3-40275440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275440
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275440
    reference: chr 3
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1435C>T
  hgvsp: ENSP00000438297.1:p.Pro479Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1511C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1729C>T
  hgvsp: ENSP00000379519.3:p.Pro577Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10497C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.1996C>T
  hgvsp: ENSP00000398665.1:p.Pro666Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.1996C>T
  hgvsp: ENSP00000301972.6:p.Pro666Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1770C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9441
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6654
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33032
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro666Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

3-40275446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275446
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275446
    reference: chr 3
allele count: 7
allele frequency: 5.768438401318501e-5
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2002G>A
  hgvsp: ENSP00000301972.6:p.Glu668Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*51G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1517G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10491G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1441G>A
  hgvsp: ENSP00000438297.1:p.Glu481Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2002G>A
  hgvsp: ENSP00000398665.1:p.Glu668Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1735G>A
  hgvsp: ENSP00000379519.3:p.Glu579Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1776G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu668Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/3-40275451-CCCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275451
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275448
    reference: chr 3
allele count: 4
allele frequency: 3.296196189597204e-5
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1783_1785delCAC
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*58_*60delCAC
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2009_2011delCAC
  hgvsp: ENSP00000301972.6:p.Pro670del
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1448_1450delCAC
  hgvsp: ENSP00000438297.1:p.Pro483del
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10484_1906-10482delCAC
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1742_1744delCAC
  hgvsp: ENSP00000379519.3:p.Pro581del
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1524_*1526delCAC
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2009_2011delCAC
  hgvsp: ENSP00000398665.1:p.Pro670del
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro670del
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: CCCA
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-40275455-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275455
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275455
    reference: chr 3
allele count: 4
allele frequency: 3.296685183048445e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1450C>A
  hgvsp: ENSP00000438297.1:p.Gln484Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1744C>A
  hgvsp: ENSP00000379519.3:p.Gln582Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2011C>A
  hgvsp: ENSP00000398665.1:p.Gln671Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*60C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2011C>A
  hgvsp: ENSP00000301972.6:p.Gln671Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10482C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1526C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1785C>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6646
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9428
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln671Lys
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

3-40275458-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275458
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275458
    reference: chr 3
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*63G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1529G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1453G>T
  hgvsp: ENSP00000438297.1:p.Val485Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2014G>T
  hgvsp: ENSP00000301972.6:p.Val672Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1788G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2014G>T
  hgvsp: ENSP00000398665.1:p.Val672Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1747G>T
  hgvsp: ENSP00000379519.3:p.Val583Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10479G>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val672Phe
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

3-40275461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275461
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275461
    reference: chr 3
allele count: 5334
allele frequency: 4.396564514267817e-2
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1791C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2017C>T
  hgvsp: ENSP00000301972.6:p.Pro673Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*66C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1532C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2017C>T
  hgvsp: ENSP00000398665.1:p.Pro673Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1456C>T
  hgvsp: ENSP00000438297.1:p.Pro486Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1750C>T
  hgvsp: ENSP00000379519.3:p.Pro584Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10476C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 4.25e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.75e1
  variant carriers: 498
genotype depth: GenotypeDepth
  all individuals: 26345
  bin: 2.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 3.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 5.25e1
  variant carriers: 490
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 6.25e1
  variant carriers: 564
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.75e1
  variant carriers: 340
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12858
  bin: 3.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 9.75e1
  variant carriers: 688
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 5.75e1
  variant carriers: 488
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 400
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 32784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Pro673Ser
num of homozygotes: 156
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

3-40275467-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275467
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275467
    reference: chr 3
allele count: 4
allele frequency: 3.297174321606383e-5
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*72G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2023G>C
  hgvsp: ENSP00000301972.6:p.Asp675His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1538G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1462G>C
  hgvsp: ENSP00000438297.1:p.Asp488His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2023G>C
  hgvsp: ENSP00000398665.1:p.Asp675His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1797G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1756G>C
  hgvsp: ENSP00000379519.3:p.Asp586His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10470G>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10038
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3847
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp675His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

3-40275478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275478
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275478
    reference: chr 3
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2034G>A
  hgvsp: ENST00000444716.1:c.2034G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1473G>A
  hgvsp: ENST00000539167.1:c.1473G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1767G>A
  hgvsp: ENST00000396217.3:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10459G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1808G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2034G>A
  hgvsp: ENST00000302541.6:c.2034G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1549G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13987
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys678Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

3-40275491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275491
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275491
    reference: chr 3
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10446C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2047C>T
  hgvsp: ENSP00000398665.1:p.Arg683Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*96C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1821C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1562C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2047C>T
  hgvsp: ENSP00000301972.6:p.Arg683Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1780C>T
  hgvsp: ENSP00000379519.3:p.Arg594Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1486C>T
  hgvsp: ENSP00000438297.1:p.Arg496Cys
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3570
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg683Cys
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

3-40275492-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275492
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275492
    reference: chr 3
allele count: 7
allele frequency: 5.773862549077831e-5
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2048G>A
  hgvsp: ENSP00000398665.1:p.Arg683His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2048G>A
  hgvsp: ENSP00000301972.6:p.Arg683His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1781G>A
  hgvsp: ENSP00000379519.3:p.Arg594His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1822G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1487G>A
  hgvsp: ENSP00000438297.1:p.Arg496His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*97G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10445G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1563G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg683His
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD

3-40275499-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275499
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275499
    reference: chr 3
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2055A>T
  hgvsp: ENST00000444716.1:c.2055A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1788A>T
  hgvsp: ENST00000396217.3:c.1788A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1570A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*104A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1494A>T
  hgvsp: ENST00000539167.1:c.1494A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2055A>T
  hgvsp: ENST00000302541.6:c.2055A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10438A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1829A>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3812
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr685Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

