1-156390100-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390100
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390100
    reference: chr 1
allele count: 8
allele frequency: 2.802494219855671e-4
allele num: 28546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6490C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5555C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1247C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5555C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1247C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5555C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1247C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3444C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5555C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.29C>T
  hgvsp: ENST00000368242.3:c.29C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5555C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1247C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1247C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489918
  gene symbol: C1orf61
  hgvsc: ENST00000489918.1:n.11C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5555C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1247C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5555C>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13784
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31437
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly10Gly
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

1-156390104-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390104
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390103
    reference: chr 1
allele count: 1
allele frequency: 3.39420270178535e-5
allele num: 29462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1242delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6485delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5560delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5560delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5560delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1242delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5560delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5560delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1242delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489918
  gene symbol: C1orf61
  hgvsc: ENST00000489918.1:n.6delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.24delG
  hgvsp: ENSP00000357225.3:p.Ala9ProfsTer118
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1242delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1242delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5560delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1242delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3449delG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5560delG
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12693
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala9ProfsTer118
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: GC
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-156390105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390105
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390105
    reference: chr 1
allele count: 3
allele frequency: 1.005833836250251e-4
allele num: 29826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1242G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5560G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6485G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1242G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5560G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5560G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3449G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1242G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1242G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5560G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1242G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5560G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1242G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.24G>A
  hgvsp: ENSP00000357225.3:p.Ala9Thr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5560G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489918
  gene symbol: C1orf61
  hgvsc: ENST00000489918.1:n.6G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5560G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala9Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

1-156390108-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390108
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390109
    reference: chr 1
allele count: 1
allele frequency: 3.291855948383698e-5
allele num: 30378
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.20dupG
  hgvsp: ENSP00000357225.3:p.Lys8GlufsTer12
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1238dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489918
  gene symbol: C1orf61
  hgvsc: ENST00000489918.1:n.2dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6481dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1238dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1238dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1238dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1238dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5564dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3453dupG
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1238dupG
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys8GlufsTer12
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

1-156390109-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390109
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390109
    reference: chr 1
allele count: 3
allele frequency: 9.854805860324551e-5
allele num: 30442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1238G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489918
  gene symbol: C1orf61
  hgvsc: ENST00000489918.1:n.2G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3453G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1238G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.20G>A
  hgvsp: ENST00000368242.3:c.20G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1238G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6481G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1238G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1238G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5564G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1238G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6916
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32883
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly7Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-156390111-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390111
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390111
    reference: chr 1
allele count: 1
allele frequency: 3.224766204450177e-5
allele num: 31010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.18G>A
  hgvsp: ENSP00000357225.3:p.Gly7Arg
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1236G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1236G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1236G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6479G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3455G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1236G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1236G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5566G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1236G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly7Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

1-156390114-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390114
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390114
    reference: chr 1
allele count: 1
allele frequency: 3.1207090250905e-5
allele num: 32044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1233C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5569C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5569C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6476C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5569C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5569C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1233C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357225
  ensembl transcript: ENST00000368242
  gene symbol: C1orf61
  hgvsc: ENST00000368242.3:c.15C>G
  hgvsp: ENSP00000357225.3:p.Pro6Ala
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5569C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3458C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1233C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1233C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1233C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1233C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5569C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5569C>G
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro6Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

1-156390130-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390130
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390130
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 34756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5585C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5585C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1217C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5585C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3474C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5585C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1217C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1217C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1217C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207933
  ensembl transcript: ENST00000385198
  gene symbol: MIR9-1
  hgvsc: ENST00000385198.2:n.8G>T
  variant of: http://identifiers.org/hgnc/31641
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5585C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6460C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5585C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1217C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1217C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5585C>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-156390147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390147
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390147
    reference: chr 1
allele count: 1
allele frequency: 2.947939390366134e-5
allele num: 33922
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5602G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207933
  ensembl transcript: ENST00000385198
  gene symbol: MIR9-1
  hgvsc: ENST00000385198.2:n.25C>T
  variant of: http://identifiers.org/hgnc/31641
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1200G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3491G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1200G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1200G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1200G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5602G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1200G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5602G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6443G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5602G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5602G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1200G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5602G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5602G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31337
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-156390175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390175
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390175
    reference: chr 1
allele count: 1
allele frequency: 3.421376762009033e-5
allele num: 29228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1172G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1172G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1172G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3519G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5630G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1172G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207933
  ensembl transcript: ENST00000385198
  gene symbol: MIR9-1
  hgvsc: ENST00000385198.2:n.53C>T
  variant of: http://identifiers.org/hgnc/31641
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1172G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1172G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6415G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21051
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-156390176-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390176
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390176
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 28890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1171G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6414G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207933
  ensembl transcript: ENST00000385198
  gene symbol: MIR9-1
  hgvsc: ENST00000385198.2:n.54C>T
  variant of: http://identifiers.org/hgnc/31641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1171G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1171G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5631G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3520G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1171G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1171G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1171G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22446
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-156390177-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390177
    reference: chr 1
allele count: 1
allele frequency: 3.449703325514005e-5
allele num: 28988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1170T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5632T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207933
  ensembl transcript: ENST00000385198
  gene symbol: MIR9-1
  hgvsc: ENST00000385198.2:n.55A>T
  variant of: http://identifiers.org/hgnc/31641
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5632T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5632T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1170T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5632T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3521T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1170T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1170T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6413T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5632T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1170T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1170T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5632T>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5632T>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-156390218-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390218
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390218
    reference: chr 1
allele count: 1
allele frequency: 5.054078641463661e-5
allele num: 19786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1129G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1129G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3562G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207933
  ensembl transcript: ENST00000385198
  gene symbol: MIR9-1
  hgvsc: ENST00000385198.2:n.96C>A
  variant of: http://identifiers.org/hgnc/31641
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1129G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5673G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1129G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1129G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6372G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1129G>T
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

