1-92430314-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430314
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430314
    reference: chr 1
allele count: 1
allele frequency: 8.736065974770241e-6
allele num: 114468
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.104A>G
  hgvsp: ENSP00000446599.1:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.323A>G
  hgvsp: ENSP00000400002.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.323A>G
  hgvsp: ENSP00000410587.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.323A>G
  hgvsp: ENSP00000396351.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1811A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.323A>G
  hgvsp: ENSP00000416714.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.323A>G
  hgvsp: ENSP00000404969.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.323A>G
  hgvsp: ENSP00000387822.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.104A>G
  hgvsp: ENSP00000359416.2:p.Tyr35Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.323A>G
  hgvsp: ENSP00000354568.3:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.323A>G
  hgvsp: ENSP00000384051.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10912
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr108Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-92430315-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430315
    reference: chr 1
allele count: 1
allele frequency: 8.737134569346637e-6
allele num: 114454
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.324T>C
  hgvsp: ENST00000440509.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.324T>C
  hgvsp: ENST00000448194.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.324T>C
  hgvsp: ENST00000362005.3:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1812T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.324T>C
  hgvsp: ENST00000402388.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.324T>C
  hgvsp: ENST00000399546.2:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.324T>C
  hgvsp: ENST00000427104.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.105T>C
  hgvsp: ENST00000370389.2:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.324T>C
  hgvsp: ENST00000423434.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.324T>C
  hgvsp: ENST00000426141.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.105T>C
  hgvsp: ENST00000552654.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr108Tyr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-92430331-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430331
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430331
    reference: chr 1
allele count: 1
allele frequency: 8.8467390919707e-6
allele num: 113036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1828C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+10C>T
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-92430333-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430333
    reference: chr 1
allele count: 112
allele frequency: 9.918702066986664e-4
allele num: 112918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1830T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+12T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34224
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10695
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-92430333-TTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430331
    reference: chr 1
allele count: 2
allele frequency: 1.77119679767619e-5
allele num: 112918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+14_111+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1832_192+1833delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+14_111+15delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+14_330+15delAT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: TTA
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

1-92430337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430337
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430337
    reference: chr 1
allele count: 1
allele frequency: 8.889521032606763e-6
allele num: 112492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1834G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+16G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+16G>A
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

1-92430337-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430337
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430337
    reference: chr 1
allele count: 8
allele frequency: 7.11161682608541e-5
allele num: 112492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1834G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+16G>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33781
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

1-92430346-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430346
    reference: chr 1
allele count: 1
allele frequency: 8.955437741796819e-6
allele num: 111664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1843G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+25G>T
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

1-92430365-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92430365
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92430365
    reference: chr 1
allele count: 1
allele frequency: 9.152145262849612e-6
allele num: 109264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.111+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.111+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.192+1862A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.330+44A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

1-92433664-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433664
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433664
    reference: chr 1
allele count: 1
allele frequency: 9.02967150055081e-6
allele num: 110746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-39T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13347
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5896
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-92433666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433666
    reference: chr 1
allele count: 1
allele frequency: 9.035872413481521e-6
allele num: 110670
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-37C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-37C>T
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22055
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

1-92433670-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433670
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433670
    reference: chr 1
allele count: 26
allele frequency: 2.337414819209954e-4
allele num: 111234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-33A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 25199
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11117
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5384
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-92433679-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433679
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433679
    reference: chr 1
allele count: 1
allele frequency: 8.843140376010329e-6
allele num: 113082
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-24T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-24T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-92433684-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433684
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433684
    reference: chr 1
allele count: 2
allele frequency: 1.748771488029659e-5
allele num: 114366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-19T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-92433686-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433686
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433686
    reference: chr 1
allele count: 1
allele frequency: 8.698980479487804e-6
allele num: 114956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-17T>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-17T>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

1-92433689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433689
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433689
    reference: chr 1
allele count: 3
allele frequency: 2.588438308886972e-5
allele num: 115900
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-14A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-14A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37049
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45142
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-92433694-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433694
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433694
    reference: chr 1
allele count: 13
allele frequency: 1.108042685213597e-4
allele num: 117324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-9A>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-92433698-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433698
    reference: chr 1
allele count: 1
allele frequency: 8.449799739746167e-6
allele num: 118346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331-5T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.331-5T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

1-92433703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433703
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433703
    reference: chr 1
allele count: 1
allele frequency: 8.379701012267883e-6
allele num: 119336
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.331C>T
  hgvsp: ENSP00000354568.3:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.331C>T
  hgvsp: ENSP00000410587.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.331C>T
  hgvsp: ENSP00000400002.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.331C>T
  hgvsp: ENSP00000384051.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.331C>T
  hgvsp: ENSP00000396351.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.331C>T
  hgvsp: ENSP00000404969.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.112C>T
  hgvsp: ENSP00000446599.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.193C>T
  hgvsp: ENSP00000378038.3:p.Pro65Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.112C>T
  hgvsp: ENSP00000359416.2:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.331C>T
  hgvsp: ENSP00000416714.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.331C>T
  hgvsp: ENSP00000387822.1:p.Pro111Ser
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro111Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-92433707-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433707
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433707
    reference: chr 1
allele count: 1
allele frequency: 8.343763037129745e-6
allele num: 119850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.335G>T
  hgvsp: ENSP00000387822.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.335G>T
  hgvsp: ENSP00000404969.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.335G>T
  hgvsp: ENSP00000396351.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.335G>T
  hgvsp: ENSP00000354568.3:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.335G>T
  hgvsp: ENSP00000384051.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.335G>T
  hgvsp: ENSP00000400002.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.335G>T
  hgvsp: ENSP00000416714.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.335G>T
  hgvsp: ENSP00000410587.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.197G>T
  hgvsp: ENSP00000378038.3:p.Gly66Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.116G>T
  hgvsp: ENSP00000359416.2:p.Gly39Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.116G>T
  hgvsp: ENSP00000446599.1:p.Gly39Val
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly112Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ

