1-145301712-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301712
    reference: chr 1
allele count: 2
allele frequency: 1.692505585268431e-5
allele num: 118168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*694-8T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1096-8T>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*694-8T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.176-8T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.989-8T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.176-8T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.989-8T>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48221
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: c.989-8T>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

1-145301713-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301713
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301713
    reference: chr 1
allele count: 1
allele frequency: 8.462384700008463e-6
allele num: 118170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*694-7T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.176-7T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.989-7T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*694-7T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1096-7T>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.989-7T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.176-7T>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48222
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55306
  bin: 9.75e1
  variant carriers: 1
hgvs: c.989-7T>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

1-145301714-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301714
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301714
    reference: chr 1
allele count: 4
allele frequency: 3.384839304754007e-5
allele num: 118174
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1096-6T>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.176-6T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*694-6T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.989-6T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.176-6T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.989-6T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*694-6T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48222
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
hgvs: c.989-6T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-145301715-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301715
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301715
    reference: chr 1
allele count: 1
allele frequency: 8.462098261885017e-6
allele num: 118174
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.989-5C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.176-5C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.989-5C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1096-5C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.176-5C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*694-5C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*694-5C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: c.989-5C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

1-145301716-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301716
    reference: chr 1
allele count: 475
allele frequency: 4.019972918077184e-3
allele num: 118160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.176-4T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1096-4T>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.176-4T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*694-4T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*694-4T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.989-4T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.989-4T>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48338
  bin: 9.75e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: c.989-4T>A
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-145301717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301717
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301717
    reference: chr 1
allele count: 1
allele frequency: 8.461955050094773e-6
allele num: 118176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*694-3C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1096-3C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.176-3C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*694-3C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.989-3C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.176-3C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.989-3C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48277
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: c.989-3C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

1-145301721-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301721
    reference: chr 1
allele count: 2
allele frequency: 1.692419652377003e-5
allele num: 118174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.177A>G
  hgvsp: ENST00000369339.3:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1097A>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.990A>G
  hgvsp: ENST00000342960.5:c.990A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.990A>G
  hgvsp: ENST00000490598.2:c.990A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*695A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*695A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.177A>G
  hgvsp: ENST00000369338.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48277
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: c.990A>G
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

1-145301723-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301723
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301723
    reference: chr 1
allele count: 1
allele frequency: 8.461668641056017e-6
allele num: 118180
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.992A>T
  hgvsp: ENSP00000345684.5:p.Tyr331Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.179A>T
  hgvsp: ENSP00000358345.2:p.Tyr60Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.992A>T
  hgvsp: ENSP00000474625.1:p.Tyr331Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*697A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1099A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.179A>T
  hgvsp: ENSP00000358344.1:p.Tyr60Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*697A>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48277
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55383
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr331Phe
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-145301724-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301724
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301724
    reference: chr 1
allele count: 1
allele frequency: 8.461955050094773e-6
allele num: 118176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.180T>G
  hgvsp: ENSP00000358345.2:p.Tyr60Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.180T>G
  hgvsp: ENSP00000358344.1:p.Tyr60Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*698T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*698T>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1100T>G
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.993T>G
  hgvsp: ENSP00000345684.5:p.Tyr331Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.993T>G
  hgvsp: ENSP00000474625.1:p.Tyr331Ter
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55381
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr331Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

1-145301730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301730
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301730
    reference: chr 1
allele count: 2
allele frequency: 1.692247812769702e-5
allele num: 118186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*704G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.999G>A
  hgvsp: ENST00000342960.5:c.999G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.186G>A
  hgvsp: ENST00000369338.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.186G>A
  hgvsp: ENST00000369339.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*704G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.999G>A
  hgvsp: ENST00000490598.2:c.999G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1106G>A
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48274
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55380
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 1
hgvs: p.Glu333Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

1-145301730-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301730
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301730
    reference: chr 1
allele count: 1
allele frequency: 8.46123906384851e-6
allele num: 118186
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1106G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.186G>C
  hgvsp: ENSP00000358345.2:p.Glu62Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.186G>C
  hgvsp: ENSP00000358344.1:p.Glu62Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.999G>C
  hgvsp: ENSP00000474625.1:p.Glu333Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*704G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.999G>C
  hgvsp: ENSP00000345684.5:p.Glu333Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*704G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48274
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu333Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-145301732-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301732
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301732
    reference: chr 1
allele count: 2
allele frequency: 1.692190540654878e-5
allele num: 118190
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1108G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.188G>T
  hgvsp: ENSP00000358344.1:p.Cys63Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*706G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.188G>T
  hgvsp: ENSP00000358345.2:p.Cys63Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1001G>T
  hgvsp: ENSP00000474625.1:p.Cys334Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1001G>T
  hgvsp: ENSP00000345684.5:p.Cys334Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*706G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48273
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55382
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys334Phe
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

1-145301733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301733
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301733
    reference: chr 1
allele count: 2
allele frequency: 1.692276450280918e-5
allele num: 118184
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1109C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*707C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.189C>T
  hgvsp: ENST00000369339.3:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1002C>T
  hgvsp: ENST00000342960.5:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1002C>T
  hgvsp: ENST00000490598.2:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*707C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.189C>T
  hgvsp: ENST00000369338.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55375
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys334Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

1-145301737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301737
    reference: chr 1
allele count: 1
allele frequency: 8.461382251404589e-6
allele num: 118184
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1113G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*711G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.193G>A
  hgvsp: ENSP00000358344.1:p.Asp65Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1006G>A
  hgvsp: ENSP00000345684.5:p.Asp336Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.193G>A
  hgvsp: ENSP00000358345.2:p.Asp65Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*711G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.3G>A
  hgvsp: ENSP00000474856.1:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1006G>A
  hgvsp: ENSP00000474625.1:p.Asp336Asn
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48273
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55380
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp336Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

1-145301737-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301737
    reference: chr 1
allele count: 1
allele frequency: 8.461382251404589e-6
allele num: 118184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.193G>C
  hgvsp: ENSP00000358345.2:p.Asp65His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1006G>C
  hgvsp: ENSP00000345684.5:p.Asp336His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.3G>C
  hgvsp: ENSP00000474856.1:p.Asp2His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1006G>C
  hgvsp: ENSP00000474625.1:p.Asp336His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*711G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.193G>C
  hgvsp: ENSP00000358344.1:p.Asp65His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1113G>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*711G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48273
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp336His
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

1-145301737-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301737
    reference: chr 1
allele count: 2
allele frequency: 1.692276450280918e-5
allele num: 118184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*711G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.3G>T
  hgvsp: ENSP00000474856.1:p.Asp2Tyr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*711G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1006G>T
  hgvsp: ENSP00000345684.5:p.Asp336Tyr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1113G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1006G>T
  hgvsp: ENSP00000474625.1:p.Asp336Tyr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.193G>T
  hgvsp: ENSP00000358344.1:p.Asp65Tyr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.193G>T
  hgvsp: ENSP00000358345.2:p.Asp65Tyr
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp336Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum

1-145301738-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301738
    reference: chr 1
allele count: 1
allele frequency: 8.461095881138525e-6
allele num: 118188
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1007A>G
  hgvsp: ENSP00000345684.5:p.Asp336Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.4A>G
  hgvsp: ENSP00000474856.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.194A>G
  hgvsp: ENSP00000358344.1:p.Asp65Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1007A>G
  hgvsp: ENSP00000474625.1:p.Asp336Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.194A>G
  hgvsp: ENSP00000358345.2:p.Asp65Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*712A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1114A>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*712A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 48272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp336Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

1-145301740-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301740
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301740
    reference: chr 1
allele count: 1
allele frequency: 8.461525443807009e-6
allele num: 118182
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1116C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.6C>T
  hgvsp: ENSP00000474856.1:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.196C>T
  hgvsp: ENSP00000358345.2:p.Leu66Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*714C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1009C>T
  hgvsp: ENSP00000474625.1:p.Leu337Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1009C>T
  hgvsp: ENSP00000345684.5:p.Leu337Phe
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*714C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.196C>T
  hgvsp: ENSP00000358344.1:p.Leu66Phe
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu337Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