1-156390262-G-GGCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156390262
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156390265
    reference: chr 1
allele count: 1
allele frequency: 7.016559079427449e-5
allele num: 14252
alternate allele: GGCC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000464203
  gene symbol: C1orf61
  hgvsc: ENST00000464203.1:n.255+1082_255+1084dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.102-5720_102-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000463309
  gene symbol: C1orf61
  hgvsc: ENST00000463309.1:n.202+1082_202+1084dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.114-5720_114-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.76-5720_76-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+6325_123+6327dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.280-5720_280-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000486517
  gene symbol: C1orf61
  hgvsc: ENST00000486517.1:n.198+1082_198+1084dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-25-3609_-25-3607dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497822
  gene symbol: C1orf61
  hgvsc: ENST00000497822.1:n.204+1082_204+1084dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.100-5720_100-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.130-5720_130-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000465270
  gene symbol: C1orf61
  hgvsc: ENST00000465270.1:n.198+1082_198+1084dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.111-5720_111-5718dupGGC
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000482932
  gene symbol: C1orf61
  hgvsc: ENST00000482932.1:n.202+1082_202+1084dupGGC
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28122
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-156396543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396543
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396543
    reference: chr 1
allele count: 3
allele frequency: 1.83060776177691e-4
allele num: 16388
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-26+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.75+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.113+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.279+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.99+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.165G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.543+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.101+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.129+47G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.110+47G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/1-156396549-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396549
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396549
    reference: chr 1
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-26+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.129+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.543+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.110+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.159G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.279+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.99+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.75+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.101+41G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.113+41G>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-156396565-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396565
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396565
    reference: chr 1
allele count: 1
allele frequency: 6.023370678231538e-5
allele num: 16602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.99+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-26+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.543+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.129+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.101+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.279+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.110+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.75+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.143T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.123+25T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.113+25T>C
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

1-156396602-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396602
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396602
    reference: chr 1
allele count: 1
allele frequency: 5.883045064125191e-5
allele num: 16998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.106T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-38T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.111T>C
  hgvsp: ENSP00000383776.2:p.Leu38Pro
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.267T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.98T>C
  hgvsp: ENSP00000350661.4:p.Leu33Pro
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.63T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.101T>C
  hgvsp: ENSP00000310651.5:p.Leu34Pro
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.89T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.531T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.87T>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.117T>C
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu34Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-156396615-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396615
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396615
    reference: chr 1
allele count: 9
allele frequency: 5.257623554153522e-4
allele num: 17118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.98G>A
  hgvsp: ENSP00000383776.2:p.Val34Ile
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.85G>A
  hgvsp: ENSP00000350661.4:p.Val29Ile
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.76G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.50G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.93G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.74G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.104G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-51G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.254G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.88G>A
  hgvsp: ENSP00000310651.5:p.Val30Ile
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.518G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val30Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

1-156396626-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396626
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396626
    reference: chr 1
allele count: 1
allele frequency: 5.826147751106968e-5
allele num: 17164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.93C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.63C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.39C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.82C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.507C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.87C>A
  hgvsp: ENSP00000383776.2:p.Ser30Tyr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.74C>A
  hgvsp: ENSP00000350661.4:p.Ser25Tyr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.243C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.77C>A
  hgvsp: ENSP00000310651.5:p.Ser26Tyr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-62C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.65C>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser26Tyr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

1-156396645-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396645
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396645
    reference: chr 1
allele count: 1
allele frequency: 5.850690381465013e-5
allele num: 17092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.46A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.44A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.488A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.55A>C
  hgvsp: ENSP00000350661.4:p.Lys19Gln
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.224A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.74A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-81A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.68A>C
  hgvsp: ENSP00000383776.2:p.Lys24Gln
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.63A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.20A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.58A>C
  hgvsp: ENSP00000310651.5:p.Lys20Gln
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys20Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-156396657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396657
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396657
    reference: chr 1
allele count: 1
allele frequency: 5.871301080319399e-5
allele num: 17032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.34G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.43G>A
  hgvsp: ENSP00000350661.4:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.212G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.46G>A
  hgvsp: ENSP00000310651.5:p.Ala16Thr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-93G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.32G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000471156
  gene symbol: C1orf61
  hgvsc: ENST00000471156.1:n.8G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.56G>A
  hgvsp: ENSP00000383776.2:p.Ala20Thr
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.476G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.62G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.51G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala16Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

1-156396678-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396678
    reference: chr 1
allele count: 4
allele frequency: 2.363507445048452e-4
allele num: 16924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.39-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.469-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.36-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.205-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.25-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.49-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.44-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-100-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.27-14C>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.55-14C>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