1-92433708-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433708
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433708
    reference: chr 1
allele count: 3
allele frequency: 2.501459184524306e-5
allele num: 119930
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.336A>G
  hgvsp: ENST00000440509.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.198A>G
  hgvsp: ENST00000394530.3:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.336A>G
  hgvsp: ENST00000426141.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.336A>G
  hgvsp: ENST00000427104.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.336A>G
  hgvsp: ENST00000448194.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.336A>G
  hgvsp: ENST00000399546.2:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.336A>G
  hgvsp: ENST00000362005.3:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.336A>G
  hgvsp: ENST00000402388.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.117A>G
  hgvsp: ENST00000370389.2:c.117A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.336A>G
  hgvsp: ENST00000423434.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.117A>G
  hgvsp: ENST00000552654.1:c.117A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40605
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly112Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-92433721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433721
    reference: chr 1
allele count: 23
allele frequency: 1.907890370960249e-4
allele num: 120552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.130C>T
  hgvsp: ENSP00000446599.1:p.Leu44Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.130C>T
  hgvsp: ENSP00000359416.2:p.Leu44Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.349C>T
  hgvsp: ENSP00000416714.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.349C>T
  hgvsp: ENSP00000400002.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.349C>T
  hgvsp: ENSP00000404969.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.349C>T
  hgvsp: ENSP00000354568.3:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.349C>T
  hgvsp: ENSP00000410587.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.349C>T
  hgvsp: ENSP00000387822.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.349C>T
  hgvsp: ENSP00000396351.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.211C>T
  hgvsp: ENSP00000378038.3:p.Leu71Phe
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.349C>T
  hgvsp: ENSP00000384051.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 40770
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu117Phe
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

1-92433725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433725
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433725
    reference: chr 1
allele count: 2
allele frequency: 1.657577616071872e-5
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.353T>C
  hgvsp: ENSP00000400002.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.215T>C
  hgvsp: ENSP00000378038.3:p.Met72Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.353T>C
  hgvsp: ENSP00000387822.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.353T>C
  hgvsp: ENSP00000354568.3:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.353T>C
  hgvsp: ENSP00000404969.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.134T>C
  hgvsp: ENSP00000359416.2:p.Met45Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.353T>C
  hgvsp: ENSP00000384051.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.134T>C
  hgvsp: ENSP00000446599.1:p.Met45Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.353T>C
  hgvsp: ENSP00000410587.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.353T>C
  hgvsp: ENSP00000416714.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.353T>C
  hgvsp: ENSP00000396351.1:p.Met118Thr
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met118Thr
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-92433728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433728
    reference: chr 1
allele count: 3
allele frequency: 2.485007123687088e-5
allele num: 120724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.356C>T
  hgvsp: ENSP00000400002.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.137C>T
  hgvsp: ENSP00000359416.2:p.Ala46Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.356C>T
  hgvsp: ENSP00000410587.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.137C>T
  hgvsp: ENSP00000446599.1:p.Ala46Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.356C>T
  hgvsp: ENSP00000384051.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.356C>T
  hgvsp: ENSP00000354568.3:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.218C>T
  hgvsp: ENSP00000378038.3:p.Ala73Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.356C>T
  hgvsp: ENSP00000416714.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.356C>T
  hgvsp: ENSP00000387822.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.356C>T
  hgvsp: ENSP00000404969.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.356C>T
  hgvsp: ENSP00000396351.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala119Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

1-92433760-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433760
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433760
    reference: chr 1
allele count: 31
allele frequency: 2.562279933215413e-4
allele num: 120986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.388T>C
  hgvsp: ENST00000399546.2:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.388T>C
  hgvsp: ENST00000448194.1:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.388T>C
  hgvsp: ENST00000440509.1:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.388T>C
  hgvsp: ENST00000426141.1:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.388T>C
  hgvsp: ENST00000423434.1:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.169T>C
  hgvsp: ENST00000370389.2:c.169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.388T>C
  hgvsp: ENST00000427104.1:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.388T>C
  hgvsp: ENST00000362005.3:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.250T>C
  hgvsp: ENST00000394530.3:c.250T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.388T>C
  hgvsp: ENST00000402388.1:c.388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.169T>C
  hgvsp: ENST00000552654.1:c.169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu130Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-92433762-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433762
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433762
    reference: chr 1
allele count: 10
allele frequency: 8.266239026567693e-5
allele num: 120974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.390A>G
  hgvsp: ENST00000426141.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.171A>G
  hgvsp: ENST00000552654.1:c.171A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.252A>G
  hgvsp: ENST00000394530.3:c.252A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.390A>G
  hgvsp: ENST00000362005.3:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.390A>G
  hgvsp: ENST00000427104.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.171A>G
  hgvsp: ENST00000370389.2:c.171A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.390A>G
  hgvsp: ENST00000440509.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.390A>G
  hgvsp: ENST00000399546.2:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.390A>G
  hgvsp: ENST00000448194.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.390A>G
  hgvsp: ENST00000402388.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.390A>G
  hgvsp: ENST00000423434.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu130Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP

1-92433770-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433770
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433770
    reference: chr 1
allele count: 5
allele frequency: 4.134554956504482e-5
allele num: 120932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.398T>A
  hgvsp: ENSP00000416714.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.179T>A
  hgvsp: ENSP00000359416.2:p.Met60Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.398T>A
  hgvsp: ENSP00000354568.3:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000446599
  ensembl transcript: ENST00000552654
  gene symbol: BRDT
  hgvsc: ENST00000552654.1:c.179T>A
  hgvsp: ENSP00000446599.1:p.Met60Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.260T>A
  hgvsp: ENSP00000378038.3:p.Met87Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.398T>A
  hgvsp: ENSP00000410587.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.398T>A
  hgvsp: ENSP00000396351.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.398T>A
  hgvsp: ENSP00000404969.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.398T>A
  hgvsp: ENSP00000400002.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.398T>A
  hgvsp: ENSP00000387822.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.398T>A
  hgvsp: ENSP00000384051.1:p.Met133Lys
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Met133Lys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-92433788-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433788
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433788
    reference: chr 1
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.416T>A
  hgvsp: ENSP00000416714.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.416T>A
  hgvsp: ENSP00000400002.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.197T>A
  hgvsp: ENSP00000359416.2:p.Val66Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.416T>A
  hgvsp: ENSP00000387822.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.416T>A
  hgvsp: ENSP00000354568.3:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.416T>A
  hgvsp: ENSP00000410587.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.416T>A
  hgvsp: ENSP00000396351.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.416T>A
  hgvsp: ENSP00000384051.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.278T>A
  hgvsp: ENSP00000378038.3:p.Val93Asp
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.416T>A
  hgvsp: ENSP00000404969.1:p.Val139Asp
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val139Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-92433789-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433789
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433789
    reference: chr 1
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.198T>C
  hgvsp: ENST00000370389.2:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.417T>C
  hgvsp: ENST00000427104.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.417T>C
  hgvsp: ENST00000448194.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.417T>C
  hgvsp: ENST00000426141.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.417T>C
  hgvsp: ENST00000402388.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.417T>C
  hgvsp: ENST00000399546.2:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.417T>C
  hgvsp: ENST00000440509.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.417T>C
  hgvsp: ENST00000362005.3:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.417T>C
  hgvsp: ENST00000423434.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.279T>C
  hgvsp: ENST00000394530.3:c.279T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val139Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

1-92433792-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433792
    reference: chr 1
allele count: 4
allele frequency: 3.323087147960455e-5
allele num: 120370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.201G>C
  hgvsp: ENST00000370389.2:c.201G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.420G>C
  hgvsp: ENST00000362005.3:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.420G>C
  hgvsp: ENST00000399546.2:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.420G>C
  hgvsp: ENST00000448194.1:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.420G>C
  hgvsp: ENST00000427104.1:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.420G>C
  hgvsp: ENST00000440509.1:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.420G>C
  hgvsp: ENST00000426141.1:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.282G>C
  hgvsp: ENST00000394530.3:c.282G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.420G>C
  hgvsp: ENST00000402388.1:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.420G>C
  hgvsp: ENST00000423434.1:c.420G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39877
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val140Val
num of homozygotes: 1
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-92433793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433793
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433793
    reference: chr 1
allele count: 1
allele frequency: 8.308408109006315e-6
allele num: 120360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.421G>A
  hgvsp: ENSP00000410587.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.421G>A
  hgvsp: ENSP00000384051.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.421G>A
  hgvsp: ENSP00000404969.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.421G>A
  hgvsp: ENSP00000416714.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.421G>A
  hgvsp: ENSP00000354568.3:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.421G>A
  hgvsp: ENSP00000387822.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.202G>A
  hgvsp: ENSP00000359416.2:p.Gly68Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.421G>A
  hgvsp: ENSP00000400002.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.283G>A
  hgvsp: ENSP00000378038.3:p.Gly95Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.421G>A
  hgvsp: ENSP00000396351.1:p.Gly141Ser
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly141Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

1-92433840-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433840
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433840
    reference: chr 1
allele count: 1
allele frequency: 1.023080700605664e-5
allele num: 97744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+23T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11444
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-92433848-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433848
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433848
    reference: chr 1
allele count: 1
allele frequency: 1.091321808975031e-5
allele num: 91632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+31T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23315
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

1-92433851-C-CTATCTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433851
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433857
    reference: chr 1
allele count: 1
allele frequency: 1.126912934706665e-5
allele num: 88738
alternate allele: CTATCTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+35_307+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+35_226+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+35_445+36insATCTAT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-92433853-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433854
    reference: chr 1
allele count: 1
allele frequency: 1.167869572326163e-5
allele num: 85626
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+43dupT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+43dupT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23730
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-92433853-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433852
    reference: chr 1
allele count: 1
allele frequency: 1.167869572326163e-5
allele num: 85626
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+43delT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+43delT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13298
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23647
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: CT
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-92433855-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433855
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433855
    reference: chr 1
allele count: 1
allele frequency: 1.178883832787117e-5
allele num: 84826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+38T>A
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

1-92433862-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433862
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433862
    reference: chr 1
allele count: 2
allele frequency: 2.494014365522746e-5
allele num: 80192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+45C>T
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22745
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15728
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