3-40275506-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275506
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275506
    reference: chr 3
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10431G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1836G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2062G>C
  hgvsp: ENSP00000301972.6:p.Val688Leu
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*111G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1501G>C
  hgvsp: ENSP00000438297.1:p.Val501Leu
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1795G>C
  hgvsp: ENSP00000379519.3:p.Val599Leu
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1577G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2062G>C
  hgvsp: ENSP00000398665.1:p.Val688Leu
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val688Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

3-40275510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275510
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275510
    reference: chr 3
allele count: 4
allele frequency: 3.304856486607069e-5
allele num: 121034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1581G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1840G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2066G>A
  hgvsp: ENSP00000301972.6:p.Arg689Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1799G>A
  hgvsp: ENSP00000379519.3:p.Arg600Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1505G>A
  hgvsp: ENSP00000438297.1:p.Arg502Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2066G>A
  hgvsp: ENSP00000398665.1:p.Arg689Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10427G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*115G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg689Lys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

3-40275518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275518
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275518
    reference: chr 3
allele count: 1
allele frequency: 8.277049397430804e-6
allele num: 120816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1513G>A
  hgvsp: ENSP00000438297.1:p.Glu505Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2074G>A
  hgvsp: ENSP00000301972.6:p.Glu692Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*123G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1848G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1807G>A
  hgvsp: ENSP00000379519.3:p.Glu603Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10419G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1589G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2074G>A
  hgvsp: ENSP00000398665.1:p.Glu692Lys
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9904
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu692Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

3-40275520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275520
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275520
    reference: chr 3
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1850G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2076G>A
  hgvsp: ENST00000302541.6:c.2076G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1591G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1515G>A
  hgvsp: ENST00000539167.1:c.1515G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*125G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2076G>A
  hgvsp: ENST00000444716.1:c.2076G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1809G>A
  hgvsp: ENST00000396217.3:c.1809G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10417G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2128
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu692Glu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/3-40275521-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275521
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275521
    reference: chr 3
allele count: 5
allele frequency: 4.142982616044943e-5
allele num: 120686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2077C>A
  hgvsp: ENSP00000398665.1:p.Gln693Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1592C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*126C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1810C>A
  hgvsp: ENSP00000379519.3:p.Gln604Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2077C>A
  hgvsp: ENSP00000301972.6:p.Gln693Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1516C>A
  hgvsp: ENSP00000438297.1:p.Gln506Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1851C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10416C>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3800
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln693Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

3-40275523-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275523
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275523
    reference: chr 3
allele count: 1
allele frequency: 8.28953694646617e-6
allele num: 120634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2079G>C
  hgvsp: ENSP00000398665.1:p.Gln693His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1812G>C
  hgvsp: ENSP00000379519.3:p.Gln604His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2079G>C
  hgvsp: ENSP00000301972.6:p.Gln693His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1518G>C
  hgvsp: ENSP00000438297.1:p.Gln506His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*128G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10414G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1853G>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1594G>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3795
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln693His
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

3-40275529-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275529
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275529
    reference: chr 3
allele count: 1
allele frequency: 8.316423272678886e-6
allele num: 120244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1859T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2085T>G
  hgvsp: ENST00000302541.6:c.2085T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1524T>G
  hgvsp: ENST00000539167.1:c.1524T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1818T>G
  hgvsp: ENST00000396217.3:c.1818T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1600T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*134T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2085T>G
  hgvsp: ENST00000444716.1:c.2085T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10408T>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9702
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr695Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

3-40275531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275531
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275531
    reference: chr 3
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1526C>T
  hgvsp: ENSP00000438297.1:p.Ser509Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*136C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10406C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1820C>T
  hgvsp: ENSP00000379519.3:p.Ser607Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2087C>T
  hgvsp: ENSP00000398665.1:p.Ser696Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2087C>T
  hgvsp: ENSP00000301972.6:p.Ser696Phe
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1861C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1602C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13621
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34945
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser696Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

3-40275552-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275552
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275552
    reference: chr 3
allele count: 6
allele frequency: 5.080440304826418e-5
allele num: 118100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+8G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10385G>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26116
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
hgvs: c.2100+8G>T
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS

3-40275555-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275555
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275555
    reference: chr 3
allele count: 5
allele frequency: 4.240306658977577e-5
allele num: 117916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+11A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+11A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+11A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+11A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+11A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+11A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10382A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+11A>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25853
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12610
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/3-40275565-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275565
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275565
    reference: chr 3
allele count: 2
allele frequency: 1.716207867096863e-5
allele num: 116536
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+21C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10372C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+21C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+21C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+21C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+21C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+21C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+21C>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

3-40275565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275565
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275565
    reference: chr 3
allele count: 6
allele frequency: 5.148623601290588e-5
allele num: 116536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10372C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+21C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23372
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8091
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5108
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

3-40275567-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275567
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275567
    reference: chr 3
allele count: 2
allele frequency: 1.720489307158956e-5
allele num: 116246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+23T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+23T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+23T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+23T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+23T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+23T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10370T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+23T>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22472
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11265
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

3-40275586-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275586
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275586
    reference: chr 3
allele count: 1
allele frequency: 8.823321804192843e-6
allele num: 113336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+42T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10351T>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2689
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5080
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2683
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

3-40275591-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275591
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275591
    reference: chr 3
allele count: 1
allele frequency: 8.89901398924999e-6
allele num: 112372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+47A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10346A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+47A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+47A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+47A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+47A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+47A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+47A>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10652
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5959
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3062
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3268
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD

3-40275592-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275592
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275592
    reference: chr 3
allele count: 2
allele frequency: 1.784057660743595e-5
allele num: 112104
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+48A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+48A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+48A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+48A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+48A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+48A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10345A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+48A>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10325
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12576
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9867
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-40275594-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40275594
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40275594
    reference: chr 3
allele count: 6
allele frequency: 5.399179324742639e-5
allele num: 111128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1539+50A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-10343A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1833+50A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*149+50A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2100+50A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1874+50A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2100+50A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1615+50A>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12519
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3332
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5982
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