1-145301744-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301744
    reference: chr 1
allele count: 1
allele frequency: 8.46510682964819e-6
allele num: 118132
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1013T>C
  hgvsp: ENSP00000345684.5:p.Ile338Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1013T>C
  hgvsp: ENSP00000474625.1:p.Ile338Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*718T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1120T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.200T>C
  hgvsp: ENSP00000358345.2:p.Ile67Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.10T>C
  hgvsp: ENSP00000474856.1:p.Ile4Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*718T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.200T>C
  hgvsp: ENSP00000358344.1:p.Ile67Thr
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile338Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-145301744-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301744
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301742
    reference: chr 1
allele count: 1
allele frequency: 8.46510682964819e-6
allele num: 118132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.13_14delAA
  hgvsp: ENSP00000474856.1:p.Lys5IlefsTer6
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.203_204delAA
  hgvsp: ENSP00000358345.2:p.Lys68IlefsTer6
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*721_*722delAA
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1016_1017delAA
  hgvsp: ENSP00000345684.5:p.Lys339IlefsTer6
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1016_1017delAA
  hgvsp: ENSP00000474625.1:p.Lys339IlefsTer6
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1123_*1124delAA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.203_204delAA
  hgvsp: ENSP00000358344.1:p.Lys68IlefsTer6
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*721_*722delAA
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys339IlefsTer6
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: TAA
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

1-145301748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301748
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301748
    reference: chr 1
allele count: 1
allele frequency: 8.465680132741865e-6
allele num: 118124
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1124A>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*722A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.14A>G
  hgvsp: ENST00000605176.1:c.14A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.204A>G
  hgvsp: ENST00000369338.1:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1017A>G
  hgvsp: ENST00000490598.2:c.1017A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.204A>G
  hgvsp: ENST00000369339.3:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1017A>G
  hgvsp: ENST00000342960.5:c.1017A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*722A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys339Lys
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

1-145301749-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301749
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301749
    reference: chr 1
allele count: 2
allele frequency: 1.693136026548373e-5
allele num: 118124
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1018T>A
  hgvsp: ENSP00000345684.5:p.Phe340Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*723T>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1125T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.15T>A
  hgvsp: ENSP00000474856.1:p.Phe6Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1018T>A
  hgvsp: ENSP00000474625.1:p.Phe340Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.205T>A
  hgvsp: ENSP00000358345.2:p.Phe69Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.205T>A
  hgvsp: ENSP00000358344.1:p.Phe69Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*723T>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe340Ile
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-145301751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301751
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301751
    reference: chr 1
allele count: 1
allele frequency: 8.466396870819716e-6
allele num: 118114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1020T>C
  hgvsp: ENST00000490598.2:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*725T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.207T>C
  hgvsp: ENST00000369338.1:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1127T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.207T>C
  hgvsp: ENST00000369339.3:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.17T>C
  hgvsp: ENST00000605176.1:c.17T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*725T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1020T>C
  hgvsp: ENST00000342960.5:c.1020T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe340Phe
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-145301753-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301753
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301753
    reference: chr 1
allele count: 2
allele frequency: 1.693738249690893e-5
allele num: 118082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.209T>C
  hgvsp: ENSP00000358344.1:p.Met70Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1022T>C
  hgvsp: ENSP00000345684.5:p.Met341Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1129T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1022T>C
  hgvsp: ENSP00000474625.1:p.Met341Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.19T>C
  hgvsp: ENSP00000474856.1:p.Met7Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*727T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.209T>C
  hgvsp: ENSP00000358345.2:p.Met70Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*727T>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met341Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

1-145301754-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301754
    reference: chr 1
allele count: 2
allele frequency: 1.693795626619692e-5
allele num: 118078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.210G>C
  hgvsp: ENSP00000358345.2:p.Met70Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.20G>C
  hgvsp: ENSP00000474856.1:p.Met7Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1023G>C
  hgvsp: ENSP00000474625.1:p.Met341Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1023G>C
  hgvsp: ENSP00000345684.5:p.Met341Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*728G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.210G>C
  hgvsp: ENSP00000358344.1:p.Met70Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1130G>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*728G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55380
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met341Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

1-145301754-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301754
    reference: chr 1
allele count: 1
allele frequency: 8.468978133098461e-6
allele num: 118078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*728G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1023G>T
  hgvsp: ENSP00000474625.1:p.Met341Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.20G>T
  hgvsp: ENSP00000474856.1:p.Met7Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.210G>T
  hgvsp: ENSP00000358345.2:p.Met70Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*728G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.210G>T
  hgvsp: ENSP00000358344.1:p.Met70Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1023G>T
  hgvsp: ENSP00000345684.5:p.Met341Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1130G>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55380
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met341Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

1-145301759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301759
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301759
    reference: chr 1
allele count: 1
allele frequency: 8.473858147614609e-6
allele num: 118010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*733G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1135G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1028G>A
  hgvsp: ENSP00000345684.5:p.Arg343Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1028G>A
  hgvsp: ENSP00000474625.1:p.Arg343Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.215G>A
  hgvsp: ENSP00000358345.2:p.Arg72Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.25G>A
  hgvsp: ENSP00000474856.1:p.Arg9Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*733G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.215G>A
  hgvsp: ENSP00000358344.1:p.Arg72Lys
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg343Lys
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

1-145301761-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301761
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301761
    reference: chr 1
allele count: 1
allele frequency: 8.479175145841813e-6
allele num: 117936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*735A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*735A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1030A>G
  hgvsp: ENSP00000474625.1:p.Asn344Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.217A>G
  hgvsp: ENSP00000358344.1:p.Asn73Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.217A>G
  hgvsp: ENSP00000358345.2:p.Asn73Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1030A>G
  hgvsp: ENSP00000345684.5:p.Asn344Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.27A>G
  hgvsp: ENSP00000474856.1:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1137A>G
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn344Asp
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

1-145301762-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301762
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301762
    reference: chr 1
allele count: 1
allele frequency: 8.478743789320174e-6
allele num: 117942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*736A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.218A>T
  hgvsp: ENSP00000358344.1:p.Asn73Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1031A>T
  hgvsp: ENSP00000474625.1:p.Asn344Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1031A>T
  hgvsp: ENSP00000345684.5:p.Asn344Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.28A>T
  hgvsp: ENSP00000474856.1:p.Asn10Ile
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*736A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1138A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.218A>T
  hgvsp: ENSP00000358345.2:p.Asn73Ile
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn344Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-145301763-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301763
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301763
    reference: chr 1
allele count: 1
allele frequency: 8.483059330516958e-6
allele num: 117882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1032T>C
  hgvsp: ENST00000490598.2:c.1032T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*737T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.219T>C
  hgvsp: ENST00000369338.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1032T>C
  hgvsp: ENST00000342960.5:c.1032T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.219T>C
  hgvsp: ENST00000369339.3:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.29T>C
  hgvsp: ENST00000605176.1:c.29T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*737T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1139T>C
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn344Asn
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-145301767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301767
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301767
    reference: chr 1
allele count: 28
allele frequency: 2.378040494632423e-4
allele num: 117744
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1036C>T
  hgvsp: ENSP00000345684.5:p.Arg346Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.223C>T
  hgvsp: ENSP00000358344.1:p.Arg75Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.223C>T
  hgvsp: ENSP00000358345.2:p.Arg75Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*741C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*741C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1036C>T
  hgvsp: ENSP00000474625.1:p.Arg346Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.33C>T
  hgvsp: ENSP00000474856.1:p.Arg12Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1143C>T
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48273
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg346Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-145301768-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301768
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301768
    reference: chr 1
allele count: 29
allele frequency: 2.463472646958885e-4
allele num: 117720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.224G>A
  hgvsp: ENSP00000358344.1:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*742G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1037G>A
  hgvsp: ENSP00000345684.5:p.Arg346Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.34G>A
  hgvsp: ENSP00000474856.1:p.Arg12Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1144G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1037G>A
  hgvsp: ENSP00000474625.1:p.Arg346Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*742G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.224G>A
  hgvsp: ENSP00000358345.2:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48272
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg346Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-145301771-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301771
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301771
    reference: chr 1
allele count: 2
allele frequency: 1.699004383431309e-5
allele num: 117716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.227A>G
  hgvsp: ENSP00000358344.1:p.Gln76Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1040A>G
  hgvsp: ENSP00000474625.1:p.Gln347Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*745A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1147A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.37A>G
  hgvsp: ENSP00000474856.1:p.Gln13Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1040A>G
  hgvsp: ENSP00000345684.5:p.Gln347Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*745A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.227A>G
  hgvsp: ENSP00000358345.2:p.Gln76Arg
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln347Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

