160
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 4.58e-1

DP
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SIO_000300: 1.288329e6

MQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.993e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.58e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10890
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8700
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.097359567743908e-5
allele num: 58854
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15254
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

FS
type: SiteQuality
SIO_000300: 8.916e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

InbreedingCoeff
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SIO_000300: -1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.972e-1

ClippingRankSum
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SIO_000300: -6.13e-1

BaseQRankSum
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SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: -1.102e0

DP
type: SiteQuality
SIO_000300: 1.332614e6

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.677345768056627e-5
allele num: 59618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10952
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.641e0

DP
type: SiteQuality
SIO_000300: 1.374188e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

QD
type: SiteQuality
SIO_000300: 1.07e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.997501249375312e-5
allele num: 60030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

DP
type: SiteQuality
SIO_000300: 1.392017e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

MQ
type: SiteQuality
SIO_000300: 5.487e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 1.533e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.662289304830613e-5
allele num: 60158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.094216078574027e-5
allele num: 10996
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.403562e6

QD
type: SiteQuality
SIO_000300: 6.97e0

FS
type: SiteQuality
SIO_000300: 1.0563e1

VQSLOD
type: SiteQuality
SIO_000300: -1.629e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.665e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.262004175365344e-5
allele num: 61312
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
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SIO_000300: -5.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 1.218e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

DP
type: SiteQuality
SIO_000300: 1.446926e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 12
allele frequency: 1.282873636946761e-3
allele num: 9354
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62622
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

South Asian
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allele count: 0
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allele num: 15732
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

ClippingRankSum
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DP
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MQ
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BaseQRankSum
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SIO_000300: 3.12e0

ReadPosRankSum
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SIO_000300: 3.72e-1

MQRankSum
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InbreedingCoeff
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SIO_000300: -5.0e-4

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.587e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63116
num of homozygotes: 0

African
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allele count: 7
allele frequency: 7.416825598643781e-4
allele num: 9438
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.830801836806782e-5
allele num: 11324
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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FS
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QD
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DP
type: SiteQuality
SIO_000300: 1.503033e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

African
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allele frequency: 1.057753331922996e-4
allele num: 9454
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63260
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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BaseQRankSum
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QD
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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SIO_000300: -2.09e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.266449429753102e-5
allele num: 15958
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63918
num of homozygotes: 0

DP
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -3.0e-4

QD
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FS
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SIO_000300: 2.896e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.205e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65386
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
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SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 4.054e0

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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DP
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BaseQRankSum
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SIO_000300: 2.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10082
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.572783e6

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
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SIO_000300: -1.474e0

InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
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allele count: 69
allele frequency: 1.042075693962002e-3
allele num: 66214
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European (Finnish)
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allele count: 4
allele frequency: 6.064281382656155e-4
allele num: 6596
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South Asian
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African
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allele count: 2
allele frequency: 1.974723538704581e-4
allele num: 10128
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MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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SIO_000300: 5.968e1

VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.510072181450273e-5
allele num: 66222
num of homozygotes: 0

ReadPosRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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African
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.009510051763573e-5
allele num: 66456
num of homozygotes: 0

South Asian
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Other
type: Population
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African
type: Population
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.515080368430558e-5
allele num: 66444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.583176e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

MQ
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SIO_000300: 5.889e1

VQSLOD
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SIO_000300: -5.484e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

FS
type: SiteQuality
SIO_000300: 2.139e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.063e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508204633204633e-5
allele num: 66304
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

MQRankSum
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SIO_000300: -1.024e0

MQ
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SIO_000300: 5.945e1

DP
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InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -1.395e-1

FS
type: SiteQuality
SIO_000300: 1.569e0

QD
type: SiteQuality
SIO_000300: 1.591e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.63e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66200
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
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allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.149e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.21e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.104e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.955e0

DP
type: SiteQuality
SIO_000300: 1.579464e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2964
bin: 9.75e1
variant carriers: 15

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.268292682926829e-3
allele num: 10250
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66174
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.91e-2

DP
type: SiteQuality
SIO_000300: 1.579226e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