1-156396707-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156396707
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156396707
    reference: chr 1
allele count: 2
allele frequency: 1.200768491834774e-4
allele num: 16656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.36-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.44-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.25-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.49-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.205-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.39-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-100-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.469-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.55-43A>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.27-43A>C
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

1-156399146-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399146
    reference: chr 1
allele count: 4
allele frequency: 2.763576067431256e-4
allele num: 14474
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-101+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.38+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.468+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.24+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.35+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.54+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.48+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.26+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.204+22G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.43+22G>C
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum

1-156399148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399148
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399148
    reference: chr 1
allele count: 1
allele frequency: 6.907985631389887e-5
allele num: 14476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.48+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.24+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.204+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.35+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-101+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.468+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.43+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.38+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.54+20C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.26+20C>T
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

1-156399153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399153
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399153
    reference: chr 1
allele count: 4
allele frequency: 2.763194252555955e-4
allele num: 14476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.54+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.204+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.35+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.468+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.38+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.24+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.26+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.48+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.43+15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-101+15G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

1-156399157-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399157
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399157
    reference: chr 1
allele count: 11
allele frequency: 7.589347316130813e-4
allele num: 14494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.38+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.26+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-101+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.35+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.43+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.48+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.54+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.204+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.24+11A>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.468+11A>T
  variant of: http://identifiers.org/hgnc/30780
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

1-156399181-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399181
    reference: chr 1
allele count: 2
allele frequency: 1.378169790518192e-4
allele num: 14512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.455C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.22C>T
  hgvsp: ENSP00000350661.4:p.Leu8Phe
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000357226
  ensembl transcript: ENST00000368243
  gene symbol: C1orf61
  hgvsc: ENST00000368243.1:c.-114C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.191C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.35C>T
  hgvsp: ENSP00000383776.2:p.Leu13Phe
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000484428
  gene symbol: C1orf61
  hgvsc: ENST00000484428.1:n.13C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.41C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.30C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.25C>T
  hgvsp: ENSP00000310651.5:p.Leu9Phe
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000489877
  gene symbol: C1orf61
  hgvsc: ENST00000489877.1:n.11C>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu8Phe
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

1-156399195-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399195
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399195
    reference: chr 1
allele count: 3
allele frequency: 2.068394925537783e-4
allele num: 14504
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.11A>G
  hgvsp: ENSP00000310651.5:p.Glu4Gly
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.8A>G
  hgvsp: ENSP00000350661.4:p.Glu3Gly
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.27A>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.16A>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.21A>G
  hgvsp: ENSP00000383776.2:p.Glu8Gly
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.177A>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.441A>G
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu3Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-156399196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399196
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399196
    reference: chr 1
allele count: 1
allele frequency: 6.898454746136865e-5
allele num: 14496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.7G>A
  hgvsp: ENSP00000350661.4:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.26G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.10G>A
  hgvsp: ENSP00000310651.5:p.Glu4Lys
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.20G>A
  hgvsp: ENSP00000383776.2:p.Glu8Lys
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.440G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.15G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.176G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu3Lys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-156399197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399197
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399197
    reference: chr 1
allele count: 3
allele frequency: 2.06953642384106e-4
allele num: 14496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.439C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.25C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000310651
  ensembl transcript: ENST00000310027
  gene symbol: C1orf61
  hgvsc: ENST00000310027.5:c.9C>T
  hgvsp: ENST00000310027.5:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000350661
  ensembl transcript: ENST00000357975
  gene symbol: C1orf61
  hgvsc: ENST00000357975.4:c.6C>T
  hgvsp: ENST00000357975.4:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.19C>T
  hgvsp: ENST00000400991.2:c.19C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.175C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000495000
  gene symbol: C1orf61
  hgvsc: ENST00000495000.1:n.14C>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3451
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro2Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

1-156399211-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399211
    reference: chr 1
allele count: 1
allele frequency: 6.902263942573165e-5
allele num: 14488
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.161C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.425C>G
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000125462
  ensembl protein: ENSP00000383776
  ensembl transcript: ENST00000400991
  gene symbol: C1orf61
  hgvsc: ENST00000400991.2:c.5C>G
  hgvsp: ENSP00000383776.2:p.Pro3Ala
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000476966
  gene symbol: C1orf61
  hgvsc: ENST00000476966.1:n.11C>G
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro3Ala
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-156399231-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399231
    reference: chr 1
allele count: 1
allele frequency: 6.906077348066299e-5
allele num: 14480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.141G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.405G>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 460
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-156399231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399231
    reference: chr 1
allele count: 7
allele frequency: 4.834254143646409e-4
allele num: 14480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.405G>A
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.141G>A
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 7
  allele frequency: 9.135995823544767e-4
  allele num: 7662
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/1-156399232-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399232
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399232
    reference: chr 1
allele count: 1
allele frequency: 6.910850034554251e-5
allele num: 14470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.140G>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.404G>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 878
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-156399232-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399232
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399232
    reference: chr 1
allele count: 1
allele frequency: 6.910850034554251e-5
allele num: 14470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.140G>C
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.404G>C
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.305483028720627e-4
  allele num: 7660
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