1-145301772-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301772
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301772
    reference: chr 1
allele count: 2
allele frequency: 1.699235344095157e-5
allele num: 117700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.228G>C
  hgvsp: ENSP00000358345.2:p.Gln76His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*746G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1148G>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1041G>C
  hgvsp: ENSP00000345684.5:p.Gln347His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1041G>C
  hgvsp: ENSP00000474625.1:p.Gln347His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.38G>C
  hgvsp: ENSP00000474856.1:p.Gln13His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.228G>C
  hgvsp: ENSP00000358344.1:p.Gln76His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*746G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln347His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

1-145301773-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301773
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301773
    reference: chr 1
allele count: 1
allele frequency: 8.49689863199932e-6
allele num: 117690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.39T>C
  hgvsp: ENSP00000474856.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.229T>C
  hgvsp: ENSP00000358345.2:p.Phe77Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*747T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.229T>C
  hgvsp: ENSP00000358344.1:p.Phe77Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1042T>C
  hgvsp: ENSP00000474625.1:p.Phe348Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1042T>C
  hgvsp: ENSP00000345684.5:p.Phe348Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*747T>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1149T>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe348Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-145301775-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301775
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301775
    reference: chr 1
allele count: 1
allele frequency: 8.497476249553883e-6
allele num: 117682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*749C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.231C>G
  hgvsp: ENSP00000358344.1:p.Phe77Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.231C>G
  hgvsp: ENSP00000358345.2:p.Phe77Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.41C>G
  hgvsp: ENSP00000474856.1:p.Phe14Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1044C>G
  hgvsp: ENSP00000345684.5:p.Phe348Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*749C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1044C>G
  hgvsp: ENSP00000474625.1:p.Phe348Leu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1151C>G
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe348Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/1-145301776-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301776
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301776
    reference: chr 1
allele count: 1
allele frequency: 8.500365515717176e-6
allele num: 117642
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*750A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.42A>C
  hgvsp: ENSP00000474856.1:p.Lys15Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1045A>C
  hgvsp: ENSP00000474625.1:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*750A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.232A>C
  hgvsp: ENSP00000358344.1:p.Lys78Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1045A>C
  hgvsp: ENSP00000345684.5:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.232A>C
  hgvsp: ENSP00000358345.2:p.Lys78Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1152A>C
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys349Gln
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

1-145301776-AAGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301776
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301773
    reference: chr 1
allele count: 1
allele frequency: 8.500365515717176e-6
allele num: 117642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.238_240delGAG
  hgvsp: ENSP00000358345.2:p.Glu80del
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*756_*758delGAG
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1051_1053delGAG
  hgvsp: ENSP00000474625.1:p.Glu351del
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1051_1053delGAG
  hgvsp: ENSP00000345684.5:p.Glu351del
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*756_*758delGAG
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.238_240delGAG
  hgvsp: ENSP00000358344.1:p.Glu80del
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.48_50delGAG
  hgvsp: ENSP00000474856.1:p.Glu17del
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1158_*1160delGAG
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu351del
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: AAGG
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-145301778-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301778
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301778
    reference: chr 1
allele count: 1
allele frequency: 8.500221005746149e-6
allele num: 117644
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1047G>A
  hgvsp: ENST00000342960.5:c.1047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.234G>A
  hgvsp: ENST00000369338.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*752G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.44G>A
  hgvsp: ENST00000605176.1:c.44G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*752G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1047G>A
  hgvsp: ENST00000490598.2:c.1047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.234G>A
  hgvsp: ENST00000369339.3:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1154G>A
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys349Lys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-145301778-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301778
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301778
    reference: chr 1
allele count: 2
allele frequency: 1.70004420114923e-5
allele num: 117644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1047G>C
  hgvsp: ENSP00000474625.1:p.Lys349Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.234G>C
  hgvsp: ENSP00000358344.1:p.Lys78Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1154G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.44G>C
  hgvsp: ENSP00000474856.1:p.Lys15Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*752G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*752G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.234G>C
  hgvsp: ENSP00000358345.2:p.Lys78Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1047G>C
  hgvsp: ENSP00000345684.5:p.Lys349Asn
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys349Asn
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-145301779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301779
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301779
    reference: chr 1
allele count: 15
allele frequency: 1.275141540711019e-4
allele num: 117634
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1155G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.45G>A
  hgvsp: ENSP00000474856.1:p.Glu16Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.235G>A
  hgvsp: ENSP00000358344.1:p.Glu79Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.235G>A
  hgvsp: ENSP00000358345.2:p.Glu79Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1048G>A
  hgvsp: ENSP00000345684.5:p.Glu350Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1048G>A
  hgvsp: ENSP00000474625.1:p.Glu350Lys
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*753G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*753G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48270
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu350Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-145301780-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301780
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301780
    reference: chr 1
allele count: 2
allele frequency: 1.700217627856366e-5
allele num: 117632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.236A>T
  hgvsp: ENSP00000358345.2:p.Glu79Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*754A>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.46A>T
  hgvsp: ENSP00000474856.1:p.Glu16Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1049A>T
  hgvsp: ENSP00000345684.5:p.Glu350Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1049A>T
  hgvsp: ENSP00000474625.1:p.Glu350Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1156A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.236A>T
  hgvsp: ENSP00000358344.1:p.Glu79Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*754A>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48270
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu350Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

1-145301782-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301782
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301782
    reference: chr 1
allele count: 1
allele frequency: 8.505281779985371e-6
allele num: 117574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.238G>C
  hgvsp: ENSP00000358345.2:p.Glu80Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.48G>C
  hgvsp: ENSP00000474856.1:p.Glu17Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1051G>C
  hgvsp: ENSP00000474625.1:p.Glu351Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1158G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.238G>C
  hgvsp: ENSP00000358344.1:p.Glu80Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*756G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*756G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1051G>C
  hgvsp: ENSP00000345684.5:p.Glu351Gln
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48270
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55381
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu351Gln
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-145301784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301784
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301784
    reference: chr 1
allele count: 1
allele frequency: 8.509189925119129e-6
allele num: 117520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1053G>A
  hgvsp: ENST00000490598.2:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*758G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.240G>A
  hgvsp: ENST00000369339.3:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.50G>A
  hgvsp: ENST00000605176.1:c.50G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1160G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1053G>A
  hgvsp: ENST00000342960.5:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.240G>A
  hgvsp: ENST00000369338.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*758G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48270
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu351Glu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-145301787-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301787
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301787
    reference: chr 1
allele count: 3
allele frequency: 2.553843534519452e-5
allele num: 117470
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1056G>T
  hgvsp: ENSP00000345684.5:p.Lys352Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.243G>T
  hgvsp: ENSP00000358345.2:p.Lys81Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.243G>T
  hgvsp: ENSP00000358344.1:p.Lys81Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*761G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1163G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.53G>T
  hgvsp: ENSP00000474856.1:p.Lys18Asn
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*761G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1056G>T
  hgvsp: ENSP00000474625.1:p.Lys352Asn
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48270
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys352Asn
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