3-40285887-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285887
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285887
    reference: chr 3
allele count: 1
allele frequency: 8.879259824900996e-6
allele num: 112622
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-50C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-50C>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7349
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5306
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3528
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10826
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

3-40285891-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285891
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285891
    reference: chr 3
allele count: 1
allele frequency: 8.870910510254773e-6
allele num: 112728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-46T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-46T>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18965
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

3-40285894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285894
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285894
    reference: chr 3
allele count: 16
allele frequency: 1.419018394025932e-4
allele num: 112754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-43C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-43C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9949
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3050
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

3-40285899-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285899
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285899
    reference: chr 3
allele count: 1
allele frequency: 8.852847961189115e-6
allele num: 112958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-38C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-38C>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

3-40285913-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285913
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285913
    reference: chr 3
allele count: 1
allele frequency: 8.78394996662099e-6
allele num: 113844
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-24T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-24T>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19077
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5629
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3568
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

3-40285920-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285920
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285920
    reference: chr 3
allele count: 5
allele frequency: 4.373764411553736e-5
allele num: 114318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-17T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-17T>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19092
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

3-40285931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285931
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285931
    reference: chr 3
allele count: 1
allele frequency: 8.632000552448036e-6
allele num: 115848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-6C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-6C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
hgvs: c.2101-6C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

3-40285933-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285933
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285933
    reference: chr 3
allele count: 4
allele frequency: 3.441215437292452e-5
allele num: 116238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1834-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1875-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1906-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*150-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1540-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2101-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2101-4A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1616-4A>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16445
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3614
  bin: 8.25e1
  variant carriers: 0
hgvs: c.2101-4A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

3-40285951-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285951
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285951
    reference: chr 3
allele count: 1
allele frequency: 8.388980235562565e-6
allele num: 119204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1920A>G
  hgvsp: ENST00000425621.1:c.1920A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1848A>G
  hgvsp: ENST00000396217.3:c.1848A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1630A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1889A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2115A>G
  hgvsp: ENST00000444716.1:c.2115A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2115A>G
  hgvsp: ENST00000302541.6:c.2115A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1554A>G
  hgvsp: ENST00000539167.1:c.1554A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*164A>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala705Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-40285954-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285954
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285954
    reference: chr 3
allele count: 1
allele frequency: 8.370722560771445e-6
allele num: 119464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1923C>G
  hgvsp: ENST00000425621.1:c.1923C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1557C>G
  hgvsp: ENST00000539167.1:c.1557C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1633C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1851C>G
  hgvsp: ENST00000396217.3:c.1851C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2118C>G
  hgvsp: ENST00000444716.1:c.2118C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1892C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2118C>G
  hgvsp: ENST00000302541.6:c.2118C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*167C>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17927
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19124
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly706Gly
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

3-40285959-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285959
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285959
    reference: chr 3
allele count: 1
allele frequency: 8.34125752798492e-6
allele num: 119886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1928T>C
  hgvsp: ENSP00000389323.1:p.Val643Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2123T>C
  hgvsp: ENSP00000301972.6:p.Val708Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1638T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*172T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1856T>C
  hgvsp: ENSP00000379519.3:p.Val619Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1897T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1562T>C
  hgvsp: ENSP00000438297.1:p.Val521Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2123T>C
  hgvsp: ENSP00000398665.1:p.Val708Ala
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19129
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val708Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

3-40285983-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285983
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285983
    reference: chr 3
allele count: 1
allele frequency: 8.289262089888757e-6
allele num: 120638
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2147C>T
  hgvsp: ENSP00000398665.1:p.Thr716Ile
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1586C>T
  hgvsp: ENSP00000438297.1:p.Thr529Ile
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2147C>T
  hgvsp: ENSP00000301972.6:p.Thr716Ile
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1952C>T
  hgvsp: ENSP00000389323.1:p.Thr651Ile
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*196C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1921C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1880C>T
  hgvsp: ENSP00000379519.3:p.Thr627Ile
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1662C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr716Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-40285991-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285991
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285991
    reference: chr 3
allele count: 11
allele frequency: 9.11139089523557e-5
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2155G>A
  hgvsp: ENSP00000398665.1:p.Glu719Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2155G>A
  hgvsp: ENSP00000301972.6:p.Glu719Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*204G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1929G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1670G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1888G>A
  hgvsp: ENSP00000379519.3:p.Glu630Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1960G>A
  hgvsp: ENSP00000389323.1:p.Glu654Lys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1594G>A
  hgvsp: ENSP00000438297.1:p.Glu532Lys
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu719Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

3-40285996-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285996
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285996
    reference: chr 3
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1893T>C
  hgvsp: ENST00000396217.3:c.1893T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2160T>C
  hgvsp: ENST00000444716.1:c.2160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*209T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1675T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1599T>C
  hgvsp: ENST00000539167.1:c.1599T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2160T>C
  hgvsp: ENST00000302541.6:c.2160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1965T>C
  hgvsp: ENST00000425621.1:c.1965T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1934T>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17756
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp720Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-40285999-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40285999
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40285999
    reference: chr 3
allele count: 5
allele frequency: 4.140992513085536e-5
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1678C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1602C>T
  hgvsp: ENST00000539167.1:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2163C>T
  hgvsp: ENST00000302541.6:c.2163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2163C>T
  hgvsp: ENST00000444716.1:c.2163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1896C>T
  hgvsp: ENST00000396217.3:c.1896C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1968C>T
  hgvsp: ENST00000425621.1:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*212C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1937C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3830
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala721Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

3-40286003-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286003
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286003
    reference: chr 3
allele count: 8
allele frequency: 6.623942239223673e-5
allele num: 120774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1606C>T
  hgvsp: ENSP00000438297.1:p.Arg536Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2167C>T
  hgvsp: ENSP00000301972.6:p.Arg723Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1682C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*216C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1941C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1972C>T
  hgvsp: ENSP00000389323.1:p.Arg658Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2167C>T
  hgvsp: ENSP00000398665.1:p.Arg723Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1900C>T
  hgvsp: ENSP00000379519.3:p.Arg634Cys
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18015
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg723Cys
num of homozygotes: 2
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