1-156399256-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156399256
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156399256
    reference: chr 1
allele count: 1
allele frequency: 6.936736958934517e-5
allele num: 14416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000497824
  gene symbol: C1orf61
  hgvsc: ENST00000497824.1:n.116C>T
  variant of: http://identifiers.org/hgnc/30780
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000125462
  ensembl transcript: ENST00000469813
  gene symbol: C1orf61
  hgvsc: ENST00000469813.1:n.380C>T
  variant of: http://identifiers.org/hgnc/30780
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 26
  num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-156437396-A-ACT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437396
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437398
    reference: chr 1
allele count: 1
allele frequency: 9.082652134423252e-6
allele num: 110100
alternate allele: ACT
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*39_*40dupAG
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*39_*40dupAG
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*39_*40dupAG
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*39_*40dupAG
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*39_*40dupAG
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*39_*40dupAG
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9332
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-156437407-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437407
    reference: chr 1
allele count: 3
allele frequency: 2.724597667744397e-5
allele num: 110108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*30C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*30C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*30C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*30C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4345
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

1-156437412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437412
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437412
    reference: chr 1
allele count: 1
allele frequency: 9.081992225814654e-6
allele num: 110108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*25C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*25C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*25C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*25C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*25C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*25C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4870
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

1-156437414-TGAGAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437414
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437409
    reference: chr 1
allele count: 1
allele frequency: 9.082652134423252e-6
allele num: 110100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*18_*22delCTCTC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*18_*22delCTCTC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*18_*22delCTCTC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*18_*22delCTCTC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*18_*22delCTCTC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*18_*22delCTCTC
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26904
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9350
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: TGAGAG
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-156437417-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437417
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437417
    reference: chr 1
allele count: 1
allele frequency: 9.083642177167357e-6
allele num: 110088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*20C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*20C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*20C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*20C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*20C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*20C>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26807
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9331
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

1-156437423-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437423
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437423
    reference: chr 1
allele count: 1
allele frequency: 9.083477155054955e-6
allele num: 110090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*14C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*14C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*14C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*798C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*14C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9322
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ

1-156437424-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437424
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437424
    reference: chr 1
allele count: 1
allele frequency: 9.083147128817192e-6
allele num: 110094
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*13C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*13C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*13C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*13C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*797C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*13C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*13C>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4866
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27001
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-156437425-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437425
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437425
    reference: chr 1
allele count: 1
allele frequency: 9.084467377677646e-6
allele num: 110078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*12C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*796C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*12C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*12C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*12C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*12C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*12C>A
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-156437436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437436
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437436
    reference: chr 1
allele count: 1
allele frequency: 9.088926052497636e-6
allele num: 110024
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.*1C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.*1C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.*1C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.*1C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*785C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.*1C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.*1C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4284
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-156437443-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437443
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437443
    reference: chr 1
allele count: 17
allele frequency: 1.546101096822308e-4
allele num: 109954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1539A>G
  hgvsp: ENST00000360595.3:c.1539A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1539A>G
  hgvsp: ENST00000368240.2:c.1539A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1422A>G
  hgvsp: ENST00000353795.3:c.1422A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1557A>G
  hgvsp: ENST00000340875.5:c.1557A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1536A>G
  hgvsp: ENST00000464356.2:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1560A>G
  hgvsp: ENST00000348159.4:c.1560A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*778A>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4857
  bin: 9.75e1
  variant carriers: 15
hgvs: p.Leu520Leu
num of homozygotes: 1
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD

1-156437446-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437446
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437446
    reference: chr 1
allele count: 1
allele frequency: 9.097194425239256e-6
allele num: 109924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*775A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1554A>G
  hgvsp: ENST00000340875.5:c.1554A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1533A>G
  hgvsp: ENST00000464356.2:c.1533A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1536A>G
  hgvsp: ENST00000368240.2:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1536A>G
  hgvsp: ENST00000360595.3:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1557A>G
  hgvsp: ENST00000348159.4:c.1557A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1419A>G
  hgvsp: ENST00000353795.3:c.1419A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1557A>G
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-156437453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437453
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437453
    reference: chr 1
allele count: 1
allele frequency: 9.108629515603082e-6
allele num: 109786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-5C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-5C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-5C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-5C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-5C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-5C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-5C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3422
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1555-5C>T
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

1-156437460-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437460
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437460
    reference: chr 1
allele count: 1
allele frequency: 9.12009338975631e-6
allele num: 109648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-12C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-12C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-12C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-12C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-12C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-12C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-12C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4219
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-156437465-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437465
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437465
    reference: chr 1
allele count: 1
allele frequency: 9.13191971216189e-6
allele num: 109506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-17A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-17A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-17A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-17A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-17A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-17A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-17A>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17782
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-156437470-AAGGGGGTGTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437470
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437460
    reference: chr 1
allele count: 1
allele frequency: 9.137259918495641e-6
allele num: 109442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15546
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4806
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8838
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: AAGGGGGTGTG
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-156437475-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437475
    reference: chr 1
allele count: 1
allele frequency: 9.159522239319997e-6
allele num: 109176
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-27C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-27C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-27C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-27C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-27C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-27C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-27C>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3030
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7035
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

1-156437476-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437476
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437476
    reference: chr 1
allele count: 1
allele frequency: 9.163551059306502e-6
allele num: 109128
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-28C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-28C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-28C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-28C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-28C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-28C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-28C>A
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13848
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4746
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-156437477-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437477
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437477
    reference: chr 1
allele count: 1
allele frequency: 9.175995595522114e-6
allele num: 108980
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-29A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-29A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-29A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-29A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-29A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-29A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-29A>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6990
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1878
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-156437481-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437481
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437482
    reference: chr 1
allele count: 3
allele frequency: 2.765282796253964e-5
allele num: 108488
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-34dupC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-34dupC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-34dupC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-34dupC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-34dupC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-34dupC
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-34dupC
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15692
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1492
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4713
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