1-92433863-CCTAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433859
    reference: chr 1
allele count: 6
allele frequency: 7.495128166691651e-5
allele num: 80052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+53_226+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+53_307+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+53_445+56delATCT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22752
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15850
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7302
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4298
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: CCTAT
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-92433866-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433866
    reference: chr 1
allele count: 2
allele frequency: 2.614857621002536e-5
allele num: 76486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+49A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21330
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5610
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4233
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

1-92433868-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433868
    reference: chr 1
allele count: 1
allele frequency: 1.327703868929074e-5
allele num: 75318
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+51C>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

1-92433874-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433874
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433872
    reference: chr 1
allele count: 24
allele frequency: 3.342432176480419e-4
allele num: 71804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+58_307+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+58_226+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+58_445+59delAT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19741
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8055
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19519
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 3.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: CAT
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-92433875-A-ATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433875
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433877
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 70546
alternate allele: ATG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+68_445+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+68_226+69dupGT
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+68_307+69dupGT
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19972
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

1-92433875-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92433875
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92433875
    reference: chr 1
allele count: 9
allele frequency: 1.275763331726816e-4
allele num: 70546
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.226+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.307+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.445+58A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19972
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19354
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-92441777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441777
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441777
    reference: chr 1
allele count: 1
allele frequency: 9.149967975112088e-6
allele num: 109290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-46G>A
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7975
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-92441779-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441779
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441779
    reference: chr 1
allele count: 1
allele frequency: 9.119428029473991e-6
allele num: 109656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-44A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-44A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2611
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-92441780-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441780
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441780
    reference: chr 1
allele count: 1
allele frequency: 9.123588124737696e-6
allele num: 109606
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-43C>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-92441781-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441781
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441781
    reference: chr 1
allele count: 4
allele frequency: 3.643650938240116e-5
allele num: 109780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-42T>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-42T>A
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19277
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-92441783-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441783
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441783
    reference: chr 1
allele count: 1
allele frequency: 9.103322712790168e-6
allele num: 109850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-40T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13057
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27621
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-92441792-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441792
    reference: chr 1
allele count: 5
allele frequency: 4.519651444480601e-5
allele num: 110628
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-31A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14037
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24062
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

1-92441796-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441796
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441796
    reference: chr 1
allele count: 1
allele frequency: 9.001386213476875e-6
allele num: 111094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-27A>G
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-27A>G
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

1-92441807-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441807
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441807
    reference: chr 1
allele count: 157
allele frequency: 1.392782371101096e-3
allele num: 112724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-16G>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14985
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26779
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6503
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 1
num of homozygotes: 4
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

1-92441808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441808
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441808
    reference: chr 1
allele count: 1
allele frequency: 8.861006255870417e-6
allele num: 112854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-15C>T
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37735
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-92441811-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441811
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441811
    reference: chr 1
allele count: 1
allele frequency: 8.804366966015144e-6
allele num: 113580
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-12A>T
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-12A>T
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38220
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum

1-92441818-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441818
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441818
    reference: chr 1
allele count: 1
allele frequency: 8.722197993894462e-6
allele num: 114650
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-5T>C
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
hgvs: c.446-5T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

1-92441822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441822
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441822
    reference: chr 1
allele count: 9
allele frequency: 7.795987665015072e-5
allele num: 115444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.308-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.227-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.446-1G>A
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6849
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
hgvs: c.446-1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-92441824-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441824
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441824
    reference: chr 1
allele count: 1
allele frequency: 8.644387199391435e-6
allele num: 115682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.447C>A
  hgvsp: ENST00000427104.1:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.447C>A
  hgvsp: ENST00000448194.1:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.309C>A
  hgvsp: ENST00000394530.3:c.309C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.447C>A
  hgvsp: ENST00000402388.1:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.447C>A
  hgvsp: ENST00000426141.1:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.228C>A
  hgvsp: ENST00000370389.2:c.228C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.447C>A
  hgvsp: ENST00000399546.2:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.447C>A
  hgvsp: ENST00000362005.3:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.447C>A
  hgvsp: ENST00000440509.1:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.447C>A
  hgvsp: ENST00000423434.1:c.447C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6737
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.447C>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

1-92441826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441826
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441826
    reference: chr 1
allele count: 2
allele frequency: 1.721170395869191e-5
allele num: 116200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.449C>T
  hgvsp: ENSP00000354568.3:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.449C>T
  hgvsp: ENSP00000396351.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.449C>T
  hgvsp: ENSP00000384051.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.449C>T
  hgvsp: ENSP00000410587.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.311C>T
  hgvsp: ENSP00000378038.3:p.Thr104Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.449C>T
  hgvsp: ENSP00000387822.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.230C>T
  hgvsp: ENSP00000359416.2:p.Thr77Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.449C>T
  hgvsp: ENSP00000400002.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.449C>T
  hgvsp: ENSP00000416714.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.449C>T
  hgvsp: ENSP00000404969.1:p.Thr150Ile
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr150Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-92441834-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441834
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441834
    reference: chr 1
allele count: 1
allele frequency: 8.500510030601837e-6
allele num: 117640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.457A>C
  hgvsp: ENSP00000404969.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.457A>C
  hgvsp: ENSP00000396351.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.457A>C
  hgvsp: ENSP00000387822.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.457A>C
  hgvsp: ENSP00000384051.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.319A>C
  hgvsp: ENSP00000378038.3:p.Asn107His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.238A>C
  hgvsp: ENSP00000359416.2:p.Asn80His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.457A>C
  hgvsp: ENSP00000410587.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.457A>C
  hgvsp: ENSP00000416714.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.457A>C
  hgvsp: ENSP00000354568.3:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.457A>C
  hgvsp: ENSP00000400002.1:p.Asn153His
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn153His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