3-40286004-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286004
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286004
    reference: chr 3
allele count: 2
allele frequency: 1.655985559805918e-5
allele num: 120774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2168G>A
  hgvsp: ENSP00000398665.1:p.Arg723His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*217G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1901G>A
  hgvsp: ENSP00000379519.3:p.Arg634His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1683G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1942G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2168G>A
  hgvsp: ENSP00000301972.6:p.Arg723His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1607G>A
  hgvsp: ENSP00000438297.1:p.Arg536His
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1973G>A
  hgvsp: ENSP00000389323.1:p.Arg658His
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg723His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

3-40286014-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286014
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286014
    reference: chr 3
allele count: 2
allele frequency: 1.655272871732905e-5
allele num: 120826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1983C>T
  hgvsp: ENST00000425621.1:c.1983C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2178C>T
  hgvsp: ENST00000444716.1:c.2178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*227C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1617C>T
  hgvsp: ENST00000539167.1:c.1617C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1952C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2178C>T
  hgvsp: ENST00000302541.6:c.2178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1911C>T
  hgvsp: ENST00000396217.3:c.1911C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1693C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17950
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2831
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His726His
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-40286017-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286017
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286017
    reference: chr 3
allele count: 62916
allele frequency: 5.203539823008849e-1
allele num: 120910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1620T>C
  hgvsp: ENST00000539167.1:c.1620T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1955T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1986T>C
  hgvsp: ENST00000425621.1:c.1986T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1696T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2181T>C
  hgvsp: ENST00000444716.1:c.2181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2181T>C
  hgvsp: ENST00000302541.6:c.2181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*230T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1914T>C
  hgvsp: ENST00000396217.3:c.1914T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 3.75e1
  variant carriers: 1772
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 3.25e1
  variant carriers: 1267
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 6.25e1
  variant carriers: 4208
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 8.25e1
  variant carriers: 2822
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 6.75e1
  variant carriers: 4220
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 2.25e1
  variant carriers: 499
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 5.75e1
  variant carriers: 3971
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 9.25e1
  variant carriers: 1615
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 4.75e1
  variant carriers: 3116
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 4.25e1
  variant carriers: 2407
genotype depth: GenotypeDepth
  all individuals: 7924
  bin: 2.75e1
  variant carriers: 747
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 5.25e1
  variant carriers: 3624
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 8.75e1
  variant carriers: 2212
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.75e1
  variant carriers: 3438
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 7.25e1
  variant carriers: 3752
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 345
genotype depth: GenotypeDepth
  all individuals: 5360
  bin: 9.75e1
  variant carriers: 5329
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 9885
  bin: 6.25e1
  variant carriers: 83
hgvs: p.Ser727Ser
num of homozygotes: 17446
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ

3-40286018-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286018
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286018
    reference: chr 3
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1697G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1956G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1915G>T
  hgvsp: ENSP00000379519.3:p.Gly639Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2182G>T
  hgvsp: ENSP00000301972.6:p.Gly728Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2182G>T
  hgvsp: ENSP00000398665.1:p.Gly728Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*231G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1987G>T
  hgvsp: ENSP00000389323.1:p.Gly663Cys
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1621G>T
  hgvsp: ENSP00000438297.1:p.Gly541Cys
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13228
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly728Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

3-40286020-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286020
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286020
    reference: chr 3
allele count: 1
allele frequency: 8.292836647703714e-6
allele num: 120586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1623C>T
  hgvsp: ENST00000539167.1:c.1623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1989C>T
  hgvsp: ENST00000425621.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1917C>T
  hgvsp: ENST00000396217.3:c.1917C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2184C>T
  hgvsp: ENST00000444716.1:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2184C>T
  hgvsp: ENST00000302541.6:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1958C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*233C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1699C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly728Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

3-40286021-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286021
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286021
    reference: chr 3
allele count: 1
allele frequency: 8.294074713025015e-6
allele num: 120568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1959A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1700A>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1990A>T
  hgvsp: ENSP00000389323.1:p.Thr664Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2185A>T
  hgvsp: ENSP00000398665.1:p.Thr729Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2185A>T
  hgvsp: ENSP00000301972.6:p.Thr729Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1624A>T
  hgvsp: ENSP00000438297.1:p.Thr542Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1918A>T
  hgvsp: ENSP00000379519.3:p.Thr640Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*234A>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10891
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr729Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS

3-40286023-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286023
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286023
    reference: chr 3
allele count: 1
allele frequency: 8.29476268683953e-6
allele num: 120558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*236T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2187T>G
  hgvsp: ENST00000302541.6:c.2187T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1920T>G
  hgvsp: ENST00000396217.3:c.1920T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2187T>G
  hgvsp: ENST00000444716.1:c.2187T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1961T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1702T>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1626T>G
  hgvsp: ENST00000539167.1:c.1626T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1992T>G
  hgvsp: ENST00000425621.1:c.1992T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr729Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/3-40286028-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286028
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286028
    reference: chr 3
allele count: 7
allele frequency: 5.810961132971394e-5
allele num: 120462
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2192A>C
  hgvsp: ENSP00000301972.6:p.Glu731Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1966A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2192A>C
  hgvsp: ENSP00000398665.1:p.Glu731Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1631A>C
  hgvsp: ENSP00000438297.1:p.Glu544Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*241A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1997A>C
  hgvsp: ENSP00000389323.1:p.Glu666Ala
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1707A>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1925A>C
  hgvsp: ENSP00000379519.3:p.Glu642Ala
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3096
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu731Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