1-156437482-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437482
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437482
    reference: chr 1
allele count: 1
allele frequency: 9.18982502573151e-6
allele num: 108816
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-34C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-34C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-34C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-34C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-34C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-34C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-34C>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

1-156437484-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437484
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437484
    reference: chr 1
allele count: 1
allele frequency: 9.207594423880816e-6
allele num: 108606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-36C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-36C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-36C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-36C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-36C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-36C>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-36C>A
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13649
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3830
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

1-156437485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437485
    reference: chr 1
allele count: 6
allele frequency: 5.525981322183131e-5
allele num: 108578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-37C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-37C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-37C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-37C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-37C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-37C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-37C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12113
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13694
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5994
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-156437485-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437485
    reference: chr 1
allele count: 2
allele frequency: 1.841993774061044e-5
allele num: 108578
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-37C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-37C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-37C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-37C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-37C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-37C>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-37C>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13694
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5994
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-156437490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437490
    reference: chr 1
allele count: 6
allele frequency: 5.575586365832807e-5
allele num: 107612
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-42G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-42G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-42G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-42G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-42G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-42G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-42G>A
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9074
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11835
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5259
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4648
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3600
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16874
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-156437499-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437499
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437499
    reference: chr 1
allele count: 1
allele frequency: 9.493070058857035e-6
allele num: 105340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1552-51A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1417-51A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*773-51A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1534-51A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1555-51A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1531-51A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1534-51A>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4610
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4293
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-156437728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437728
    reference: chr 1
allele count: 3
allele frequency: 2.720940356987375e-5
allele num: 110256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+57C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+57C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+57C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+57C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+57C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+57C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+57C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13799
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4127
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

1-156437729-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437729
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437729
    reference: chr 1
allele count: 1
allele frequency: 9.069472156720479e-6
allele num: 110260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+56C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+56C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+56C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+56C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+56C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+56C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+56C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

1-156437738-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437738
    reference: chr 1
allele count: 9
allele frequency: 8.140818061761673e-5
allele num: 110554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+47G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+47G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+47G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+47G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+47G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+47G>A
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+47G>A
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31451
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

1-156437739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437739
    reference: chr 1
allele count: 1
allele frequency: 9.043063066321825e-6
allele num: 110582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+46A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+46A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+46A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+46A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+46A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+46A>G
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+46A>G
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8645
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

1-156437744-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437744
    reference: chr 1
allele count: 7
allele frequency: 6.320427622074545e-5
allele num: 110752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+41C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+41C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+41C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+41C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+41C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+41C>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+41C>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2530
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4102
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-156437754-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437754
    reference: chr 1
allele count: 1044
allele frequency: 9.376515600581991e-3
allele num: 111342
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+31G>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+31G>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+31G>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+31G>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+31G>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+31G>T
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+31G>T
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 23359
  bin: 2.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 13802
  bin: 3.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 3.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32208
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4387
  bin: 9.75e1
  variant carriers: 998
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 41
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

1-156437762-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 156437762
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 156437762
    reference: chr 1
allele count: 1
allele frequency: 8.936071345593623e-6
allele num: 111906
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000353803
  ensembl transcript: ENST00000360595
  gene symbol: MEF2D
  hgvsc: ENST00000360595.3:c.1533+23G>C
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000271555
  ensembl transcript: ENST00000348159
  gene symbol: MEF2D
  hgvsc: ENST00000348159.4:c.1554+23G>C
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000357223
  ensembl transcript: ENST00000368240
  gene symbol: MEF2D
  hgvsc: ENST00000368240.2:c.1533+23G>C
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000343159
  ensembl transcript: ENST00000340875
  gene symbol: MEF2D
  hgvsc: ENST00000340875.5:c.1551+23G>C
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000344705
  ensembl transcript: ENST00000353795
  gene symbol: MEF2D
  hgvsc: ENST00000353795.3:c.1416+23G>C
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000476788
  ensembl transcript: ENST00000464356
  gene symbol: MEF2D
  hgvsc: ENST00000464356.2:c.1530+23G>C
  variant of: http://identifiers.org/hgnc/6997
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116604
  ensembl protein: ENSP00000477413
  ensembl transcript: ENST00000475587
  gene symbol: MEF2D
  hgvsc: ENST00000475587.2:c.*772+23G>C
  variant of: http://identifiers.org/hgnc/6997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 2654
bin: 1.25e1
variant carriers: 6

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6275
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3918
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13429
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 702
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 9201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 30060
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3320
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.04040404040404e-3
allele num: 990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 3.231017770597738e-4
allele num: 12380
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.78e-2

DP
type: SiteQuality
SIO_000300: 5.78382e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.58e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 4.993e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeDepth
all individuals: 3919
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32101
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6488
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 943
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2888
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9370
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30721
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1971
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12397
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12832
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.524886877828054e-4
allele num: 2210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1006
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.107e1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.058e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 5.89838e5

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2857
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6600
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 588
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 725
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12153
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.339285714285714e-3
allele num: 2240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.39e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.969e0

