6-133070802-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070802
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070802
    reference: chr 6
allele count: 1
allele frequency: 9.720062208398133e-6
allele num: 102880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+32T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+32T>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

6-133070818-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070818
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070818
    reference: chr 6
allele count: 1
allele frequency: 9.16338312104829e-6
allele num: 109130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+16T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+16T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

6-133070819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070819
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070819
    reference: chr 6
allele count: 22
allele frequency: 2.005286664843679e-4
allele num: 109710
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+15A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+15A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36825
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8179
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5976
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

6-133070821-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070821
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070823
    reference: chr 6
allele count: 1
allele frequency: 9.004141905276426e-6
allele num: 111060
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+12_*155+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+12_*494+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+12_*499+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+12_1371+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+12_*494+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+12_708+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+12_1212+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+12_*625+13insAA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+12_*263+13insAA
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5282
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

6-133070823-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070823
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070822
    reference: chr 6
allele count: 1
allele frequency: 8.912179384346648e-6
allele num: 112206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+10delC
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+10delC
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: AG
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-133070824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070824
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070824
    reference: chr 6
allele count: 1
allele frequency: 8.874216850362955e-6
allele num: 112686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+10C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+10C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

6-133070826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070826
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070826
    reference: chr 6
allele count: 1
allele frequency: 8.80312687066446e-6
allele num: 113596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+8G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+8G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39949
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1371+8G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

6-133070827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070827
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070827
    reference: chr 6
allele count: 4
allele frequency: 3.506372832623293e-5
allele num: 114078
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+7G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+7G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1371+7G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

6-133070829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070829
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070829
    reference: chr 6
allele count: 1
allele frequency: 8.694291328313829e-6
allele num: 115018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*499+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1371+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*625+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*494+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1212+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.708+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*155+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*494+5G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*263+5G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1371+5G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-133070853-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070853
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070853
    reference: chr 6
allele count: 4
allele frequency: 3.336781340718742e-5
allele num: 119876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*606T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1352T>C
  hgvsp: ENSP00000322276.6:p.Leu451Pro
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*475T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*244T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*136T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*480T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.689T>C
  hgvsp: ENSP00000436935.1:p.Leu230Pro
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*475T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1193T>C
  hgvsp: ENSP00000436822.1:p.Leu398Pro
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10520
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6830
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu451Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-133070855-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070855
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070855
    reference: chr 6
allele count: 1
allele frequency: 8.332222370350619e-6
allele num: 120016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1191T>C
  hgvsp: ENST00000525270.1:c.1191T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*242T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.687T>C
  hgvsp: ENST00000525289.1:c.687T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*604T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*473T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*134T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1350T>C
  hgvsp: ENST00000326499.6:c.1350T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*473T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*478T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3034
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His450His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

6-133070864-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070864
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070864
    reference: chr 6
allele count: 3
allele frequency: 2.491694352159469e-5
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1182C>T
  hgvsp: ENST00000525270.1:c.1182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.678C>T
  hgvsp: ENST00000525289.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*595C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*233C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*464C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*469C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1341C>T
  hgvsp: ENST00000326499.6:c.1341C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*464C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*125C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr447Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

6-133070892-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070892
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070892
    reference: chr 6
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*97A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1154A>G
  hgvsp: ENSP00000436822.1:p.Glu385Gly
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*436A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1313A>G
  hgvsp: ENSP00000322276.6:p.Glu438Gly
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*543A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*567A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.650A>G
  hgvsp: ENSP00000436935.1:p.Glu217Gly
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*436A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*441A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*205A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41380
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu438Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

6-133070893-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070893
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070893
    reference: chr 6
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1153G>C
  hgvsp: ENSP00000436822.1:p.Glu385Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*440G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*96G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*566G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.649G>C
  hgvsp: ENSP00000436935.1:p.Glu217Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1312G>C
  hgvsp: ENSP00000322276.6:p.Glu438Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*204G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*435G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*542G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*435G>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu438Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