3-40286029-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286029
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286029
    reference: chr 3
allele count: 4
allele frequency: 3.321266066624597e-5
allele num: 120436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*242G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2193G>A
  hgvsp: ENST00000302541.6:c.2193G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1967G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1998G>A
  hgvsp: ENST00000425621.1:c.1998G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2193G>A
  hgvsp: ENST00000444716.1:c.2193G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1926G>A
  hgvsp: ENST00000396217.3:c.1926G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1632G>A
  hgvsp: ENST00000539167.1:c.1632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1708G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3092
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu731Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

3-40286029-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286029
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286029
    reference: chr 3
allele count: 1
allele frequency: 8.303165166561494e-6
allele num: 120436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*242G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1926G>T
  hgvsp: ENSP00000379519.3:p.Glu642Asp
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1708G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2193G>T
  hgvsp: ENSP00000398665.1:p.Glu731Asp
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2193G>T
  hgvsp: ENSP00000301972.6:p.Glu731Asp
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.1998G>T
  hgvsp: ENSP00000389323.1:p.Glu666Asp
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1967G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1632G>T
  hgvsp: ENSP00000438297.1:p.Glu544Asp
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu731Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

3-40286040-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286040
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286040
    reference: chr 3
allele count: 5
allele frequency: 4.158142474593749e-5
allele num: 120246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1937C>T
  hgvsp: ENSP00000379519.3:p.Ala646Val
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*253C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2204C>T
  hgvsp: ENSP00000301972.6:p.Ala735Val
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1978C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1719C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1643C>T
  hgvsp: ENSP00000438297.1:p.Ala548Val
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2009C>T
  hgvsp: ENSP00000389323.1:p.Ala670Val
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2204C>T
  hgvsp: ENSP00000398665.1:p.Ala735Val
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2992
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala735Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

3-40286041-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286041
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286041
    reference: chr 3
allele count: 5
allele frequency: 4.160356792198499e-5
allele num: 120182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2205G>A
  hgvsp: ENST00000444716.1:c.2205G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1720G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1938G>A
  hgvsp: ENST00000396217.3:c.1938G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1979G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*254G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2205G>A
  hgvsp: ENST00000302541.6:c.2205G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1644G>A
  hgvsp: ENST00000539167.1:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2010G>A
  hgvsp: ENST00000425621.1:c.2010G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala735Ala
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-40286053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286053
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286053
    reference: chr 3
allele count: 15
allele frequency: 1.252107714652999e-4
allele num: 119798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2217C>T
  hgvsp: ENST00000444716.1:c.2217C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1991C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*266C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1950C>T
  hgvsp: ENST00000396217.3:c.1950C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2217C>T
  hgvsp: ENST00000302541.6:c.2217C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1732C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2022C>T
  hgvsp: ENST00000425621.1:c.2022C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1656C>T
  hgvsp: ENST00000539167.1:c.1656C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2951
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp739Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

3-40286059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286059
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286059
    reference: chr 3
allele count: 2
allele frequency: 1.675294432996599e-5
allele num: 119382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1956G>A
  hgvsp: ENST00000396217.3:c.1956G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.1997G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*272G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1662G>A
  hgvsp: ENST00000539167.1:c.1662G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1738G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2223G>A
  hgvsp: ENST00000302541.6:c.2223G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2223G>A
  hgvsp: ENST00000444716.1:c.2223G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2028G>A
  hgvsp: ENST00000425621.1:c.2028G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2916
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val741Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

3-40286064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286064
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286064
    reference: chr 3
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2002C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1961C>T
  hgvsp: ENSP00000379519.3:p.Thr654Met
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*277C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1667C>T
  hgvsp: ENSP00000438297.1:p.Thr556Met
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2033C>T
  hgvsp: ENSP00000389323.1:p.Thr678Met
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2228C>T
  hgvsp: ENSP00000398665.1:p.Thr743Met
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2228C>T
  hgvsp: ENSP00000301972.6:p.Thr743Met
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1743C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr743Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

3-40286065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286065
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286065
    reference: chr 3
allele count: 215
allele frequency: 1.806419089228701e-3
allele num: 119020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1962G>A
  hgvsp: ENST00000396217.3:c.1962G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2229G>A
  hgvsp: ENST00000444716.1:c.2229G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2229G>A
  hgvsp: ENST00000302541.6:c.2229G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*278G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2034G>A
  hgvsp: ENST00000425621.1:c.2034G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1668G>A
  hgvsp: ENST00000539167.1:c.1668G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1744G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2003G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12551
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30007
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 9.75e1
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr743Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

3-40286082-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286082
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286082
    reference: chr 3
allele count: 3
allele frequency: 2.563094851596808e-5
allele num: 117046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2246A>G
  hgvsp: ENSP00000398665.1:p.His749Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2051A>G
  hgvsp: ENSP00000389323.1:p.His684Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2020A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1685A>G
  hgvsp: ENSP00000438297.1:p.His562Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1761A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1979A>G
  hgvsp: ENSP00000379519.3:p.His660Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2246A>G
  hgvsp: ENSP00000301972.6:p.His749Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*295A>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His749Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

3-40286085-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286085
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286085
    reference: chr 3
allele count: 1
allele frequency: 8.554612647139337e-6
allele num: 116896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1688A>G
  hgvsp: ENSP00000438297.1:p.His563Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2249A>G
  hgvsp: ENSP00000398665.1:p.His750Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2023A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2249A>G
  hgvsp: ENSP00000301972.6:p.His750Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*298A>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2054A>G
  hgvsp: ENSP00000389323.1:p.His685Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1982A>G
  hgvsp: ENSP00000379519.3:p.His661Arg
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1764A>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3774
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His750Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

3-40286087-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286087
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286087
    reference: chr 3
allele count: 2
allele frequency: 1.714295510260059e-5
allele num: 116666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1766G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1690G>T
  hgvsp: ENSP00000438297.1:p.Ala564Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2251G>T
  hgvsp: ENSP00000398665.1:p.Ala751Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1984G>T
  hgvsp: ENSP00000379519.3:p.Ala662Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*300G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2056G>T
  hgvsp: ENSP00000389323.1:p.Ala686Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2251G>T
  hgvsp: ENSP00000301972.6:p.Ala751Ser
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2025G>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala751Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