1-92441837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441837
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441837
    reference: chr 1
allele count: 1
allele frequency: 8.471991595784337e-6
allele num: 118036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.322A>G
  hgvsp: ENSP00000378038.3:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.460A>G
  hgvsp: ENSP00000387822.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.460A>G
  hgvsp: ENSP00000384051.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.460A>G
  hgvsp: ENSP00000416714.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.460A>G
  hgvsp: ENSP00000400002.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.241A>G
  hgvsp: ENSP00000359416.2:p.Ile81Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.460A>G
  hgvsp: ENSP00000404969.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.460A>G
  hgvsp: ENSP00000396351.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.460A>G
  hgvsp: ENSP00000410587.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.460A>G
  hgvsp: ENSP00000354568.3:p.Ile154Val
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile154Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-92441842-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441842
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441842
    reference: chr 1
allele count: 4
allele frequency: 3.368307593849471e-5
allele num: 118754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.465T>C
  hgvsp: ENST00000426141.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.327T>C
  hgvsp: ENST00000394530.3:c.327T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.465T>C
  hgvsp: ENST00000402388.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.465T>C
  hgvsp: ENST00000440509.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000400002
  ensembl transcript: ENST00000427104
  gene symbol: BRDT
  hgvsc: ENST00000427104.1:c.465T>C
  hgvsp: ENST00000427104.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.465T>C
  hgvsp: ENST00000399546.2:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000410587
  ensembl transcript: ENST00000448194
  gene symbol: BRDT
  hgvsc: ENST00000448194.1:c.465T>C
  hgvsp: ENST00000448194.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.465T>C
  hgvsp: ENST00000423434.1:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.246T>C
  hgvsp: ENST00000370389.2:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.465T>C
  hgvsp: ENST00000362005.3:c.465T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16444
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala155Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

1-92441846-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441846
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441846
    reference: chr 1
allele count: 1
allele frequency: 8.387150884844418e-6
allele num: 119230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.469T>C
  hgvsp: ENSP00000396351.1:p.Ser157Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.469T>C
  hgvsp: ENSP00000384051.1:p.Ser157Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.469T>C
  hgvsp: ENSP00000354568.3:p.Ser157Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.469T>C
  hgvsp: ENSP00000387822.1:p.Ser157Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.469T>C
  hgvsp: ENSP00000416714.1:p.Ser157Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.469T>C
  hgvsp: ENSP00000404969.1:p.Ser157Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.250T>C
  hgvsp: ENSP00000359416.2:p.Ser84Pro
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.331T>C
  hgvsp: ENSP00000378038.3:p.Ser111Pro
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41874
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser157Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-92441859-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441859
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441859
    reference: chr 1
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.482A>C
  hgvsp: ENSP00000396351.1:p.Glu161Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.482A>C
  hgvsp: ENSP00000354568.3:p.Glu161Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.482A>C
  hgvsp: ENSP00000384051.1:p.Glu161Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.482A>C
  hgvsp: ENSP00000404969.1:p.Glu161Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.482A>C
  hgvsp: ENSP00000387822.1:p.Glu161Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.344A>C
  hgvsp: ENSP00000378038.3:p.Glu115Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.263A>C
  hgvsp: ENSP00000359416.2:p.Glu88Ala
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.482A>C
  hgvsp: ENSP00000416714.1:p.Glu161Ala
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6911
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu161Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

1-92441863-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441863
    reference: chr 1
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.486A>G
  hgvsp: ENST00000423434.1:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.486A>G
  hgvsp: ENST00000426141.1:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.348A>G
  hgvsp: ENST00000394530.3:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.486A>G
  hgvsp: ENST00000399546.2:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.486A>G
  hgvsp: ENST00000362005.3:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.486A>G
  hgvsp: ENST00000402388.1:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.267A>G
  hgvsp: ENST00000370389.2:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.486A>G
  hgvsp: ENST00000440509.1:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys162Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

1-92441870-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441870
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441870
    reference: chr 1
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.493C>T
  hgvsp: ENSP00000396351.1:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.355C>T
  hgvsp: ENSP00000378038.3:p.Pro119Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.493C>T
  hgvsp: ENSP00000387822.1:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.493C>T
  hgvsp: ENSP00000416714.1:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.493C>T
  hgvsp: ENSP00000384051.1:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.493C>T
  hgvsp: ENSP00000354568.3:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.274C>T
  hgvsp: ENSP00000359416.2:p.Pro92Ser
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.493C>T
  hgvsp: ENSP00000404969.1:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro165Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-92441871-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441871
    reference: chr 1
allele count: 9
allele frequency: 7.445400397088021e-5
allele num: 120880
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.494C>A
  hgvsp: ENSP00000354568.3:p.Pro165His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.275C>A
  hgvsp: ENSP00000359416.2:p.Pro92His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.494C>A
  hgvsp: ENSP00000384051.1:p.Pro165His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.356C>A
  hgvsp: ENSP00000378038.3:p.Pro119His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.494C>A
  hgvsp: ENSP00000387822.1:p.Pro165His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.494C>A
  hgvsp: ENSP00000416714.1:p.Pro165His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.494C>A
  hgvsp: ENSP00000396351.1:p.Pro165His
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.494C>A
  hgvsp: ENSP00000404969.1:p.Pro165His
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro165His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