1-145301791-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301791
    reference: chr 1
allele count: 1
allele frequency: 8.518903446748335e-6
allele num: 117386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*765G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1060G>T
  hgvsp: ENSP00000474625.1:p.Ala354Ser
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1167G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.247G>T
  hgvsp: ENSP00000358345.2:p.Ala83Ser
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.247G>T
  hgvsp: ENSP00000358344.1:p.Ala83Ser
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.57G>T
  hgvsp: ENSP00000474856.1:p.Ala20Ser
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1060G>T
  hgvsp: ENSP00000345684.5:p.Ala354Ser
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*765G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48270
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala354Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-145301792-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301792
    reference: chr 1
allele count: 1
allele frequency: 8.521952549768203e-6
allele num: 117344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.58C>A
  hgvsp: ENSP00000474856.1:p.Ala20Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1061C>A
  hgvsp: ENSP00000474625.1:p.Ala354Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*766C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1061C>A
  hgvsp: ENSP00000345684.5:p.Ala354Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*766C>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.248C>A
  hgvsp: ENSP00000358345.2:p.Ala83Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1168C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.248C>A
  hgvsp: ENSP00000358344.1:p.Ala83Glu
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55380
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala354Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

1-145301792-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301792
    reference: chr 1
allele count: 1
allele frequency: 8.521952549768203e-6
allele num: 117344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*766C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1168C>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*766C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.248C>G
  hgvsp: ENSP00000358344.1:p.Ala83Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1061C>G
  hgvsp: ENSP00000345684.5:p.Ala354Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.248C>G
  hgvsp: ENSP00000358345.2:p.Ala83Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.58C>G
  hgvsp: ENSP00000474856.1:p.Ala20Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1061C>G
  hgvsp: ENSP00000474625.1:p.Ala354Gly
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55380
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala354Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

1-145301792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301792
    reference: chr 1
allele count: 6
allele frequency: 5.113171529860922e-5
allele num: 117344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*766C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.248C>T
  hgvsp: ENSP00000358345.2:p.Ala83Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1061C>T
  hgvsp: ENSP00000474625.1:p.Ala354Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1061C>T
  hgvsp: ENSP00000345684.5:p.Ala354Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.58C>T
  hgvsp: ENSP00000474856.1:p.Ala20Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1168C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.248C>T
  hgvsp: ENSP00000358344.1:p.Ala83Val
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*766C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48269
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala354Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-145301793-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301793
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301793
    reference: chr 1
allele count: 56720
allele frequency: 4.854834291974802e-1
allele num: 116832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*767A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.249A>G
  hgvsp: ENST00000369339.3:c.249A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.249A>G
  hgvsp: ENST00000369338.1:c.249A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1062A>G
  hgvsp: ENST00000342960.5:c.1062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1062A>G
  hgvsp: ENST00000490598.2:c.1062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*767A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1169A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.59A>G
  hgvsp: ENST00000605176.1:c.59A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 8.75e1
  variant carriers: 918
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 723
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 785
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 48829
  bin: 9.75e1
  variant carriers: 48519
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.25e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.25e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 613
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 869
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.25e1
  variant carriers: 817
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 576
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 9.25e1
  variant carriers: 919
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 18
hgvs: p.Ala354Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

1-145301794-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301794
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301794
    reference: chr 1
allele count: 3
allele frequency: 2.559989077379936e-5
allele num: 117188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.250G>T
  hgvsp: ENSP00000358344.1:p.Glu84Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1063G>T
  hgvsp: ENSP00000474625.1:p.Glu355Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.250G>T
  hgvsp: ENSP00000358345.2:p.Glu84Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.60G>T
  hgvsp: ENSP00000474856.1:p.Glu21Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1063G>T
  hgvsp: ENSP00000345684.5:p.Glu355Ter
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*768G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*768G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1170G>T
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45829
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu355Ter
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-145301794-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301794
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301794
    reference: chr 1
allele count: 1
allele frequency: 8.533296924599789e-6
allele num: 117188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1063G>C
  hgvsp: ENSP00000474625.1:p.Glu355Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.60G>C
  hgvsp: ENSP00000474856.1:p.Glu21Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*768G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1170G>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1063G>C
  hgvsp: ENSP00000345684.5:p.Glu355Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.250G>C
  hgvsp: ENSP00000358344.1:p.Glu84Gln
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*768G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.250G>C
  hgvsp: ENSP00000358345.2:p.Glu84Gln
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55884
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu355Gln
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/1-145301795-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301795
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301795
    reference: chr 1
allele count: 1
allele frequency: 8.535919147773831e-6
allele num: 117152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.251A>C
  hgvsp: ENSP00000358345.2:p.Glu84Ala
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1064A>C
  hgvsp: ENSP00000345684.5:p.Glu355Ala
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*769A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.61A>C
  hgvsp: ENSP00000474856.1:p.Glu21Ala
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1171A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1064A>C
  hgvsp: ENSP00000474625.1:p.Glu355Ala
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*769A>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.251A>C
  hgvsp: ENSP00000358344.1:p.Glu84Ala
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45837
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu355Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

1-145301797-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301797
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301797
    reference: chr 1
allele count: 2
allele frequency: 1.707591953826714e-5
allele num: 117124
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1066C>G
  hgvsp: ENSP00000345684.5:p.Gln356Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.253C>G
  hgvsp: ENSP00000358344.1:p.Gln85Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.63C>G
  hgvsp: ENSP00000474856.1:p.Gln22Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.253C>G
  hgvsp: ENSP00000358345.2:p.Gln85Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1173C>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*771C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1066C>G
  hgvsp: ENSP00000474625.1:p.Gln356Glu
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*771C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45829
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln356Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

1-145301799-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301799
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301799
    reference: chr 1
allele count: 1
allele frequency: 8.540584859251161e-6
allele num: 117088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.255G>C
  hgvsp: ENSP00000358344.1:p.Gln85His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.255G>C
  hgvsp: ENSP00000358345.2:p.Gln85His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1068G>C
  hgvsp: ENSP00000345684.5:p.Gln356His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*773G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.65G>C
  hgvsp: ENSP00000474856.1:p.Gln22His
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1175G>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*773G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1068G>C
  hgvsp: ENSP00000474625.1:p.Gln356His
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln356His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

1-145301802-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301802
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301802
    reference: chr 1
allele count: 58252
allele frequency: 4.98963561920751e-1
allele num: 116746
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1071C>G
  hgvsp: ENST00000342960.5:c.1071C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1178C>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.258C>G
  hgvsp: ENST00000369338.1:c.258C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*776C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1071C>G
  hgvsp: ENST00000490598.2:c.1071C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*776C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.68C>G
  hgvsp: ENST00000605176.1:c.68C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.258C>G
  hgvsp: ENST00000369339.3:c.258C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: synonymous
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 560
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 8.25e1
  variant carriers: 1156
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 898
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 9.25e1
  variant carriers: 1566
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.25e1
  variant carriers: 725
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 973
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 826
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.25e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.75e1
  variant carriers: 1145
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.25e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 8.75e1
  variant carriers: 1355
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 7.25e1
  variant carriers: 1057
genotype depth: GenotypeDepth
  all individuals: 45824
  bin: 9.75e1
  variant carriers: 45768
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 2.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 19
hgvs: p.Leu357Leu
num of homozygotes: 595
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

1-145301804-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301804
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301804
    reference: chr 1
allele count: 4
allele frequency: 3.431708991077557e-5
allele num: 116560
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1073A>G
  hgvsp: ENSP00000345684.5:p.Lys358Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.70A>G
  hgvsp: ENSP00000474856.1:p.Lys24Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1180A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1073A>G
  hgvsp: ENSP00000474625.1:p.Lys358Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*778A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.260A>G
  hgvsp: ENSP00000358344.1:p.Lys87Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.260A>G
  hgvsp: ENSP00000358345.2:p.Lys87Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*778A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27694
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Lys358Arg
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-145301807-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301807
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301807
    reference: chr 1
allele count: 1
allele frequency: 8.581628449814637e-6
allele num: 116528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.263A>G
  hgvsp: ENSP00000358345.2:p.Gln88Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.263A>G
  hgvsp: ENSP00000358344.1:p.Gln88Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.73A>G
  hgvsp: ENSP00000474856.1:p.Gln25Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*781A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1183A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1076A>G
  hgvsp: ENSP00000345684.5:p.Gln359Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1076A>G
  hgvsp: ENSP00000474625.1:p.Gln359Arg
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*781A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln359Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-145301809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301809
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301809
    reference: chr 1
allele count: 2
allele frequency: 1.716885569576788e-5
allele num: 116490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*783G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.75G>A
  hgvsp: ENSP00000474856.1:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.265G>A
  hgvsp: ENSP00000358345.2:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1078G>A
  hgvsp: ENSP00000345684.5:p.Ala360Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.265G>A
  hgvsp: ENSP00000358344.1:p.Ala89Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1078G>A
  hgvsp: ENSP00000474625.1:p.Ala360Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1185G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*783G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27694
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala360Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