FS
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 5.93146e5

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

GenotypeDepth
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 922
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2922
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11468
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31858
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.150747986191024e-4
allele num: 8690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.141e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.461e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.28e-2

DP
type: SiteQuality
SIO_000300: 6.01003e5

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3932
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11493
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 927
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 585
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31652
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11263
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 600
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.491424310216256e-4
allele num: 13410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.821670428893905e-4
allele num: 3544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.228e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.03293e5

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.27e-2

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 586
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 926
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3958
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10827
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3592
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.208754208754209e-4
allele num: 2376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.19e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.299e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

QD
type: SiteQuality
SIO_000300: 5.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

DP
type: SiteQuality
SIO_000300: 6.08943e5

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 557
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3098
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 33429
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33056
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2548
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.25689404934688e-4
allele num: 1378
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.444e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 6.18178e5

VQSLOD
type: SiteQuality
SIO_000300: -2.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.954e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.038e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3797
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33521
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 9002
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8954
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34208
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11151
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 6.39428e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.059e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.82e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5155
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3787
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11488
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9417
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.50110518788194e-5
allele num: 15382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.08554e5

QD
type: SiteQuality
SIO_000300: 1.027e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.497e0

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.25e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4992
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3431
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5043
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21557
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 717
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22853
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12890
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.812319538017325e-4
allele num: 2078
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.20299e5

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

FS
type: SiteQuality
SIO_000300: 1.0458e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.96e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.986e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 454
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 831
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21584
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3415
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4960
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 714
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7732
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22318
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22098
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

QD
type: SiteQuality
SIO_000300: 1.234e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.16124e5

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4967
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3416
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22517
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12740
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.152073732718894e-4
allele num: 8680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.04e-2

QD
type: SiteQuality
SIO_000300: 1.229e1

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.05e0

VQSLOD
type: SiteQuality
SIO_000300: -3.781e-1

DP
type: SiteQuality
SIO_000300: 5.15407e5

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-1

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 742
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32774
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1754
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32070
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.404494382022472e-3
allele num: 712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.61589e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.197e0

QD
type: SiteQuality
SIO_000300: 9.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.759999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.84e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

GenotypeDepth
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 873
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2400
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8653
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20392
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 62
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.540832049306626e-4
allele num: 6490
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.28897e5

VQSLOD
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQ
type: SiteQuality
SIO_000300: 5.79e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

FS
type: SiteQuality
SIO_000300: 1.196e0

QD
type: SiteQuality
SIO_000300: 1.509e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.422e0

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 906
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.628517823639775e-4
allele num: 5330
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.641e0

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.9e0

DP
type: SiteQuality
SIO_000300: 2.88519e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.92e-2

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

GenotypeQuality
all individuals: 173
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2895
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.869158878504673e-4
allele num: 5350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.78e-2

DP
type: SiteQuality
SIO_000300: 2.91596e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.967e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.206e0

MQRankSum
type: SiteQuality
SIO_000300: -6.18e-1

FS
type: SiteQuality
SIO_000300: 8.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.747e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.564e1

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1724
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5408
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.424657534246575e-3
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 956
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.768e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: -2.092e0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.415e0

MQ
type: SiteQuality
SIO_000300: 5.834e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.24e-2

DP
type: SiteQuality
SIO_000300: 2.97617e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4041
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5670
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.765625e-4
allele num: 1024
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

FS
type: SiteQuality
SIO_000300: 7.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 3.04763e5

MQ
type: SiteQuality
SIO_000300: 5.885e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

VQSLOD
type: SiteQuality
SIO_000300: -3.91e-2

QD
type: SiteQuality
SIO_000300: 1.289e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

GenotypeQuality
all individuals: 460
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.386962552011096e-3
allele num: 5768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.031363088057901e-4
allele num: 1658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

DP
type: SiteQuality
SIO_000300: 3.06173e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

FS
type: SiteQuality
SIO_000300: 1.117e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.024e1

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4064
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.304461257500652e-4
allele num: 7666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.775e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.662e0

QD
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 3.06524e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

FS
type: SiteQuality
SIO_000300: 3.05e0

VQSLOD
type: SiteQuality
SIO_000300: -5.336e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.15e-2

GenotypeQuality
all individuals: 232
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.73550850399167e-4
allele num: 5762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e0

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-2

FS
type: SiteQuality
SIO_000300: 5.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.077e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e0

DP
type: SiteQuality
SIO_000300: 3.05882e5

QD
type: SiteQuality
SIO_000300: 1.264e1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5724
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.304461257500652e-4
allele num: 7666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.086e0

VQSLOD
type: SiteQuality
SIO_000300: -1.233e0

DP
type: SiteQuality
SIO_000300: 3.05156e5

FS
type: SiteQuality
SIO_000300: 5.501e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.299e0

QD
type: SiteQuality
SIO_000300: 1.207e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 702
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.227391531625719e-4
allele num: 7652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.03052e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.293e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.505e0

QD
type: SiteQuality
SIO_000300: 1.306e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.78e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.272e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.369e0

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 439
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.424657534246575e-3
allele num: 292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.838911364472232e-4
allele num: 5438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 988
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.892e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.53e-1

DP
type: SiteQuality
SIO_000300: 2.919e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.18e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.13e0