6-133070899-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070899
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070899
    reference: chr 6
allele count: 3
allele frequency: 2.479543763947434e-5
allele num: 120990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*90G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1306G>C
  hgvsp: ENSP00000322276.6:p.Gly436Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*198G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.643G>C
  hgvsp: ENSP00000436935.1:p.Gly215Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1147G>C
  hgvsp: ENSP00000436822.1:p.Gly383Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*434G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*429G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*536G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*429G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*560G>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly436Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-133070907-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070907
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070907
    reference: chr 6
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*426G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1298G>C
  hgvsp: ENSP00000322276.6:p.Gly433Ala
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*421G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.635G>C
  hgvsp: ENSP00000436935.1:p.Gly212Ala
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*552G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*190G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*82G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*421G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*528G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1139G>C
  hgvsp: ENSP00000436822.1:p.Gly380Ala
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40396
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly433Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/6-133070908-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070908
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070908
    reference: chr 6
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1297G>T
  hgvsp: ENSP00000322276.6:p.Gly433Cys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.634G>T
  hgvsp: ENSP00000436935.1:p.Gly212Cys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*420G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*189G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*425G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*420G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*551G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*527G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1138G>T
  hgvsp: ENSP00000436822.1:p.Gly380Cys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*81G>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly433Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

6-133070911-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070911
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070911
    reference: chr 6
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1294A>C
  hgvsp: ENSP00000322276.6:p.Ser432Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*417A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*186A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*417A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*524A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1135A>C
  hgvsp: ENSP00000436822.1:p.Ser379Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.631A>C
  hgvsp: ENSP00000436935.1:p.Ser211Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*78A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*422A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*548A>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser432Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-133070923-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070923
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070923
    reference: chr 6
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*174A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*512A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*66A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*405A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*405A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*410A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.619A>G
  hgvsp: ENSP00000436935.1:p.Met207Val
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1123A>G
  hgvsp: ENSP00000436822.1:p.Met375Val
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1282A>G
  hgvsp: ENSP00000322276.6:p.Met428Val
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*536A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met428Val
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

6-133070924-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070924
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070924
    reference: chr 6
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.618A>G
  hgvsp: ENST00000525289.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*404A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*409A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*65A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*173A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1281A>G
  hgvsp: ENST00000326499.6:c.1281A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1122A>G
  hgvsp: ENST00000525270.1:c.1122A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*535A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*511A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*404A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3293
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu427Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/6-133070928-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070928
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070928
    reference: chr 6
allele count: 10
allele frequency: 8.254502831294471e-5
allele num: 121146
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1277T>G
  hgvsp: ENSP00000322276.6:p.Phe426Cys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.614T>G
  hgvsp: ENSP00000436935.1:p.Phe205Cys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*507T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*400T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*169T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*61T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*405T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1118T>G
  hgvsp: ENSP00000436822.1:p.Phe373Cys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*400T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*531T>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11527
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe426Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

6-133070931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070931
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070931
    reference: chr 6
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*402G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*166G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1115G>A
  hgvsp: ENSP00000436822.1:p.Arg372Lys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*528G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*397G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1274G>A
  hgvsp: ENSP00000322276.6:p.Arg425Lys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*397G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.611G>A
  hgvsp: ENSP00000436935.1:p.Arg204Lys
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*58G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*504G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg425Lys
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

6-133070935-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070935
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070935
    reference: chr 6
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.607A>G
  hgvsp: ENSP00000436935.1:p.Thr203Ala
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*393A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*162A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*393A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*500A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*524A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*398A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1111A>G
  hgvsp: ENSP00000436822.1:p.Thr371Ala
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1270A>G
  hgvsp: ENSP00000322276.6:p.Thr424Ala
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*54A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr424Ala
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-133070941-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070941
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070941
    reference: chr 6
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*518G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*156G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1105G>T
  hgvsp: ENSP00000436822.1:p.Ala369Ser
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*494G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*392G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*387G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.601G>T
  hgvsp: ENSP00000436935.1:p.Ala201Ser
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1264G>T
  hgvsp: ENSP00000322276.6:p.Ala422Ser
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*48G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*387G>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala422Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

6-133070950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070950
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070950
    reference: chr 6
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*509G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*378G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*383G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*39G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*378G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*147G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1096G>A
  hgvsp: ENSP00000436822.1:p.Val366Ile
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*485G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1255G>A
  hgvsp: ENSP00000322276.6:p.Val419Ile
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.592G>A
  hgvsp: ENSP00000436935.1:p.Val198Ile
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val419Ile
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

6-133070955-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070955
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070955
    reference: chr 6
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*142G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*504G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.587G>A
  hgvsp: ENSP00000436935.1:p.Arg196Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1250G>A
  hgvsp: ENSP00000322276.6:p.Arg417Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1091G>A
  hgvsp: ENSP00000436822.1:p.Arg364Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*378G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*373G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*480G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*373G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg417Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