1-145301809-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301809
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301809
    reference: chr 1
allele count: 2
allele frequency: 1.716885569576788e-5
allele num: 116490
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*783G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1078G>C
  hgvsp: ENSP00000345684.5:p.Ala360Pro
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*783G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.265G>C
  hgvsp: ENSP00000358344.1:p.Ala89Pro
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.265G>C
  hgvsp: ENSP00000358345.2:p.Ala89Pro
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.75G>C
  hgvsp: ENSP00000474856.1:p.Ala26Pro
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1185G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1078G>C
  hgvsp: ENSP00000474625.1:p.Ala360Pro
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27694
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50498
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala360Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-145301810-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301810
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301810
    reference: chr 1
allele count: 1
allele frequency: 8.586344278060173e-6
allele num: 116464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.266C>G
  hgvsp: ENSP00000358344.1:p.Ala89Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1079C>G
  hgvsp: ENSP00000474625.1:p.Ala360Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.266C>G
  hgvsp: ENSP00000358345.2:p.Ala89Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*784C>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1079C>G
  hgvsp: ENSP00000345684.5:p.Ala360Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1186C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.76C>G
  hgvsp: ENSP00000474856.1:p.Ala26Gly
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*784C>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27692
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala360Gly
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

1-145301820-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301820
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301820
    reference: chr 1
allele count: 21
allele frequency: 1.805116215101087e-4
allele num: 116336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.86C>T
  hgvsp: ENST00000605176.1:c.86C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1089C>T
  hgvsp: ENST00000490598.2:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1089C>T
  hgvsp: ENST00000342960.5:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*794C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.276C>T
  hgvsp: ENST00000369339.3:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*794C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.276C>T
  hgvsp: ENST00000369338.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1196C>T
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27692
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 9.25e1
  variant carriers: 0
hgvs: c.*1196C>T
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-145301822-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301822
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301822
    reference: chr 1
allele count: 1
allele frequency: 8.597565169543985e-6
allele num: 116312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278G>C
  hgvsp: ENSP00000358344.1:p.Arg93Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278G>C
  hgvsp: ENSP00000358345.2:p.Arg93Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091G>C
  hgvsp: ENSP00000345684.5:p.Arg364Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091G>C
  hgvsp: ENSP00000474625.1:p.Arg364Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88G>C
  hgvsp: ENSP00000474856.1:p.Arg30Thr
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198G>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg364Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-145301823-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301823
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301823
    reference: chr 1
allele count: 1
allele frequency: 8.598304414369486e-6
allele num: 116302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+1G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+1G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+1G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+1G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+1G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+1G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+1G>T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+1G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
hgvs: c.*1198+1G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-145301825-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301825
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301825
    reference: chr 1
allele count: 1
allele frequency: 8.601558602418759e-6
allele num: 116258
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+3G>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+3G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+3G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+3G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+3G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+3G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+3G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+3G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50494
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
hgvs: c.*1198+3G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-145301826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301826
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301826
    reference: chr 1
allele count: 12
allele frequency: 1.032311345101683e-4
allele num: 116244
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+4A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+4A>G
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27688
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.25e1
  variant carriers: 0
hgvs: c.*1198+4A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-145301827-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301827
    reference: chr 1
allele count: 3
allele frequency: 2.580778362754207e-5
allele num: 116244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+5G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+5G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+5G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+5G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+5G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+5G>C
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+5G>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+5G>C
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27685
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50494
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.5e0
  variant carriers: 0
hgvs: c.*1198+5G>C
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

1-145301830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301830
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301830
    reference: chr 1
allele count: 5
allele frequency: 4.303148183210837e-5
allele num: 116194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+8G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+8G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+8G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+8G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+8G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+8G>A
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+8G>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+8G>A
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27685
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 9.25e1
  variant carriers: 0
hgvs: c.*1198+8G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

1-145301830-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301830
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301830
    reference: chr 1
allele count: 1
allele frequency: 8.606296366421674e-6
allele num: 116194
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+8G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+8G>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+8G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+8G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+8G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+8G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+8G>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+8G>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27685
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50492
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
hgvs: c.*1198+8G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-145301831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301831
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301831
    reference: chr 1
allele count: 40023
allele frequency: 3.483896239554318e-1
allele num: 114880
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+9A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+9A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+9A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+9A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+9A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+9A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+9A>G
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+9A>G
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 9.25e1
  variant carriers: 2281
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 4.75e1
  variant carriers: 754
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 7.25e1
  variant carriers: 1291
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 6.75e1
  variant carriers: 1131
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.25e1
  variant carriers: 327
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 2.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 4.25e1
  variant carriers: 633
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 8.75e1
  variant carriers: 2028
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.75e1
  variant carriers: 471
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 6.25e1
  variant carriers: 997
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 5.25e1
  variant carriers: 900
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.75e1
  variant carriers: 1451
genotype depth: GenotypeDepth
  all individuals: 27313
  bin: 9.75e1
  variant carriers: 24824
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 5.75e1
  variant carriers: 947
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 8.25e1
  variant carriers: 1782
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 91
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.5e0
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.25e1
  variant carriers: 90
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-145301832-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145301832
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 145301832
    reference: chr 1
allele count: 58
allele frequency: 4.993886793752475e-4
allele num: 116142
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000255168
  ensembl protein: ENSP00000457682
  ensembl transcript: ENST00000468030
  gene symbol: RP11-458D21.5
  hgvsc: ENST00000468030.1:c.*1198+10C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000414194
  ensembl transcript: ENST00000448873
  gene symbol: NBPF10
  hgvsc: ENST00000448873.2:c.*796+10C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474625
  ensembl transcript: ENST00000490598
  gene symbol: NBPF10
  hgvsc: ENST00000490598.2:c.1091+10C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358345
  ensembl transcript: ENST00000369339
  gene symbol: NBPF10
  hgvsc: ENST00000369339.3:c.278+10C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000358344
  ensembl transcript: ENST00000369338
  gene symbol: NBPF10
  hgvsc: ENST00000369338.1:c.278+10C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000345684
  ensembl transcript: ENST00000342960
  gene symbol: NBPF10
  hgvsc: ENST00000342960.5:c.1091+10C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000473920
  ensembl transcript: ENST00000464433
  gene symbol: NBPF10
  hgvsc: ENST00000464433.2:c.*796+10C>T
  variant of: http://identifiers.org/hgnc/31992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163386
  ensembl protein: ENSP00000474856
  ensembl transcript: ENST00000605176
  gene symbol: NBPF10
  hgvsc: ENST00000605176.1:c.88+10C>T
  variant of: http://identifiers.org/hgnc/31992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24535
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55305
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1649
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.076544425301501e-5
allele num: 65008
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.960424e6

FS
type: SiteQuality
SIO_000300: 1.017e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e0

MQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-2

QD
type: SiteQuality
SIO_000300: 3.55e0

MQ
type: SiteQuality
SIO_000300: 4.149e1

VQSLOD
type: SiteQuality
SIO_000300: -2.531e0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538272212650751e-5
allele num: 65008
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.955e0

QD
type: SiteQuality
SIO_000300: 7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.043e0

DP
type: SiteQuality
SIO_000300: 8.960565e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.908e0