1-92441871-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441871
    reference: chr 1
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.494C>G
  hgvsp: ENSP00000416714.1:p.Pro165Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.275C>G
  hgvsp: ENSP00000359416.2:p.Pro92Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.494C>G
  hgvsp: ENSP00000387822.1:p.Pro165Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.494C>G
  hgvsp: ENSP00000354568.3:p.Pro165Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.494C>G
  hgvsp: ENSP00000396351.1:p.Pro165Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.494C>G
  hgvsp: ENSP00000384051.1:p.Pro165Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.356C>G
  hgvsp: ENSP00000378038.3:p.Pro119Arg
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.494C>G
  hgvsp: ENSP00000404969.1:p.Pro165Arg
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43030
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro165Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP

1-92441875-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441875
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441875
    reference: chr 1
allele count: 15
allele frequency: 1.239853862558066e-4
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.360C>T
  hgvsp: ENST00000394530.3:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.279C>T
  hgvsp: ENST00000370389.2:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.498C>T
  hgvsp: ENST00000402388.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.498C>T
  hgvsp: ENST00000423434.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.498C>T
  hgvsp: ENST00000426141.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.498C>T
  hgvsp: ENST00000362005.3:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.498C>T
  hgvsp: ENST00000440509.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.498C>T
  hgvsp: ENST00000399546.2:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser166Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-92441876-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 92441876
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 92441876
    reference: chr 1
allele count: 293
allele frequency: 2.421167448932373e-3
allele num: 121016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000416714
  ensembl transcript: ENST00000440509
  gene symbol: BRDT
  hgvsc: ENST00000440509.1:c.499G>A
  hgvsp: ENSP00000416714.1:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000378038
  ensembl transcript: ENST00000394530
  gene symbol: BRDT
  hgvsc: ENST00000394530.3:c.361G>A
  hgvsp: ENSP00000378038.3:p.Ala121Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000396351
  ensembl transcript: ENST00000423434
  gene symbol: BRDT
  hgvsc: ENST00000423434.1:c.499G>A
  hgvsp: ENSP00000396351.1:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000359416
  ensembl transcript: ENST00000370389
  gene symbol: BRDT
  hgvsc: ENST00000370389.2:c.280G>A
  hgvsp: ENSP00000359416.2:p.Ala94Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000354568
  ensembl transcript: ENST00000362005
  gene symbol: BRDT
  hgvsc: ENST00000362005.3:c.499G>A
  hgvsp: ENSP00000354568.3:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000384051
  ensembl transcript: ENST00000402388
  gene symbol: BRDT
  hgvsc: ENST00000402388.1:c.499G>A
  hgvsp: ENSP00000384051.1:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000387822
  ensembl transcript: ENST00000399546
  gene symbol: BRDT
  hgvsc: ENST00000399546.2:c.499G>A
  hgvsp: ENSP00000387822.1:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/1105
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137948
  ensembl protein: ENSP00000404969
  ensembl transcript: ENST00000426141
  gene symbol: BRDT
  hgvsc: ENST00000426141.1:c.499G>A
  hgvsp: ENSP00000404969.1:p.Ala167Thr
  variant of: http://identifiers.org/hgnc/1105
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 29875
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 17182
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala167Thr
num of homozygotes: 3
reference allele: G

GenotypeDepth
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4907
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55574224462491e-5
allele num: 64278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: -2.862e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.624e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.16e-1

DP
type: SiteQuality
SIO_000300: 1.453835e6

FS
type: SiteQuality
SIO_000300: 1.4631e1

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

QD
type: SiteQuality
SIO_000300: 8.300000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.71e-1

GenotypeDepth
all individuals: 276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4920
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40678
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555790652809758e-5
allele num: 64276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13226
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.691e0

FS
type: SiteQuality
SIO_000300: 5.17e0

QD
type: SiteQuality
SIO_000300: 1.002e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.842e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.428e0

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.454009e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

GenotypeQuality
all individuals: 192
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.127438231469441e-5
allele num: 12304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.216e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.73e-1

QD
type: SiteQuality
SIO_000300: 5.92e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-1

DP
type: SiteQuality
SIO_000300: 1.431373e6

FS
type: SiteQuality
SIO_000300: 6.045e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeQuality
all individuals: 5640
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38514
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2800
bin: 9.75e1
variant carriers: 111

GenotypeQuality
all individuals: 1630
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 110
allele frequency: 1.15716389648643e-2
allele num: 9506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63828
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.75377060680463e-4
allele num: 11404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12232
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.429923e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 1.176e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.259e1

GenotypeQuality
all individuals: 511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5640
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2800
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38514
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.133421069123268e-5
allele num: 63828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.176e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.429923e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.259e1

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
all individuals: 840
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4366
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569612305760477e-5
allele num: 63710
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.224e1

VQSLOD
type: SiteQuality
SIO_000300: -6.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

DP
type: SiteQuality
SIO_000300: 1.421535e6

FS
type: SiteQuality
SIO_000300: 1.1795e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

GenotypeQuality
all individuals: 38022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63710
num of homozygotes: 0

Latino
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allele count: 8
allele frequency: 7.016312927556569e-4
allele num: 11402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11964
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.421535e6

MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.1795e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.43e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.05977108944468e-4
allele num: 9436
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -2.327e0

ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.102e0

VQSLOD
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SIO_000300: -7.193000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