3-40286101-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286101
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286101
    reference: chr 3
allele count: 1
allele frequency: 8.70958751393534e-6
allele num: 114816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+3G>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+3G>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
hgvs: c.2262+3G>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-40286106-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286106
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286106
    reference: chr 3
allele count: 3
allele frequency: 2.637130801687764e-5
allele num: 113760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+8C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+8C>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10794
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30431
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1482
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
hgvs: c.2262+8C>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-40286115-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286115
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286115
    reference: chr 3
allele count: 2
allele frequency: 1.780436563045259e-5
allele num: 112332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+17C>G
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+17C>G
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

3-40286117-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286117
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286117
    reference: chr 3
allele count: 1
allele frequency: 8.94006579888428e-6
allele num: 111856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+19G>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+19G>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22612
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

3-40286119-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286119
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286119
    reference: chr 3
allele count: 14
allele frequency: 1.2593098981758e-4
allele num: 111172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+21C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+21C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21614
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9422
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8850
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2535
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

3-40286120-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286120
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286120
    reference: chr 3
allele count: 1
allele frequency: 9.002196535954774e-6
allele num: 111084
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+22C>T
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+22C>T
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

3-40286124-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286124
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286124
    reference: chr 3
allele count: 1
allele frequency: 9.039629736765981e-6
allele num: 110624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+26T>C
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+26T>C
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20141
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2934
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/3-40286143-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 40286143
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 40286143
    reference: chr 3
allele count: 2
allele frequency: 1.909672491167765e-5
allele num: 104730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000438297
  ensembl transcript: ENST00000539167
  gene symbol: MYRIP
  hgvsc: ENST00000539167.1:c.1701+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000389323
  ensembl transcript: ENST00000425621
  gene symbol: MYRIP
  hgvsc: ENST00000425621.1:c.2067+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000301972
  ensembl transcript: ENST00000302541
  gene symbol: MYRIP
  hgvsc: ENST00000302541.6:c.2262+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000379519
  ensembl transcript: ENST00000396217
  gene symbol: MYRIP
  hgvsc: ENST00000396217.3:c.1995+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000413392
  ensembl transcript: ENST00000458292
  gene symbol: MYRIP
  hgvsc: ENST00000458292.1:c.*311+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl transcript: ENST00000459828
  gene symbol: MYRIP
  hgvsc: ENST00000459828.1:n.2036+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000398665
  ensembl transcript: ENST00000444716
  gene symbol: MYRIP
  hgvsc: ENST00000444716.1:c.2262+45C>A
  variant of: http://identifiers.org/hgnc/19156
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170011
  ensembl protein: ENSP00000400916
  ensembl transcript: ENST00000458441
  gene symbol: MYRIP
  hgvsc: ENST00000458441.1:c.*1777+45C>A
  variant of: http://identifiers.org/hgnc/19156
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10072
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.914e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.547e0

QD
type: SiteQuality
SIO_000300: 1.635e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.264e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.868507e6

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9444
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2944
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6654
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1374
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.993075331994364e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.332e0

DP
type: SiteQuality
SIO_000300: 1.868489e6

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 1.106e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33102
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2937
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6652
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995743022454058e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.489e1

FS
type: SiteQuality
SIO_000300: 4.912e0

MQRankSum
type: SiteQuality
SIO_000300: -2.228e0

QD
type: SiteQuality
SIO_000300: 1.817e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

DP
type: SiteQuality
SIO_000300: 1.868095e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.99e-1

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.797e0

QD
type: SiteQuality
SIO_000300: 1.481e1

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

FS
type: SiteQuality
SIO_000300: 6.012e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.868089e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6643
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1375
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3605
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.742e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

DP
type: SiteQuality
SIO_000300: 1.867953e6

QD
type: SiteQuality
SIO_000300: 1.163e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.142e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

GenotypeQuality
all individuals: 2774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 765
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8620
bin: 9.75e1
variant carriers: 5170

GenotypeQuality
all individuals: 1994
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 157
allele frequency: 2.37590799031477e-2
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 302
allele frequency: 2.610650069156293e-2
allele num: 11568
num of homozygotes: 3

South Asian
type: Population
allele count: 888
allele frequency: 5.378558449424591e-2
allele num: 16510
num of homozygotes: 42

Other
type: Population
allele count: 28
allele frequency: 3.104212860310421e-2
allele num: 902
num of homozygotes: 1

African
type: Population
allele count: 947
allele frequency: 9.104018457988848e-2
allele num: 10402
num of homozygotes: 48

European (Non-Finnish)
type: Population
allele count: 2723
allele frequency: 4.082336361728284e-2
allele num: 66702
num of homozygotes: 60

East Asian
type: Population
allele count: 289
allele frequency: 3.348783314020858e-2
allele num: 8630
num of homozygotes: 2

DP
type: SiteQuality
SIO_000300: 2.001753e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.857e0

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35843
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.996821684507211e-5
allele num: 66702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

FS
type: SiteQuality
SIO_000300: 1.014e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 1.802036e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

QD
type: SiteQuality
SIO_000300: 1.628e1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35898
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
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MQ
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQ
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 902
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 9.63020030816641e-5
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European (Non-Finnish)
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allele frequency: 1.500375093773443e-5
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East Asian
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European (Finnish)
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allele frequency: 6.055101422948834e-4
allele num: 6606
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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FS
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 11560
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East Asian
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South Asian
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Other
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 1.3986e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66602
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Latino
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South Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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FS
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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South Asian
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European (Non-Finnish)
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allele num: 66568
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Latino
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European (Finnish)
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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Other
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66482
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FS
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MQ
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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South Asian
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QD
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e-1

FS
type: SiteQuality
SIO_000300: 3.815e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e0

DP
type: SiteQuality
SIO_000300: 1.786556e6

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.26e1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508386629660915e-5
allele num: 66296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.77689e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -4.024e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