FS
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 4.005e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
all individuals: 1654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55306
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.152899553914782e-5
allele num: 65010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.277e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.960576e6

VQSLOD
type: SiteQuality
SIO_000300: -2.819e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e0

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

MQ
type: SiteQuality
SIO_000300: 3.963e1

QD
type: SiteQuality
SIO_000300: 2.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
all individuals: 1660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55306
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.114578689255461e-4
allele num: 8972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.622e0

QD
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -2.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

MQ
type: SiteQuality
SIO_000300: 4.05e1

DP
type: SiteQuality
SIO_000300: 8.960237e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.141e0

GenotypeQuality
all individuals: 390
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 55385
bin: 9.75e1
variant carriers: 463

GenotypeQuality
all individuals: 640
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 1

South Asian
type: Population
allele count: 17
allele frequency: 1.029678982434888e-3
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.592841163310962e-3
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 212
allele frequency: 2.365015618027666e-2
allele num: 8964
num of homozygotes: 0

Latino
type: Population
allele count: 53
allele frequency: 4.582396679923915e-3
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 188
allele frequency: 2.892040734701412e-3
allele num: 65006
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.796e0

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

DP
type: SiteQuality
SIO_000300: 9.010133e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQ
type: SiteQuality
SIO_000300: 4.028e1

FS
type: SiteQuality
SIO_000300: 8.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.667e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.467e0

QD
type: SiteQuality
SIO_000300: 2.85e0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55386
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1626
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538224888478696e-5
allele num: 65010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 8.957964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

QD
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.351e0

MQ
type: SiteQuality
SIO_000300: 3.993e1

VQSLOD
type: SiteQuality
SIO_000300: -4.199e0

GenotypeQuality
all individuals: 55385
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.076639079469588e-5
allele num: 65006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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African
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European (Finnish)
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allele frequency: 0.0e0
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DP
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BaseQRankSum
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QD
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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East Asian
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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BaseQRankSum
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MQ
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FS
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ReadPosRankSum
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VQSLOD
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DP
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QD
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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Other
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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South Asian
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East Asian
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Other
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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QD
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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Latino
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European (Finnish)
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Other
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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QD
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MQ
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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DP
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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DP
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African
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ReadPosRankSum
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SIO_000300: 3.49e-1

FS
type: SiteQuality
SIO_000300: 3.806e0

MQRankSum
type: SiteQuality
SIO_000300: 8.82e-1

MQ
type: SiteQuality
SIO_000300: 4.012e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

DP
type: SiteQuality
SIO_000300: 8.957315e6

QD
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.016e0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1648
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538130248869474e-5
allele num: 65014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.962e0

FS
type: SiteQuality
SIO_000300: 4.351e0

QD
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.829e0

VQSLOD
type: SiteQuality
SIO_000300: -4.938e0

DP
type: SiteQuality
SIO_000300: 8.956717e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

GenotypeQuality
all individuals: 723
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538082933431771e-5
allele num: 65016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.042e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -3.002e0

FS
type: SiteQuality
SIO_000300: 3.514e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 8.956523e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

QD
type: SiteQuality
SIO_000300: 3.12e0

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.53e0

FS
type: SiteQuality
SIO_000300: 1.502e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.119e-1

DP
type: SiteQuality
SIO_000300: 8.955207e6

MQRankSum
type: SiteQuality
SIO_000300: -4.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.649e0

MQ
type: SiteQuality
SIO_000300: 3.944e1

GenotypeQuality
all individuals: 643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538935056940597e-5
allele num: 64980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.502e0

DP
type: SiteQuality
SIO_000300: 8.955207e6

QD
type: SiteQuality
SIO_000300: 3.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.649e0

MQ
type: SiteQuality
SIO_000300: 3.944e1

VQSLOD
type: SiteQuality
SIO_000300: -8.119e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e0

GenotypeQuality
all individuals: 380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.11632060727841e-4
allele num: 8958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e0

MQ
type: SiteQuality
SIO_000300: 3.973e1

QD
type: SiteQuality
SIO_000300: 3.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.62e-1

FS
type: SiteQuality
SIO_000300: 1.486e0

DP
type: SiteQuality
SIO_000300: 8.95451e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.766e0

VQSLOD
type: SiteQuality
SIO_000300: -2.574e0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.232641214556821e-4
allele num: 8958
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.64e0

MQ
type: SiteQuality
SIO_000300: 3.962e1

FS
type: SiteQuality
SIO_000300: 1.3853e1

VQSLOD
type: SiteQuality
SIO_000300: -4.746e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.125e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

DP
type: SiteQuality
SIO_000300: 8.954559e6

GenotypeQuality
all individuals: 1591
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539266693347289e-5
allele num: 64966
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 4.004e1

MQRankSum
type: SiteQuality
SIO_000300: 2.58e0

VQSLOD
type: SiteQuality
SIO_000300: -3.405e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 6.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.111e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 8.954297e6

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
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GenotypeQuality
all individuals: 495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.079576250307958e-5
allele num: 64944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

DP
type: SiteQuality
SIO_000300: 8.953854e6

VQSLOD
type: SiteQuality
SIO_000300: -3.108e0

MQ
type: SiteQuality
SIO_000300: 3.843e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 1.719e0

QD
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
all individuals: 497
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64942
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.235136343316942e-4
allele num: 8948
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

DP
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InbreedingCoeff
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SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 1.1838e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

MQ
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SIO_000300: 3.923e1

QD
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SIO_000300: 2.23e0

VQSLOD
type: SiteQuality
SIO_000300: -3.612e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8948
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64942
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

FS
type: SiteQuality
SIO_000300: 1.1838e1

QD
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
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SIO_000300: 3.923e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64896
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.157e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
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MQ
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SIO_000300: 3.815e1

DP
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SIO_000300: 8.952261e6

QD
type: SiteQuality
SIO_000300: 7.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64846
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.122334455667789e-4
allele num: 8910
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 3.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.082e0

FS
type: SiteQuality
SIO_000300: 1.024e0

DP
type: SiteQuality
SIO_000300: 8.95042e6

MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

MQ
type: SiteQuality
SIO_000300: 3.822e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.581e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542020046260601e-5
allele num: 64850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.647e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

QD
type: SiteQuality
SIO_000300: 1.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.53e-1

FS
type: SiteQuality
SIO_000300: 9.411e0

MQ
type: SiteQuality
SIO_000300: 3.907e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.950276e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64810
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
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MQ
type: SiteQuality
SIO_000300: 3.694e1

FS
type: SiteQuality
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ClippingRankSum
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VQSLOD
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 23
allele frequency: 3.554538991747287e-4
allele num: 64706
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South Asian
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allele num: 16508
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African
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allele frequency: 2.255299954894001e-4
allele num: 8868
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Other
type: Population
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allele num: 890
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VQSLOD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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MQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 3.797e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Latino
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allele frequency: 3.460806367883717e-4
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele num: 6614
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South Asian
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allele num: 16508
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Other
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European (Non-Finnish)
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allele frequency: 6.182380216383307e-5
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African
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allele frequency: 1.694915254237288e-3
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QD
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.545833977430824e-5
allele num: 64690
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African
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Other
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allele num: 892
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East Asian
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Latino
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South Asian
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QD
type: SiteQuality
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VQSLOD
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FS
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546072974644403e-5
allele num: 64680
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

FS
type: SiteQuality
SIO_000300: 7.32e-1

DP
type: SiteQuality
SIO_000300: 8.941862e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

QD
type: SiteQuality
SIO_000300: 2.17e0

VQSLOD
type: SiteQuality
SIO_000300: -2.751e0

MQ
type: SiteQuality
SIO_000300: 4.036e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.130198915009042e-4
allele num: 8848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64672
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.941688e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

QD
type: SiteQuality
SIO_000300: 4.52e0

ReadPosRankSum
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SIO_000300: -1.171e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 3.643e1

VQSLOD
type: SiteQuality
SIO_000300: -4.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.1e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546359868868683e-5
allele num: 64668
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 2.58e0