FS
type: SiteQuality
SIO_000300: 5.35e-1

BaseQRankSum
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SIO_000300: -2.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 135
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51851064475962e-5
allele num: 65854
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.409e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.428e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -2.472e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.057169061449098e-4
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
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allele count: 126
allele frequency: 1.975850713501647e-3
allele num: 63770
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.271165182490907e-5
allele num: 15946
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008878127522195e-4
allele num: 9912
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.763668430335097e-4
allele num: 11340
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.996e0

MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 6.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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East Asian
type: Population
allele count: 1
allele frequency: 1.227897838899803e-4
allele num: 8144
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.954e0

DP
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MQRankSum
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QD
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InbreedingCoeff
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MQ
type: SiteQuality
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VQSLOD
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ClippingRankSum
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SIO_000300: -2.79e-1

FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57926
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 6.696129637069774e-5
allele num: 14934
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.365418e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.72e-1

FS
type: SiteQuality
SIO_000300: 1.1099e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.916e0

MQ
type: SiteQuality
SIO_000300: 5.86e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.821958240717123e-5
allele num: 54886
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.246882793017456e-3
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8670
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.264e-1

DP
type: SiteQuality
SIO_000300: 1.273215e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
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SIO_000300: 1.318e1

FS
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SIO_000300: 2.228e0

BaseQRankSum
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SIO_000300: -3.809e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.05e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6080
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6716
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.903216899074968e-5
allele num: 14486
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

BaseQRankSum
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SIO_000300: 1.66e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.188e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.46e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.890573600030249e-5
allele num: 52894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.465e1

MQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

FS
type: SiteQuality
SIO_000300: 2.866e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

DP
type: SiteQuality
SIO_000300: 1.211552e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.997283694175921e-5
allele num: 50068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

MQ
type: SiteQuality
SIO_000300: 5.609e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.089e0

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

DP
type: SiteQuality
SIO_000300: 1.130328e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5522
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Other
type: Population
allele count: 1
allele frequency: 1.373626373626374e-3
allele num: 728
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
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Latino
type: Population
allele count: 1
allele frequency: 1.21654501216545e-4
allele num: 8220
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47964
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.005e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7986
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46868
num of homozygotes: 0

European (Finnish)
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East Asian
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South Asian
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African
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allele num: 7542
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Other
type: Population
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FS
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
type: SiteQuality
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.227369921596579e-5
allele num: 44896
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Latino
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5012
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5552
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MQ
type: SiteQuality
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MQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43968
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 7.76156473144986e-5
allele num: 12884
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Other
type: Population
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5508
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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FS
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QD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2934
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 5.591277606933184e-4
allele num: 7154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

DP
type: SiteQuality
SIO_000300: 9.67033e5

VQSLOD
type: SiteQuality
SIO_000300: -5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

FS
type: SiteQuality
SIO_000300: 3.808e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

QD
type: SiteQuality
SIO_000300: 8.380000000000001e0

GenotypeQuality
all individuals: 5335
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.388573066450103e-5
allele num: 41866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5364
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

FS
type: SiteQuality
SIO_000300: 5.809e0

DP
type: SiteQuality
SIO_000300: 9.57985e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.129e0

MQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.972e-1

QD
type: SiteQuality
SIO_000300: 1.39e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

MQ
type: SiteQuality
SIO_000300: 5.718e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 220
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variant carriers: 0

GenotypeQuality
all individuals: 4011
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6708
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.011e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 9.32096e5

GenotypeQuality
all individuals: 1433
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4095
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.633242047609016e-5
allele num: 37976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5088
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

QD
type: SiteQuality
SIO_000300: 1.427e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.22566e5

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 138
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509798592867711e-5
allele num: 66234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.839057e6

MQRankSum
type: SiteQuality
SIO_000300: 8.32e-1

FS
type: SiteQuality
SIO_000300: 1.097e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.392e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.36e-1

GenotypeQuality
all individuals: 290
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
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GenotypeQuality
all individuals: 7207
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41456
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GenotypeQuality
all individuals: 1600
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.36e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

DP
type: SiteQuality
SIO_000300: 1.846363e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509980974239725e-5
allele num: 66226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15970
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.848738e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.996e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.405e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019597185735423e-5
allele num: 66234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.379e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