QD
type: SiteQuality
SIO_000300: 1.011e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

FS
type: SiteQuality
SIO_000300: 2.551e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3783
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variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.289308176100629e-5
allele num: 15900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

DP
type: SiteQuality
SIO_000300: 1.774021e6

MQRankSum
type: SiteQuality
SIO_000300: -2.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.718e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

QD
type: SiteQuality
SIO_000300: 1.423e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14776
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.933698415802855e-4
allele num: 10226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.571219601389651e-5
allele num: 65628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

DP
type: SiteQuality
SIO_000300: 1.714164e6

QD
type: SiteQuality
SIO_000300: 1.234e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.481e0

GenotypeQuality
all individuals: 2668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 149
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GenotypeQuality
all individuals: 367
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524855138761818e-5
allele num: 65580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.728140772063838e-4
allele num: 14662
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

FS
type: SiteQuality
SIO_000300: 3.727e0

DP
type: SiteQuality
SIO_000300: 1.706925e6

GenotypeQuality
all individuals: 3749
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
all individuals: 8091
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.075125311356438e-5
allele num: 65038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

DP
type: SiteQuality
SIO_000300: 1.642163e6

QD
type: SiteQuality
SIO_000300: 1.362e1

VQSLOD
type: SiteQuality
SIO_000300: 9.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.560239248077471e-4
allele num: 14044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537562655678219e-5
allele num: 65038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.28e-1

DP
type: SiteQuality
SIO_000300: 1.642163e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539408866995074e-5
allele num: 64960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.832361773538245e-5
allele num: 11322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.492e-1

DP
type: SiteQuality
SIO_000300: 1.615893e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.031e0

QD
type: SiteQuality
SIO_000300: 1.137e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2511
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.054123711340206e-5
allele num: 12416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 830
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.585e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.002e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 5.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573069057731634e-5
allele num: 63570
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.404069e6

MQRankSum
type: SiteQuality
SIO_000300: -6.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11134
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.010858636637844e-4
allele num: 9946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63458
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.686e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 1.400649e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.522902580706599e-5
allele num: 63006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

FS
type: SiteQuality
SIO_000300: 1.025e0

QD
type: SiteQuality
SIO_000300: 1.749e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.391276e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562158277876714e-5
allele num: 64014
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.485e1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.957617e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3039
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GenotypeQuality
all individuals: 662
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.936406995230525e-5
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.026e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: -8.18e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.27e-1

QD
type: SiteQuality
SIO_000300: 1.558e1

DP
type: SiteQuality
SIO_000300: 1.962724e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18996
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 469
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.875293014533521e-3
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.968195e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

QD
type: SiteQuality
SIO_000300: 1.27e1

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171508903467666e-4
allele num: 8536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.975711e6

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.734e1

MQRankSum
type: SiteQuality
SIO_000300: -1.065e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

FS
type: SiteQuality
SIO_000300: 3.089e0

VQSLOD
type: SiteQuality
SIO_000300: -4.587e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169590643274854e-4
allele num: 8550
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 832
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.995151e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
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allele frequency: 2.959747434885557e-4
allele num: 10136
num of homozygotes: 0

East Asian
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allele frequency: 1.168497312456181e-4
allele num: 8558
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South Asian
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allele frequency: 0.0e0
allele num: 12204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64520
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Latino
type: Population
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allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
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Other
type: Population
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.898e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.142e0

DP
type: SiteQuality
SIO_000300: 2.003703e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19097
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variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
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allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64934
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.798e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: -9.78e-2

InbreedingCoeff
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SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.266e0

QD
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SIO_000300: 1.056e1

DP
type: SiteQuality
SIO_000300: 2.021987e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65028
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.916960438699569e-4
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

VQSLOD
type: SiteQuality
SIO_000300: -1.222e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.8032e1

DP
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SIO_000300: 2.026424e6

ClippingRankSum
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.929e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65830
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.463288521199587e-5
allele num: 15472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.819e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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FS
type: SiteQuality
SIO_000300: 6.593e0

InbreedingCoeff
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SIO_000300: 6.0e-3

ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 2.060308e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15636
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65916
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.587e0

DP
type: SiteQuality
SIO_000300: 2.064012e6

MQRankSum
type: SiteQuality
SIO_000300: 9.51e-1

VQSLOD
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

InbreedingCoeff
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SIO_000300: 6.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.513e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15922
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.838e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.081e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508568670045861e-5
allele num: 66288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.72e-2

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.078705e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.658124811576726e-4
allele num: 66340
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
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South Asian
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African
type: Population
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.507295309296997e-5
allele num: 66344
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East Asian
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DP
type: SiteQuality
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FS
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MQRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01504507492387e-5
allele num: 66334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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Latino
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allele frequency: 2.600104004160167e-4
allele num: 11538
num of homozygotes: 0

South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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African
type: Population
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Other
type: Population
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3966
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
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GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3843
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 5
allele frequency: 5.580357142857143e-3
allele num: 896
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014227152158187e-5
allele num: 66352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.630000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.67e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.083273e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.305e0

FS
type: SiteQuality
SIO_000300: 3.222e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

GenotypeQuality
all individuals: 142
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19219
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.25e1
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GenotypeQuality
all individuals: 2134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3966
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6262
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 2.083726e6

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

QD
type: SiteQuality
SIO_000300: 1.055e1

FS
type: SiteQuality
SIO_000300: 4.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.785e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
all individuals: 121
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GenotypeQuality
all individuals: 3869
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3994
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
all individuals: 3208
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variant carriers: 0

GenotypeQuality
all individuals: 19237
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013046491307361e-5
allele num: 66378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

FS
type: SiteQuality
SIO_000300: 5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 2.085382e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.864e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.297e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

GenotypeQuality
all individuals: 2634
bin: 6.75e1
variant carriers: 100

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 19

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 61

GenotypeQuality
all individuals: 701
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variant carriers: 56