VQSLOD
type: SiteQuality
SIO_000300: -4.243e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.061e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.1e-1

FS
type: SiteQuality
SIO_000300: 7.128e0

MQ
type: SiteQuality
SIO_000300: 3.755e1

DP
type: SiteQuality
SIO_000300: 8.940863e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547029702970297e-5
allele num: 64640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

MQ
type: SiteQuality
SIO_000300: 3.6e1

VQSLOD
type: SiteQuality
SIO_000300: -2.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

FS
type: SiteQuality
SIO_000300: 1.3541e1

QD
type: SiteQuality
SIO_000300: 2.43e0

DP
type: SiteQuality
SIO_000300: 8.939735e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547029702970297e-5
allele num: 64640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

FS
type: SiteQuality
SIO_000300: 1.3541e1

MQ
type: SiteQuality
SIO_000300: 3.6e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-2

DP
type: SiteQuality
SIO_000300: 8.939735e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 2.43e0

VQSLOD
type: SiteQuality
SIO_000300: -2.569e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64642
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -1.261e0

VQSLOD
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MQRankSum
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BaseQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.3493e1

MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.093963676866434e-5
allele num: 64642
num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 3.3493e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.939593e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.325259515570934e-4
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.547125440930751e-4
allele num: 64636
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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MQ
type: SiteQuality
SIO_000300: 3.582e1

VQSLOD
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QD
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DP
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.131733816206428e-4
allele num: 8836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547029702970297e-5
allele num: 64640
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

FS
type: SiteQuality
SIO_000300: 7.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 4.23e0

VQSLOD
type: SiteQuality
SIO_000300: -2.931e0

DP
type: SiteQuality
SIO_000300: 8.938568e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 3.772e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.132246376811594e-4
allele num: 8832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.3e0

MQ
type: SiteQuality
SIO_000300: 3.681e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

QD
type: SiteQuality
SIO_000300: 1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 4.372e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.561e0

DP
type: SiteQuality
SIO_000300: 8.937206e6

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
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variant carriers: 0

GenotypeQuality
all individuals: 55381
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5485149741398e-5
allele num: 64578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.175e0

FS
type: SiteQuality
SIO_000300: 1.7651e1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e0

QD
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.641e0

DP
type: SiteQuality
SIO_000300: 8.93606e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

MQ
type: SiteQuality
SIO_000300: 3.497e1

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.648136097424932e-5
allele num: 64542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.9356e6

FS
type: SiteQuality
SIO_000300: 3.75e0

MQ
type: SiteQuality
SIO_000300: 3.534e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 5.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.171e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.326e0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 463
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GenotypeQuality
all individuals: 55380
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 228
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GenotypeQuality
all individuals: 240
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GenotypeQuality
all individuals: 69
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GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 100
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GenotypeQuality
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GenotypeQuality
all individuals: 345
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GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

FS
type: SiteQuality
SIO_000300: 9.97e-1

QD
type: SiteQuality
SIO_000300: 3.05e0

MQ
type: SiteQuality
SIO_000300: 3.529e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.049e0

VQSLOD
type: SiteQuality
SIO_000300: -3.212e0

DP
type: SiteQuality
SIO_000300: 8.93485e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
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GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 65
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8768
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64472
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

QD
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

MQ
type: SiteQuality
SIO_000300: 3.351e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

DP
type: SiteQuality
SIO_000300: 8.934739e6

VQSLOD
type: SiteQuality
SIO_000300: -3.544e0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
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GenotypeQuality
all individuals: 131
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GenotypeQuality
all individuals: 65
bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 130
bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 346
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 241
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variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551060925673161e-5
allele num: 64472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

DP
type: SiteQuality
SIO_000300: 8.934739e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

MQ
type: SiteQuality
SIO_000300: 3.351e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

QD
type: SiteQuality
SIO_000300: 2.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.544e0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55380
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 461
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GenotypeQuality
all individuals: 90
bin: 4.75e1
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GenotypeQuality
all individuals: 241
bin: 9.25e1
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GenotypeQuality
all individuals: 241
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.140510948905109e-4
allele num: 8768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818843215714805e-4
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551060925673161e-5
allele num: 64472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

QD
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 3.351e1

DP
type: SiteQuality
SIO_000300: 8.934739e6

VQSLOD
type: SiteQuality
SIO_000300: -3.544e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 12

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 26

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 30

GenotypeQuality
all individuals: 116
bin: 9.25e1
variant carriers: 46

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 30

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 22

GenotypeQuality
all individuals: 477
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variant carriers: 12

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 30

GenotypeQuality
all individuals: 123
bin: 8.25e1
variant carriers: 45

GenotypeQuality
all individuals: 270
bin: 6.75e1
variant carriers: 43

GenotypeQuality
all individuals: 153
bin: 7.25e1
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GenotypeQuality
all individuals: 468
bin: 6.25e1
variant carriers: 32

GenotypeQuality
all individuals: 56860
bin: 9.75e1
variant carriers: 56371

GenotypeQuality
all individuals: 221
bin: 7.5e0
variant carriers: 21

Latino
type: Population
allele count: 5711
allele frequency: 4.958326098280951e-1
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 7885
allele frequency: 4.804996953077392e-1
allele num: 16410
num of homozygotes: 0

Other
type: Population
allele count: 433
allele frequency: 4.887133182844244e-1
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 3784
allele frequency: 4.355432780847145e-1
allele num: 8688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3248
allele frequency: 4.915254237288136e-1
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31404
allele frequency: 4.891131669937389e-1
allele num: 64206
num of homozygotes: 0

East Asian
type: Population
allele count: 4255
allele frequency: 4.996477219351808e-1
allele num: 8516
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.6242e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.196e-1

FS
type: SiteQuality
SIO_000300: 7.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 8.892611e6

MQRankSum
type: SiteQuality
SIO_000300: -1.281e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

MQ
type: SiteQuality
SIO_000300: 3.326e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.034e1

GenotypeQuality
all individuals: 284
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 55884
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 53
bin: 4.25e1
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GenotypeQuality
all individuals: 169
bin: 7.25e1
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GenotypeQuality
all individuals: 471
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 594
bin: 6.25e1
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GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819725827975252e-4
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQ
type: SiteQuality
SIO_000300: 3.252e1

FS
type: SiteQuality
SIO_000300: 6.173e0

VQSLOD
type: SiteQuality
SIO_000300: -4.028e0

DP
type: SiteQuality
SIO_000300: 7.834015e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 169
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 8
bin: 5.75e1
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GenotypeQuality
all individuals: 173
bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552891483943102e-5
allele num: 64396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e0

VQSLOD
type: SiteQuality
SIO_000300: -4.028e0

FS
type: SiteQuality
SIO_000300: 6.173e0

DP
type: SiteQuality
SIO_000300: 7.834015e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQ
type: SiteQuality
SIO_000300: 3.252e1

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 135
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553615262716341e-5
allele num: 64366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.245e0

DP
type: SiteQuality
SIO_000300: 7.837077e6

VQSLOD
type: SiteQuality
SIO_000300: -4.018e0

MQ
type: SiteQuality
SIO_000300: 3.28e1

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

FS
type: SiteQuality
SIO_000300: 7.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

QD
type: SiteQuality
SIO_000300: 3.54e0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 55886
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
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variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.107809926344905e-5
allele num: 64354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.298e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.922e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.993e0

DP
type: SiteQuality
SIO_000300: 7.833376e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 3.359e0

QD
type: SiteQuality
SIO_000300: 2.07e0

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 202
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GenotypeQuality
all individuals: 528
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GenotypeQuality
all individuals: 267
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GenotypeQuality
all individuals: 175
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GenotypeQuality
all individuals: 134
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GenotypeQuality
all individuals: 255
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GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 326
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variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55886
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55458135124211e-5
allele num: 64326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.452e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.42e-1