6-133070956-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070956
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070956
    reference: chr 6
allele count: 12
allele frequency: 9.89853996535511e-5
allele num: 121230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*479C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*372C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*503C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*141C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.586C>T
  hgvsp: ENSP00000436935.1:p.Arg196Trp
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*377C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1090C>T
  hgvsp: ENSP00000436822.1:p.Arg364Trp
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1249C>T
  hgvsp: ENSP00000322276.6:p.Arg417Trp
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*33C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*372C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg417Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

6-133070971-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070971
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070971
    reference: chr 6
allele count: 6
allele frequency: 4.948943400583975e-5
allele num: 121238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*18T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*362T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1075T>C
  hgvsp: ENST00000525270.1:c.1075T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1234T>C
  hgvsp: ENST00000326499.6:c.1234T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.571T>C
  hgvsp: ENST00000525289.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*488T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*464T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*357T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*357T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*126T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu412Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

6-133070971-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070971
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070971
    reference: chr 6
allele count: 3
allele frequency: 2.474471700291988e-5
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1234T>A
  hgvsp: ENSP00000322276.6:p.Leu412Met
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*126T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*18T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*362T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*357T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.571T>A
  hgvsp: ENSP00000436935.1:p.Leu191Met
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*464T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1075T>A
  hgvsp: ENSP00000436822.1:p.Leu359Met
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*488T>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*357T>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu412Met
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

6-133070973-TTAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070973
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070970
    reference: chr 6
allele count: 9
allele frequency: 7.423415100875964e-5
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*352_*354delCTA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*357_*359delCTA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.566_568delCTA
  hgvsp: ENSP00000436935.1:p.Thr189del
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1070_1072delCTA
  hgvsp: ENSP00000436822.1:p.Thr357del
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*13_*15delCTA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1229_1231delCTA
  hgvsp: ENSP00000322276.6:p.Thr410del
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*483_*485delCTA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*459_*461delCTA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*121_*123delCTA
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*352_*354delCTA
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11640
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr410del
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: TTAG
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

6-133070978-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070978
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070978
    reference: chr 6
allele count: 5
allele frequency: 4.124187535055594e-5
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*350T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*355T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1068T>C
  hgvsp: ENST00000525270.1:c.1068T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.564T>C
  hgvsp: ENST00000525289.1:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1227T>C
  hgvsp: ENST00000326499.6:c.1227T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*11T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*119T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*350T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*457T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*481T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr409Thr
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

6-133070983-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070983
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070983
    reference: chr 6
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1222A>C
  hgvsp: ENSP00000322276.6:p.Lys408Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*476A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1063A>C
  hgvsp: ENSP00000436822.1:p.Lys355Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*6A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*345A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*114A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*452A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.559A>C
  hgvsp: ENSP00000436935.1:p.Lys187Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*345A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*350A>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys408Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

6-133070985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070985
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070985
    reference: chr 6
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.557G>A
  hgvsp: ENSP00000436935.1:p.Cys186Tyr
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1220G>A
  hgvsp: ENSP00000322276.6:p.Cys407Tyr
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1061G>A
  hgvsp: ENSP00000436822.1:p.Cys354Tyr
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*343G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*112G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*450G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*474G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*348G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*343G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*4G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys407Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

6-133070987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070987
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070987
    reference: chr 6
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1059G>A
  hgvsp: ENST00000525270.1:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.555G>A
  hgvsp: ENST00000525289.1:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*472G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*346G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*341G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*448G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*341G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*110G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1218G>A
  hgvsp: ENST00000326499.6:c.1218G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.*2G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys406Lys
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-133070992-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070992
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070992
    reference: chr 6
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*336C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1054C>T
  hgvsp: ENST00000525270.1:c.1054C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*105C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*341C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1213C>T
  hgvsp: ENST00000326499.6:c.1213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.357C>T
  hgvsp: ENST00000528801.1:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*467C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.550C>T
  hgvsp: ENST00000525289.1:c.550C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*443C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*336C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu405Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/6-133070994-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070994
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070994
    reference: chr 6
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1211T>G
  hgvsp: ENSP00000322276.6:p.Leu404Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*103T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1052T>G
  hgvsp: ENSP00000436822.1:p.Leu351Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.548T>G
  hgvsp: ENSP00000436935.1:p.Leu183Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*339T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*334T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*465T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*441T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.355T>G
  hgvsp: ENSP00000433285.1:p.Cys119Gly
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*334T>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu404Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