DP
type: SiteQuality
SIO_000300: 1.851019e6

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

QD
type: SiteQuality
SIO_000300: 1.287e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.853343e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-5
allele num: 66120
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.219679064560268e-5
allele num: 16078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.852958e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

FS
type: SiteQuality
SIO_000300: 1.085e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.87e-1

QD
type: SiteQuality
SIO_000300: 7.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -5.891e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512950859356088e-5
allele num: 66096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.223549912870301e-5
allele num: 16068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.852296e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.4e0

QD
type: SiteQuality
SIO_000300: 1.004e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.146e0

FS
type: SiteQuality
SIO_000300: 6.605e0

MQ
type: SiteQuality
SIO_000300: 5.87e1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514325519413653e-5
allele num: 66036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.465e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

DP
type: SiteQuality
SIO_000300: 1.850502e6

QD
type: SiteQuality
SIO_000300: 4.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.801e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

MQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.735150244584206e-5
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.840505e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 2.355e0

MQRankSum
type: SiteQuality
SIO_000300: -1.013e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

QD
type: SiteQuality
SIO_000300: 1.672e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.758e0

VQSLOD
type: SiteQuality
SIO_000300: -5.971e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530502923260583e-5
allele num: 65338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.414e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.395e0

QD
type: SiteQuality
SIO_000300: 1.034e1

DP
type: SiteQuality
SIO_000300: 1.816826e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 6759
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65300
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.330716637123322e-5
allele num: 15796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.817279e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.76e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.189e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.532928064842959e-4
allele num: 15792
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

DP
type: SiteQuality
SIO_000300: 1.817038e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.69e-2

FS
type: SiteQuality
SIO_000300: 1.075e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

VQSLOD
type: SiteQuality
SIO_000300: 5.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532848953064165e-5
allele num: 65238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.811663e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

FS
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.256e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.216e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.095e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 185
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GenotypeQuality
all individuals: 723
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64966
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.926e0

QD
type: SiteQuality
SIO_000300: 1.956e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.099e0

DP
type: SiteQuality
SIO_000300: 1.791929e6

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 4388
bin: 9.75e1
variant carriers: 10

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6401
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.762114537444934e-4
allele num: 11350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.233539951275172e-4
allele num: 64854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-2

QD
type: SiteQuality
SIO_000300: 1.264e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 1.784336e6

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.08384987818793e-5
allele num: 64854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-2

QD
type: SiteQuality
SIO_000300: 1.264e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.784336e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4378
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.763357432551578e-4
allele num: 11342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.628915290850178e-5
allele num: 64810
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

DP
type: SiteQuality
SIO_000300: 1.778013e6

MQ
type: SiteQuality
SIO_000300: 5.86e1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

FS
type: SiteQuality
SIO_000300: 2.002e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.897e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.156e1

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6316
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36725
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variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 258
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variant carriers: 0

GenotypeQuality
all individuals: 4540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
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variant carriers: 0

GenotypeQuality
all individuals: 438
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variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

MQ
type: SiteQuality
SIO_000300: 5.86e1

FS
type: SiteQuality
SIO_000300: 2.002e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.897e0

DP
type: SiteQuality
SIO_000300: 1.778013e6

QD
type: SiteQuality
SIO_000300: 1.156e1

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
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variant carriers: 0

GenotypeQuality
all individuals: 5475
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variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 451
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 0

GenotypeQuality
all individuals: 278
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variant carriers: 0

GenotypeQuality
all individuals: 1246
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.837044892188053e-5
allele num: 11316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.62e0

MQRankSum
type: SiteQuality
SIO_000300: -2.636e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

DP
type: SiteQuality
SIO_000300: 1.750743e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.116e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.602e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

GenotypeQuality
all individuals: 255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5934
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variant carriers: 0

GenotypeQuality
all individuals: 299
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 637
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GenotypeQuality
all individuals: 1816
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4373
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.469142191745374e-5
allele num: 15458
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.06e0

QD
type: SiteQuality
SIO_000300: 1.359e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 1.476e0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 1.729163e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5934
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551831160769708e-5
allele num: 64440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.359e1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.729163e6