DP
type: SiteQuality
SIO_000300: 1.406953e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.920634920634921e-5
allele num: 10080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.58e-1

QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 1.357235e6

VQSLOD
type: SiteQuality
SIO_000300: 8.02e-1

ClippingRankSum
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SIO_000300: 6.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.281065846784525e-4
allele num: 7806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 1.319815e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

FS
type: SiteQuality
SIO_000300: 4.393e0

VQSLOD
type: SiteQuality
SIO_000300: -1.23e0

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

QD
type: SiteQuality
SIO_000300: 5.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.645602948920484e-5
allele num: 60768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
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SIO_000300: 0.0e0

FS
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SIO_000300: 2.801e0

BaseQRankSum
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SIO_000300: -2.105e0

VQSLOD
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SIO_000300: -1.702e0

MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.333608e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 25
allele frequency: 2.685284640171858e-3
allele num: 9310
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.137426900584795e-5
allele num: 10944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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FS
type: SiteQuality
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DP
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SIO_000300: 1.366604e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.611032349529579e-5
allele num: 62072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15044
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.183598102575531e-5
allele num: 62822
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.485186e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

VQSLOD
type: SiteQuality
SIO_000300: -7.141e-1

FS
type: SiteQuality
SIO_000300: 9.198e0

QD
type: SiteQuality
SIO_000300: 1.73e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.218917601170161e-4
allele num: 8204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63136
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.71e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

MQRankSum
type: SiteQuality
SIO_000300: -1.194e0

BaseQRankSum
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SIO_000300: 2.98e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 7.073e0

DP
type: SiteQuality
SIO_000300: 1.49872e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63672
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.090871625798475e-4
allele num: 9706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

DP
type: SiteQuality
SIO_000300: 1.519402e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 179
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.55115716324378e-4
allele num: 64468
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.757469244288225e-4
allele num: 11380
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.016466761536898e-4
allele num: 9838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

FS
type: SiteQuality
SIO_000300: 7.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.544552e6

QD
type: SiteQuality
SIO_000300: 1.564e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 619
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537799101925324e-5
allele num: 65028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15986
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9922
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

FS
type: SiteQuality
SIO_000300: 4.679e0

BaseQRankSum
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SIO_000300: 9.77e-1

MQRankSum
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SIO_000300: 9.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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DP
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SIO_000300: 1.560247e6

QD
type: SiteQuality
SIO_000300: 1.224e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.964129135113592e-5
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65616
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
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SIO_000300: 2.54e-1

QD
type: SiteQuality
SIO_000300: 1.004e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
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allele num: 8584
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South Asian
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BaseQRankSum
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SIO_000300: -3.391e0

ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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FS
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VQSLOD
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QD
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65948
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.492433061699651e-4
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

MQ
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MQRankSum
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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African
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South Asian
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allele frequency: 2.438726984514084e-4
allele num: 16402
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.866799444746213e-4
allele num: 66276
num of homozygotes: 0

ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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QD
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FS
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InbreedingCoeff
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MQRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.507340749449821e-5
allele num: 66342
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQ
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SIO_000300: 5.866e1

VQSLOD
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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SIO_000300: 1.14e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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East Asian
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South Asian
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QD
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MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 3.587962962962963e-3
allele num: 8640
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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BaseQRankSum
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QD
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FS
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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allele frequency: 9.701202949165697e-4
allele num: 10308
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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FS
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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South Asian
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Other
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Latino
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European (Finnish)
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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VQSLOD
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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SIO_000300: 9.83e-1

DP
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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SIO_000300: 1.313e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele frequency: 2.447980416156671e-4
allele num: 16340
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511944360447535e-5
allele num: 66140
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 2.51e-1

InbreedingCoeff
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ClippingRankSum
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FS
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DP
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.48720999405116e-4
allele num: 6724
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 53372
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: 2.9e-1

InbreedingCoeff
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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QD
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.006259529732766e-5
allele num: 49844
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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FS
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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South Asian
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 48184
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MQRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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DP
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FS
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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ClippingRankSum
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VQSLOD
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DP
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FS
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7562
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.175521037288431e-5
allele num: 45966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

MQ
type: SiteQuality
SIO_000300: 5.1e1

QD
type: SiteQuality
SIO_000300: 1.657e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.021446e6

VQSLOD
type: SiteQuality
SIO_000300: -1.521e0

FS
type: SiteQuality
SIO_000300: 1.616e0

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.594532506317482e-5
allele num: 43530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.543e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 9.68174e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 3
allele frequency: 4.330254041570439e-4
allele num: 6928
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.805049088359046e-4
allele num: 7130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.30170786723749e-5
allele num: 43446
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

FS
type: SiteQuality
SIO_000300: 1.463e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 9.66563e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 5.71e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41504
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.097893432465923e-4
allele num: 6456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.33e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.41129e5

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40874
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.349289454001496e-5
allele num: 10696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5318
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.694e0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
SIO_000300: 9.35926e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

QD
type: SiteQuality
SIO_000300: 1.093e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 28

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4392
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 2.936630602782071e-3
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 7.712082262210797e-5
allele num: 38900
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.396739130434783e-4
allele num: 5888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5184
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 9.16e-1

DP
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 604
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 38238
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.39e1

MQ
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.353679585752393e-4
allele num: 38238
num of homozygotes: 0

East Asian
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Other
type: Population
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 3686
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598312182335454e-5
allele num: 62566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.188e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.419714e6