6-133070995-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070995
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070995
    reference: chr 6
allele count: 121255
allele frequency: 9.997114354027538e-1
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.547C>A
  hgvsp: ENSP00000436935.1:p.Leu183Met
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*464C>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*333C>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*333C>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*338C>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1051C>A
  hgvsp: ENSP00000436822.1:p.Leu351Met
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*440C>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*102C>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1210C>A
  hgvsp: ENSP00000322276.6:p.Leu404Met
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.354C>A
  hgvsp: ENSP00000433285.1:p.His118Gln
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 7.75e1
  variant carriers: 2394
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 419
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 9.75e1
  variant carriers: 5357
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 2.75e1
  variant carriers: 2419
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 3.75e1
  variant carriers: 5005
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 942
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 4.75e1
  variant carriers: 6213
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.25e1
  variant carriers: 1127
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 6.75e1
  variant carriers: 4261
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 6.25e1
  variant carriers: 5056
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 4.25e1
  variant carriers: 5607
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 5.25e1
  variant carriers: 6095
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 5.75e1
  variant carriers: 5585
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 7.25e1
  variant carriers: 3230
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 8.25e1
  variant carriers: 1765
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 3.25e1
  variant carriers: 3747
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 8.75e1
  variant carriers: 1296
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 7.75e1
  variant carriers: 816
hgvs: p.Leu404Met
num of homozygotes: 60610
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

6-133070998-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133070998
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133070998
    reference: chr 6
allele count: 1
allele frequency: 8.286102548805144e-6
allele num: 120684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.351A>C
  hgvsp: ENST00000528801.1:c.351A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*330A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1207A>C
  hgvsp: ENSP00000322276.6:p.Thr403Pro
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*330A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*335A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.544A>C
  hgvsp: ENSP00000436935.1:p.Thr182Pro
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1048A>C
  hgvsp: ENSP00000436822.1:p.Thr350Pro
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*461A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*99A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*437A>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr403Pro
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-133071000-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071000
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071000
    reference: chr 6
allele count: 7
allele frequency: 5.801617822569951e-5
allele num: 120656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.349G>T
  hgvsp: ENSP00000433285.1:p.Ala117Ser
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*333G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1205G>T
  hgvsp: ENSP00000322276.6:p.Cys402Phe
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*459G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*328G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*328G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1046G>T
  hgvsp: ENSP00000436822.1:p.Cys349Phe
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.542G>T
  hgvsp: ENSP00000436935.1:p.Cys181Phe
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*97G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*435G>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13154
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys402Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

6-133071005-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071005
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071005
    reference: chr 6
allele count: 1
allele frequency: 8.303165166561494e-6
allele num: 120436
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-1G>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-1G>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1201-1G>C
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

6-133071019-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071019
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071019
    reference: chr 6
allele count: 7
allele frequency: 5.841998965131612e-5
allele num: 119822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-15G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-15G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/6-133071019-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071019
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071019
    reference: chr 6
allele count: 1
allele frequency: 8.345712807330875e-6
allele num: 119822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-15G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-15G>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

6-133071020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071020
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071020
    reference: chr 6
allele count: 1
allele frequency: 8.347942232239753e-6
allele num: 119790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-16C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-16C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23441
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/6-133071024-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071024
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071024
    reference: chr 6
allele count: 1
allele frequency: 8.367220576668843e-6
allele num: 119514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-20T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-20T>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

6-133071025-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071025
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071025
    reference: chr 6
allele count: 1
allele frequency: 8.368761088608442e-6
allele num: 119492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-21A>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-21A>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-133071026-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071026
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071026
    reference: chr 6
allele count: 2
allele frequency: 1.673640167364017e-5
allele num: 119500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-22T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-22T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11628
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

6-133071030-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071030
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071030
    reference: chr 6
allele count: 12
allele frequency: 1.006221804826511e-4
allele num: 119258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-26G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-26G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7439
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11334
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

6-133071031-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071031
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071031
    reference: chr 6
allele count: 2
allele frequency: 1.677655308940225e-5
allele num: 119214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-27C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-27C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7203
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

6-133071032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071032
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071032
    reference: chr 6
allele count: 1
allele frequency: 8.395318770253707e-6
allele num: 119114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-28G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-28G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22805
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/6-133071033-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071033
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071033
    reference: chr 6
allele count: 3
allele frequency: 2.516947446137325e-5
allele num: 119192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-29T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-29T>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19561
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-133071034-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071034
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071034
    reference: chr 6
allele count: 3
allele frequency: 2.517369851978653e-5
allele num: 119172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-30T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-30T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19246
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3719
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-133071042-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071042
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071042
    reference: chr 6
allele count: 1
allele frequency: 8.430139434506248e-6
allele num: 118622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-38G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-38G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