FS
type: SiteQuality
SIO_000300: 9.57e-1

MQ
type: SiteQuality
SIO_000300: 3.191e1

DP
type: SiteQuality
SIO_000300: 7.833073e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.866e0

QD
type: SiteQuality
SIO_000300: 4.82e0

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 16

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 17

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 12

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 78
bin: 7.25e1
variant carriers: 21

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 16

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 38

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 127
bin: 6.75e1
variant carriers: 20

GenotypeQuality
all individuals: 70
bin: 8.25e1
variant carriers: 33

GenotypeQuality
all individuals: 49
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variant carriers: 26

GenotypeQuality
all individuals: 99
bin: 7.75e1
variant carriers: 31

GenotypeQuality
all individuals: 57683
bin: 9.75e1
variant carriers: 57540

GenotypeQuality
all individuals: 233
bin: 6.25e1
variant carriers: 27

Other
type: Population
allele count: 436
allele frequency: 4.932126696832579e-1
allele num: 884
num of homozygotes: 1

South Asian
type: Population
allele count: 8182
allele frequency: 4.971442459594118e-1
allele num: 16458
num of homozygotes: 45

European (Finnish)
type: Population
allele count: 3275
allele frequency: 4.959115687462144e-1
allele num: 6604
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 31521
allele frequency: 4.915478900913826e-1
allele num: 64126
num of homozygotes: 13

East Asian
type: Population
allele count: 4259
allele frequency: 5.0212214100448e-1
allele num: 8482
num of homozygotes: 19

African
type: Population
allele count: 4794
allele frequency: 5.524314358147039e-1
allele num: 8678
num of homozygotes: 459

Latino
type: Population
allele count: 5785
allele frequency: 5.024318221295814e-1
allele num: 11514
num of homozygotes: 56

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.342e-1

DP
type: SiteQuality
SIO_000300: 7.78096e6

MQ
type: SiteQuality
SIO_000300: 3.113e1

MQRankSum
type: SiteQuality
SIO_000300: -1.751e0

VQSLOD
type: SiteQuality
SIO_000300: 2.6955e2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.383e0

FS
type: SiteQuality
SIO_000300: 7.73e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

GenotypeQuality
all individuals: 50498
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 930
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 565
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GenotypeQuality
all individuals: 1098
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GenotypeQuality
all individuals: 2048
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GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 515
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variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.18427285646613e-4
allele num: 8444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.68559647643145e-5
allele num: 64026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.430437e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

MQ
type: SiteQuality
SIO_000300: 3.015e1

QD
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 5.864e0

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.432e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

GenotypeQuality
all individuals: 50498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 682
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 929
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GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 564
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 38
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GenotypeQuality
all individuals: 1098
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GenotypeQuality
all individuals: 1163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.14e-1

QD
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.25e-1

DP
type: SiteQuality
SIO_000300: 5.429817e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

FS
type: SiteQuality
SIO_000300: 4.049e0

MQ
type: SiteQuality
SIO_000300: 3.03e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -4.502e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

GenotypeQuality
all individuals: 656
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 1097
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variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 577
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 1160
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GenotypeQuality
all individuals: 50498
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2006
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 953
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740341106856944e-4
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.596e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

FS
type: SiteQuality
SIO_000300: 6.812e0

DP
type: SiteQuality
SIO_000300: 5.429135e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.216e0

QD
type: SiteQuality
SIO_000300: 2.7e0

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQ
type: SiteQuality
SIO_000300: 2.923e1

GenotypeQuality
all individuals: 656
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.429135e6

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.216e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.596e0

FS
type: SiteQuality
SIO_000300: 6.812e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

QD
type: SiteQuality
SIO_000300: 2.7e0

MQ
type: SiteQuality
SIO_000300: 2.923e1

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63978
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1113e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e0

VQSLOD
type: SiteQuality
SIO_000300: -5.002e0

DP
type: SiteQuality
SIO_000300: 5.428708e6

MQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.844e0

QD
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 2.929e1

GenotypeQuality
all individuals: 921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 19

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.973768233894697e-4
allele num: 63892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-4
allele num: 6586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 5.426404e6

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

MQ
type: SiteQuality
SIO_000300: 2.926e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

QD
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: -4.69e0

FS
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.449e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 3.141e1

QD
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.073e0

DP
type: SiteQuality
SIO_000300: 5.425449e6

FS
type: SiteQuality
SIO_000300: 1.629e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
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variant carriers: 0

GenotypeQuality
all individuals: 919
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565582240035069e-5
allele num: 63874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.031e0

MQ
type: SiteQuality
SIO_000300: 2.915e1

MQRankSum
type: SiteQuality
SIO_000300: -1.508e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.939e0

VQSLOD
type: SiteQuality
SIO_000300: -5.751e0

DP
type: SiteQuality
SIO_000300: 5.425213e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.87e-1

GenotypeQuality
all individuals: 1855
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 117
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GenotypeQuality
all individuals: 1111
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variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.7e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.568e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.281e0

DP
type: SiteQuality
SIO_000300: 5.424677e6

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

MQ
type: SiteQuality
SIO_000300: 2.886e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 913
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GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.879993733354222e-4
allele num: 63830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

MQ
type: SiteQuality
SIO_000300: 2.919e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.07e-1

DP
type: SiteQuality
SIO_000300: 5.424097e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.485130111524163e-4
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63832
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -5.347e0

MQ
type: SiteQuality
SIO_000300: 2.885e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 50492
bin: 9.75e1
variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.815305885089556e-4
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.614000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

DP
type: SiteQuality
SIO_000300: 5.422643e6

MQ
type: SiteQuality
SIO_000300: 3.212e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

FS
type: SiteQuality
SIO_000300: 5.888e0

GenotypeQuality
all individuals: 664
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567545537197856e-5
allele num: 63794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e0

FS
type: SiteQuality
SIO_000300: 5.888e0

DP
type: SiteQuality
SIO_000300: 5.422643e6

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.614000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

QD
type: SiteQuality
SIO_000300: 1.71e0

MQ
type: SiteQuality
SIO_000300: 3.212e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

GenotypeQuality
all individuals: 1003
bin: 6.75e1
variant carriers: 120

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 68

GenotypeQuality
all individuals: 802
bin: 7.75e1
variant carriers: 120

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 74

GenotypeQuality
all individuals: 552
bin: 2.5e0
variant carriers: 46

GenotypeQuality
all individuals: 514
bin: 8.75e1
variant carriers: 110

GenotypeQuality
all individuals: 1606
bin: 6.25e1
variant carriers: 100

GenotypeQuality
all individuals: 830
bin: 8.25e1
variant carriers: 130

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 84

GenotypeQuality
all individuals: 954
bin: 9.25e1
variant carriers: 160

GenotypeQuality
all individuals: 49826
bin: 9.75e1
variant carriers: 38497

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 115

Latino
type: Population
allele count: 4147
allele frequency: 3.644112478031634e-1
allele num: 11380
num of homozygotes: 0

East Asian
type: Population
allele count: 3395
allele frequency: 4.111164930976023e-1
allele num: 8258
num of homozygotes: 0

South Asian
type: Population
allele count: 5035
allele frequency: 3.099606008372322e-1
allele num: 16244
num of homozygotes: 0

African
type: Population
allele count: 1849
allele frequency: 2.182483474976393e-1
allele num: 8472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2587
allele frequency: 3.962928921568628e-1
allele num: 6528
num of homozygotes: 0

Other
type: Population
allele count: 322
allele frequency: 3.709677419354839e-1
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22688
allele frequency: 3.593853952162205e-1
allele num: 63130
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

DP
type: SiteQuality
SIO_000300: 5.401634e6

MQ
type: SiteQuality
SIO_000300: 2.917e1

MQRankSum
type: SiteQuality
SIO_000300: -3.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e0

FS
type: SiteQuality
SIO_000300: 1.5854e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.405e1

QD
type: SiteQuality
SIO_000300: 5.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeQuality
all individuals: 1109
bin: 6.75e1
variant carriers: 0