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 30

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 44864
bin: 9.75e1
variant carriers: 44405

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 63

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 48

GenotypeQuality
all individuals: 177
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 781
bin: 7.75e1
variant carriers: 134

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 91

GenotypeQuality
all individuals: 443
bin: 8.25e1
variant carriers: 126

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 202

East Asian
type: Population
allele count: 6508
allele frequency: 7.551636110466465e-1
allele num: 8618
num of homozygotes: 2450

South Asian
type: Population
allele count: 10806
allele frequency: 6.552267766189668e-1
allele num: 16492
num of homozygotes: 3587

African
type: Population
allele count: 7753
allele frequency: 7.489374034003091e-1
allele num: 10352
num of homozygotes: 2904

European (Non-Finnish)
type: Population
allele count: 29176
allele frequency: 4.392652815417043e-1
allele num: 66420
num of homozygotes: 6477

Latino
type: Population
allele count: 5427
allele frequency: 4.706035379812695e-1
allele num: 11532
num of homozygotes: 1304

European (Finnish)
type: Population
allele count: 2760
allele frequency: 4.188163884673748e-1
allele num: 6590
num of homozygotes: 587

Other
type: Population
allele count: 486
allele frequency: 5.364238410596026e-1
allele num: 906
num of homozygotes: 137

BaseQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.99e-2

QD
type: SiteQuality
SIO_000300: 2.21e1

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

DP
type: SiteQuality
SIO_000300: 3.522379e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 589
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variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 3053
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variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 38010
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variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509707418702255e-5
allele num: 66238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.887e0

VQSLOD
type: SiteQuality
SIO_000300: -2.251e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 2.715e1

FS
type: SiteQuality
SIO_000300: 3.067e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

DP
type: SiteQuality
SIO_000300: 1.722988e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3053
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 578
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variant carriers: 0

GenotypeQuality
all individuals: 10897
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variant carriers: 0

GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 1927
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variant carriers: 1

GenotypeQuality
all individuals: 484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070908207867897e-5
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.178e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.722142e6

VQSLOD
type: SiteQuality
SIO_000300: -2.59e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

QD
type: SiteQuality
SIO_000300: 8.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

GenotypeQuality
all individuals: 105
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50993537476596e-5
allele num: 66228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

QD
type: SiteQuality
SIO_000300: 2.194e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: -2.175e0

DP
type: SiteQuality
SIO_000300: 1.721607e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

FS
type: SiteQuality
SIO_000300: 9.62e-1

GenotypeQuality
all individuals: 3045
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1926
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variant carriers: 1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 604
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GenotypeQuality
all individuals: 1430
bin: 8.25e1
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 94
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GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510026576467746e-5
allele num: 66224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.638e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

DP
type: SiteQuality
SIO_000300: 1.721271e6

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10883
bin: 6.75e1
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GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 73
bin: 5.25e1
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GenotypeQuality
all individuals: 119
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GenotypeQuality
all individuals: 574
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GenotypeQuality
all individuals: 1421
bin: 8.25e1
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GenotypeQuality
all individuals: 38038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1918
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.057881215052138e-4
allele num: 66170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

QD
type: SiteQuality
SIO_000300: 1.011e1

FS
type: SiteQuality
SIO_000300: 6.157e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.584e0

DP
type: SiteQuality
SIO_000300: 1.719626e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.430724355858046e-4
allele num: 16456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 2.497e0

DP
type: SiteQuality
SIO_000300: 1.718611e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.139e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.503e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511578692786746e-5
allele num: 66156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.718611e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 2.497e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.503e0

QD
type: SiteQuality
SIO_000300: 1.139e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.332089552238806e-4
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.541738577527478e-5
allele num: 66054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 1.714047e6

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.09e-1

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1871
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.572774361615121e-5
allele num: 66026
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

VQSLOD
type: SiteQuality
SIO_000300: -9.325e-1

FS
type: SiteQuality
SIO_000300: 7.643e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 2.433e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.452e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 1.712259e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
all individuals: 464
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GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.749475157452764e-3
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.702858e6

QD
type: SiteQuality
SIO_000300: 1.005e1

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 6.408e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65708
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.333722287047841e-4
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.827e0

DP
type: SiteQuality
SIO_000300: 1.693165e6

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 9.0e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.685094e6

FS
type: SiteQuality
SIO_000300: 9.164999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.293577981651376e-3
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 41
allele frequency: 6.376360808709175e-3
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 172
allele frequency: 2.622670854807722e-3
allele num: 65582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15980
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

DP
type: SiteQuality
SIO_000300: 1.687239e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 69
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.62092973106189e-5
allele num: 64922
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 5.836e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.632059e6

MQRankSum
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SIO_000300: 2.4e-2

BaseQRankSum
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SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.541972491210757e-5
allele num: 64852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9976
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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MQ
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6270
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.089184764140744e-5
allele num: 64742
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64018
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.857395925597875e-5
allele num: 11290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.2e-3

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.381e0

FS
type: SiteQuality
SIO_000300: 1.756e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.65e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.717277816214856e-5
allele num: 63596
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9692
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.482e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6092
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.178336458697518e-5
allele num: 62926
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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FS
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MQ
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VQSLOD
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MQRankSum
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DP
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SIO_000300: 1.490401e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

Latino
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allele frequency: 8.97021887334051e-5
allele num: 11148
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
type: Population
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num of homozygotes: 0

MQ
type: SiteQuality
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Finnish)
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African
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Latino
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allele frequency: 1.26012601260126e-3
allele num: 11110
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele frequency: 1.602050624799744e-5
allele num: 62420
num of homozygotes: 0

African
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Other
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FS
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7833
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9597
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.063603488619443e-4
allele num: 9402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11054
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.464e0

DP
type: SiteQuality
SIO_000300: 1.398866e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.313e1