VQSLOD
type: SiteQuality
SIO_000300: -9.727e-1

FS
type: SiteQuality
SIO_000300: 3.979e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.747e0

QD
type: SiteQuality
SIO_000300: 7.62e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.593625498007968e-5
allele num: 62750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.56e0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

FS
type: SiteQuality
SIO_000300: 1.944e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 1.431185e6

QD
type: SiteQuality
SIO_000300: 1.717e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2596
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.594082764777147e-5
allele num: 62732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.011e0

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.112e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.437466e6

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.582951420714941e-4
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591951095262354e-5
allele num: 62816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 1.4417e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.56e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

FS
type: SiteQuality
SIO_000300: 6.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
all individuals: 856
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6182
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variant carriers: 0

GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 608
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1770
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591444394932841e-5
allele num: 62836
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.451091e6

MQRankSum
type: SiteQuality
SIO_000300: 6.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.1e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 4.34e-1

GenotypeQuality
all individuals: 6391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.914147329766691e-5
allele num: 63178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.501005e6

MQRankSum
type: SiteQuality
SIO_000300: -2.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.93e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6489
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.084302325581395e-5
allele num: 11008
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.516937e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 150

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 153
allele frequency: 1.564097321611123e-2
allele num: 9782
num of homozygotes: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.650644990280969e-4
allele num: 11318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558117793705204e-5
allele num: 64180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.554315e6

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.23e-2

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

QD
type: SiteQuality
SIO_000300: 1.468e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 2987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557486839236208e-5
allele num: 64206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 5.297e0

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.325e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.555392e6

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6755
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64462
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.33472245374229e-5
allele num: 11998
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.108e1

MQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 1.562837e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2068
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2088
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.105e0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

DP
type: SiteQuality
SIO_000300: 1.574776e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

GenotypeQuality
all individuals: 2952
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39327
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65036
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.347417840375587e-3
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.136044880785414e-4
allele num: 11408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13038
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.236e0

FS
type: SiteQuality
SIO_000300: 1.349e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.399e1

DP
type: SiteQuality
SIO_000300: 1.584418e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.57e0

GenotypeDepth
all individuals: 1157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6883
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.593014426727411e-5
allele num: 13170
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.57e-1

QD
type: SiteQuality
SIO_000300: 1.048e1

DP
type: SiteQuality
SIO_000300: 1.588269e6

FS
type: SiteQuality
SIO_000300: 2.026e0

MQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.027e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.88e1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39834
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variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6907
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.064570500444363e-5
allele num: 65262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

DP
type: SiteQuality
SIO_000300: 1.592321e6

QD
type: SiteQuality
SIO_000300: 7.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 5.594e0

MQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.236e0

VQSLOD
type: SiteQuality
SIO_000300: -5.693e-1

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 580
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6971
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1927
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.75e1
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GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.977393245883338e-5
allele num: 14332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

DP
type: SiteQuality
SIO_000300: 1.606506e6

QD
type: SiteQuality
SIO_000300: 1.55e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2991
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 82
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 287
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GenotypeQuality
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GenotypeQuality
all individuals: 238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
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GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519849230956289e-5
allele num: 65796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.31e0

DP
type: SiteQuality
SIO_000300: 1.61047e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.399e0

QD
type: SiteQuality
SIO_000300: 1.144e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41493
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variant carriers: 0

GenotypeQuality
all individuals: 236
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GenotypeQuality
all individuals: 577
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 2084
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GenotypeQuality
all individuals: 1368
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GenotypeQuality
all individuals: 88
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GenotypeQuality
all individuals: 700
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GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
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GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7023
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variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1323
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516070345664039e-5
allele num: 65960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.998135073930998e-4
allele num: 15014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.347e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 1.618673e6

QD
type: SiteQuality
SIO_000300: 1.299e1

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512950859356088e-5
allele num: 66096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 1.623899e6

VQSLOD
type: SiteQuality
SIO_000300: -4.335e-1

QD
type: SiteQuality
SIO_000300: 1.585e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: -1.348e0

FS
type: SiteQuality
SIO_000300: 9.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.128e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.214267959234402e-5
allele num: 16092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.63857e6

MQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

QD
type: SiteQuality
SIO_000300: 1.708e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 5.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.172e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 7120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 81
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 703
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.358e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.618e1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: -2.941e-1

DP
type: SiteQuality
SIO_000300: 1.640516e6

GenotypeQuality
all individuals: 2093
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7133
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variant carriers: 0

GenotypeQuality
all individuals: 2990
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 703
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42993
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GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.126700159294204e-5
allele num: 16322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.644368e6

FS
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.78e-1

QD
type: SiteQuality
SIO_000300: 9.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

GenotypeQuality
all individuals: 281
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
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variant carriers: 0

GenotypeQuality
all individuals: 7139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 46
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2996
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 8.707430340557275e-4
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.645442e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 3.247e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

QD
type: SiteQuality
SIO_000300: 1.291e1

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.71e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.291e1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 3.247e0

DP
type: SiteQuality
SIO_000300: 1.645442e6

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 7140
bin: 6.75e1
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GenotypeQuality
all individuals: 2084
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.73370319001387e-3
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.48e-1

FS
type: SiteQuality
SIO_000300: 4.102e0

DP
type: SiteQuality
SIO_000300: 1.647249e6

MQRankSum
type: SiteQuality
SIO_000300: 7.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.054e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1