QD
type: SiteQuality
SIO_000300: 1.834e1

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 801
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5004
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.221932114882506e-4
allele num: 7660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.31e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.879e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.077e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

DP
type: SiteQuality
SIO_000300: 2.43548e5

FS
type: SiteQuality
SIO_000300: 5.301e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 370
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.305483028720627e-4
allele num: 7660
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.24e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

FS
type: SiteQuality
SIO_000300: 1.659e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.451e0

DP
type: SiteQuality
SIO_000300: 2.43529e5

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.451e0

GenotypeQuality
all individuals: 640
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 1
allele frequency: 1.305483028720627e-4
allele num: 7660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.52112676056338e-3
allele num: 284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.992015968063872e-4
allele num: 5010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

DP
type: SiteQuality
SIO_000300: 2.44389e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.19e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.483e1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3388
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.991238550378335e-3
allele num: 5022
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.305142260506395e-4
allele num: 7662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.03e-2

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 1.368e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

DP
type: SiteQuality
SIO_000300: 2.44934e5

GenotypeQuality
all individuals: 310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.310344827586207e-3
allele num: 464
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.195e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.83e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.95e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.4544e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 391
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.378378378378379e-3
allele num: 888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -8.667e-1

QD
type: SiteQuality
SIO_000300: 7.93e0

DP
type: SiteQuality
SIO_000300: 2.44963e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.07e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.52112676056338e-3
allele num: 284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.04e-2

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 1.635e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.623e0

QD
type: SiteQuality
SIO_000300: 1.329e1

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.552e0

DP
type: SiteQuality
SIO_000300: 2.44851e5

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.91644908616188e-4
allele num: 7660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.08e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.436e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 1.164e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.45137e5

GenotypeQuality
all individuals: 1471
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.995211492418196e-4
allele num: 5012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.135e1

DP
type: SiteQuality
SIO_000300: 2.44064e5

VQSLOD
type: SiteQuality
SIO_000300: -7.975e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

FS
type: SiteQuality
SIO_000300: 4.157e0

MQRankSum
type: SiteQuality
SIO_000300: -1.227e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.88e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 1
allele frequency: 1.305142260506395e-4
allele num: 7662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.862e0

FS
type: SiteQuality
SIO_000300: 2.023e0

QD
type: SiteQuality
SIO_000300: 1.089e1

DP
type: SiteQuality
SIO_000300: 2.43243e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.862e0

FS
type: SiteQuality
SIO_000300: 2.023e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.43243e5

QD
type: SiteQuality
SIO_000300: 1.089e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.305483028720627e-4
allele num: 7660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.54e-1

FS
type: SiteQuality
SIO_000300: 8.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.574e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 2.43036e5

QD
type: SiteQuality
SIO_000300: 1.28e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.43036e5

MQRankSum
type: SiteQuality
SIO_000300: 9.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

FS
type: SiteQuality
SIO_000300: 8.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -4.574e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.30718954248366e-4
allele num: 7650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4982
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.39854e5

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

FS
type: SiteQuality
SIO_000300: 3.142e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.768e-1

QD
type: SiteQuality
SIO_000300: 1.29e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.095e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4879
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

QD
type: SiteQuality
SIO_000300: 1.217e1

DP
type: SiteQuality
SIO_000300: 1.816253e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.056e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
all individuals: 429
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4876
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.336298932384342e-4
allele num: 8992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.663e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.481e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 1.817321e6

VQSLOD
type: SiteQuality
SIO_000300: 6.63e-1

GenotypeQuality
all individuals: 9343
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26865
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.174812030075188e-4
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63796
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.396e0

MQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 1.817743e6

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: -4.774e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.59e-1

QD
type: SiteQuality
SIO_000300: 8.52e0

GenotypeQuality
all individuals: 221
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4869
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567643831321524e-5
allele num: 63790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.169e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.337e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 7.36e0

QD
type: SiteQuality
SIO_000300: 6.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

DP
type: SiteQuality
SIO_000300: 1.81783e6

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4334
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.112594570538496e-4
allele num: 8988
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.917e0

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.817469e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

GenotypeQuality
all individuals: 1089
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4865
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1089
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567840456555141e-5
allele num: 63782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.586e0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

DP
type: SiteQuality
SIO_000300: 1.817539e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 9.718e0

QD
type: SiteQuality
SIO_000300: 8.359999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.503e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeQuality
all individuals: 1083
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.5600624024961e-4
allele num: 6410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 5.908e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -1.426e0

MQRankSum
type: SiteQuality
SIO_000300: -1.235e0

DP
type: SiteQuality
SIO_000300: 1.817314e6

FS
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 8.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

GenotypeQuality
all individuals: 4323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4865
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568037131119265e-5
allele num: 63774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.486e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.3e-1

QD
type: SiteQuality
SIO_000300: 4.92e0

FS
type: SiteQuality
SIO_000300: 3.005e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 1.817311e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-2

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4858
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27041
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9270
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8974
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.815885e6

QD
type: SiteQuality
SIO_000300: 1.39e1

FS
type: SiteQuality
SIO_000300: 1.707e0

MQRankSum
type: SiteQuality
SIO_000300: -1.126e0

VQSLOD
type: SiteQuality
SIO_000300: -9.678e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

MQ
type: SiteQuality
SIO_000300: 5.631e1

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2687
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9253
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.726248391450362e-4
allele num: 63722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.42507068803016e-4
allele num: 6366
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.813806e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 2.484e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