FS
type: SiteQuality
SIO_000300: 1.476e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

GenotypeQuality
all individuals: 338
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
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variant carriers: 0

GenotypeQuality
all individuals: 6660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
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GenotypeQuality
all individuals: 1193
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4372
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 445
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variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.482561908466225e-5
allele num: 15426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 1.711052e6

GenotypeQuality
all individuals: 141
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
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variant carriers: 0

GenotypeQuality
all individuals: 555
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variant carriers: 0

GenotypeQuality
all individuals: 246
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GenotypeQuality
all individuals: 633
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GenotypeQuality
all individuals: 3299
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variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4373
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4514
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565239168544954e-5
allele num: 63888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

QD
type: SiteQuality
SIO_000300: 1.408e1

FS
type: SiteQuality
SIO_000300: 1.055e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.596558e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9001
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.369668246445498e-4
allele num: 8440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 1.055e0

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

DP
type: SiteQuality
SIO_000300: 1.596558e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

QD
type: SiteQuality
SIO_000300: 1.408e1

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4371
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 632
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564994209521425e-5
allele num: 63898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-1

QD
type: SiteQuality
SIO_000300: 1.623e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.375e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

DP
type: SiteQuality
SIO_000300: 1.595654e6

GenotypeQuality
all individuals: 4371
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9513
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 206
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 5461
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575051189163648e-5
allele num: 63490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007049345417925e-4
allele num: 9930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

FS
type: SiteQuality
SIO_000300: 3.724e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 1.523585e6

QD
type: SiteQuality
SIO_000300: 1.443e1

GenotypeQuality
all individuals: 2874
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9498
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variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8768
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590786166523496e-5
allele num: 62862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.462739e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.571e1

GenotypeQuality
all individuals: 2772
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
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variant carriers: 0

GenotypeQuality
all individuals: 8768
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
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variant carriers: 0

GenotypeQuality
all individuals: 876
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variant carriers: 0

GenotypeQuality
all individuals: 4368
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variant carriers: 2

GenotypeQuality
all individuals: 11027
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.352082206598161e-4
allele num: 14792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.462739e6

VQSLOD
type: SiteQuality
SIO_000300: 5.15e0

QD
type: SiteQuality
SIO_000300: 1.571e1

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 8467
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 236
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GenotypeQuality
all individuals: 8282
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.629832453223809e-5
allele num: 61356
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.161e0

QD
type: SiteQuality
SIO_000300: 3.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 1.429362e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

VQSLOD
type: SiteQuality
SIO_000300: -1.078e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
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GenotypeQuality
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GenotypeQuality
all individuals: 894
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variant carriers: 0

GenotypeQuality
all individuals: 691
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.626968632044774e-5
allele num: 61464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.926e0

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 1.428485e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.596e1

GenotypeQuality
all individuals: 4283
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.194244604316547e-5
allele num: 13900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59836
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.799e0

DP
type: SiteQuality
SIO_000300: 1.420614e6

FS
type: SiteQuality
SIO_000300: 4.649e0

QD
type: SiteQuality
SIO_000300: 1.154e1

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1490
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GenotypeQuality
all individuals: 4369
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.194244604316547e-5
allele num: 13900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.67123470820242e-5
allele num: 59836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 1.154e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.799e0

FS
type: SiteQuality
SIO_000300: 4.649e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.420614e6

GenotypeQuality
all individuals: 4368
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1381
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variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60042
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.175660160734788e-5
allele num: 13936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.51e0

QD
type: SiteQuality
SIO_000300: 8.25e0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 1.420373e6

MQ
type: SiteQuality
SIO_000300: 6.077e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

GenotypeQuality
all individuals: 1019
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variant carriers: 0

GenotypeQuality
all individuals: 163
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GenotypeQuality
all individuals: 6637
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GenotypeQuality
all individuals: 1305
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GenotypeQuality
all individuals: 1829
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GenotypeQuality
all individuals: 339
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GenotypeQuality
all individuals: 693
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.074463506118183e-5
allele num: 65052
num of homozygotes: 0