QD
type: SiteQuality
SIO_000300: 1.334e1

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4839
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1404
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4272
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569760140650509e-5
allele num: 63704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

QD
type: SiteQuality
SIO_000300: 1.058e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

DP
type: SiteQuality
SIO_000300: 1.811813e6

VQSLOD
type: SiteQuality
SIO_000300: -4.56e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4828
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571240022625856e-5
allele num: 63644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.107e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.782e1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.889e0

DP
type: SiteQuality
SIO_000300: 1.80357e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 25795
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9078
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4821
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573118550213944e-5
allele num: 63568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 3.082e1

DP
type: SiteQuality
SIO_000300: 1.794129e6

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4816
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.574555188159345e-5
allele num: 63510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

QD
type: SiteQuality
SIO_000300: 9.52e0

FS
type: SiteQuality
SIO_000300: 3.837e0

DP
type: SiteQuality
SIO_000300: 1.785353e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2606
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.916699722332408e-5
allele num: 10084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.898e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 4.902e1

FS
type: SiteQuality
SIO_000300: 2.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 6.48e0

DP
type: SiteQuality
SIO_000300: 1.767861e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e-1

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4747
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3242
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63334
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177301624676242e-4
allele num: 8494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

FS
type: SiteQuality
SIO_000300: 6.019e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.705817e6

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.767e-1

GenotypeQuality
all individuals: 1250
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23514
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579679009225326e-5
allele num: 63304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.884e0

DP
type: SiteQuality
SIO_000300: 1.704213e6

QD
type: SiteQuality
SIO_000300: 1.267e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.604e0

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

GenotypeQuality
all individuals: 23618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4739
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581577781995318e-5
allele num: 63228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.381e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 1.569e0

DP
type: SiteQuality
SIO_000300: 1.702671e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.43e-1

QD
type: SiteQuality
SIO_000300: 5.26e0

GenotypeQuality
all individuals: 1523
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6765
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8828
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.005409737527549e-4
allele num: 9982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 8.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e0

FS
type: SiteQuality
SIO_000300: 1.081e0

MQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

DP
type: SiteQuality
SIO_000300: 1.685598e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 693
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3391
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6822
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4715
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583380834758376e-5
allele num: 63156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.992e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

DP
type: SiteQuality
SIO_000300: 1.679354e6

GenotypeQuality
all individuals: 1018
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2288
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4701
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.002204850671477e-4
allele num: 9978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6168
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.639712e6

GenotypeQuality
all individuals: 1024
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4702
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 975
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.171280880347572e-5
allele num: 63066
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.529204164460914e-4
allele num: 11334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.738e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 1.637621e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

FS
type: SiteQuality
SIO_000300: 2.713e0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

GenotypeQuality
all individuals: 680
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4702
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1237
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.133529811834051e-4
allele num: 8822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585640440173786e-5
allele num: 63066
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

FS
type: SiteQuality
SIO_000300: 2.713e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.738e0

DP
type: SiteQuality
SIO_000300: 1.637621e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

GenotypeQuality
all individuals: 4115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3763
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.597850081581725e-5
allele num: 62514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

FS
type: SiteQuality
SIO_000300: 7.247e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

DP
type: SiteQuality
SIO_000300: 1.590369e6

QD
type: SiteQuality
SIO_000300: 8.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.044e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 992
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4102
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1852
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3434
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.631694024736481e-5
allele num: 61286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.606e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.72e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

FS
type: SiteQuality
SIO_000300: 6.544e0

DP
type: SiteQuality
SIO_000300: 1.5273e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeQuality
all individuals: 1123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 884
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.032520325203252e-4
allele num: 9840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62620
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.199616122840691e-4
allele num: 8336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.664e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 2.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.708197e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 3.368e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

GenotypeQuality
all individuals: 8603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596627921829097e-5
allele num: 62632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 1.708285e6

VQSLOD
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.415e0

QD
type: SiteQuality
SIO_000300: 1.028e1

FS
type: SiteQuality
SIO_000300: 2.636e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.434262948207171e-4
allele num: 62750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

QD
type: SiteQuality
SIO_000300: 1.502e1

DP
type: SiteQuality
SIO_000300: 1.713766e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.715e0

MQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

GenotypeQuality
all individuals: 474
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.199616122840691e-4
allele num: 8336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 1.714061e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.254e0

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 1.451e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

GenotypeQuality
all individuals: 8672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31877
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.961022832213483e-5
allele num: 62806
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.755001755001755e-4
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 3.331e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.071e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 1.718265e6

QD
type: SiteQuality
SIO_000300: 1.256e1

GenotypeQuality
all individuals: 233
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 356
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 745
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2502
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 720
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8638
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 753
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 849
bin: 9.25e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.396825396825396e-4
allele num: 63000
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 5.337128624799857e-4
allele num: 11242
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.722084367245658e-3
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 955
allele frequency: 9.605713136189901e-2
allele num: 9942
num of homozygotes: 41

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

Latino
type: Population
allele count: 46
allele frequency: 4.032965106084517e-3
allele num: 11406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

QD
type: SiteQuality
SIO_000300: 1.463e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 1.748868e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.22e-2

FS
type: SiteQuality
SIO_000300: 1.468e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.189e0

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0