6-133071044-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133071044
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133071044
    reference: chr 6
allele count: 2
allele frequency: 1.686369078736572e-5
allele num: 118598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*324-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*93-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*431-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*455-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*329-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1201-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*324-40A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1042-40A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7468
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

6-133072234-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072234
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072234
    reference: chr 6
allele count: 1
allele frequency: 8.947104716913606e-6
allele num: 111768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1230G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1230G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454+50G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92+50G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-133072246-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072246
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072246
    reference: chr 6
allele count: 1
allele frequency: 8.935113207884344e-6
allele num: 111918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1242G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430+38G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1242G>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

6-133072252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072252
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072252
    reference: chr 6
allele count: 2
allele frequency: 1.782690079329709e-5
allele num: 112190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1248G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041+32G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1248G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323+32G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/6-133072260-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072260
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072260
    reference: chr 6
allele count: 12
allele frequency: 1.065719360568384e-4
allele num: 112600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1256G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323+24G>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1256G>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

6-133072260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072260
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072260
    reference: chr 6
allele count: 2
allele frequency: 1.776198934280639e-5
allele num: 112600
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1256G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1256G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454+24G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323+24G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-133072282-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072282
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072282
    reference: chr 6
allele count: 2
allele frequency: 1.746541847142657e-5
allele num: 114512
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1278T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1278T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323+2T>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92+2T>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1200+2T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

6-133072284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072284
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072284
    reference: chr 6
allele count: 3
allele frequency: 2.610557092883621e-5
allele num: 114918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*430G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*328G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1280G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*92G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1200G>A
  hgvsp: ENST00000326499.6:c.1200G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*454G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*323G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*323G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1280G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1041G>A
  hgvsp: ENST00000525270.1:c.1041G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: c.1200G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-133072288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072288
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072288
    reference: chr 6
allele count: 1
allele frequency: 8.638562543192813e-6
allele num: 115760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1037G>A
  hgvsp: ENSP00000436822.1:p.Trp346Ter
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*426G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*324G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1284G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1196G>A
  hgvsp: ENSP00000322276.6:p.Trp399Ter
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*319G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*88G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*450G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1284G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*319G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp399Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

6-133072301-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072301
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072301
    reference: chr 6
allele count: 3
allele frequency: 2.544011397171059e-5
allele num: 117924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*311A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1183A>G
  hgvsp: ENSP00000322276.6:p.Arg395Gly
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*75A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*437A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*413A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1024A>G
  hgvsp: ENSP00000436822.1:p.Arg342Gly
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*306A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1297A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*306A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1297A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg395Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-133072306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072306
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072306
    reference: chr 6
allele count: 265
allele frequency: 2.235381448864595e-3
allele num: 118548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*70G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*301G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*408G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*432G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1178G>A
  hgvsp: ENSP00000322276.6:p.Arg393Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*306G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1302G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1019G>A
  hgvsp: ENSP00000436822.1:p.Arg340Gln
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1302G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*301G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 9.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7960
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7467
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg393Gln
num of homozygotes: 4
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

6-133072307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072307
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072307
    reference: chr 6
allele count: 8
allele frequency: 6.730041221502482e-5
allele num: 118870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1303C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*407C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*431C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1018C>T
  hgvsp: ENSP00000436822.1:p.Arg340Ter
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1303C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*69C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1177C>T
  hgvsp: ENSP00000322276.6:p.Arg393Ter
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*300C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*305C>T
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*300C>T
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4789
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg393Ter
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP

6-133072311-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072311
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072311
    reference: chr 6
allele count: 3
allele frequency: 2.5071872701745e-5
allele num: 119656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*403T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1173T>C
  hgvsp: ENST00000326499.6:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1307T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*296T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*296T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*65T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*301T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1014T>C
  hgvsp: ENST00000525270.1:c.1014T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1307T>C
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*427T>C
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His391His
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

6-133072314-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072314
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072314
    reference: chr 6
allele count: 1
allele frequency: 8.341675008341675e-6
allele num: 119880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1310A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*298A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*424A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*62A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1310A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1011A>G
  hgvsp: ENST00000525270.1:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*400A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1170A>G
  hgvsp: ENST00000326499.6:c.1170A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*293A>G
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*293A>G
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu390Leu
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum

6-133072319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072319
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072319
    reference: chr 6
allele count: 7
allele frequency: 5.822852199374459e-5
allele num: 120216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1315G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.1006G>A
  hgvsp: ENSP00000436822.1:p.Gly336Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*395G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1165G>A
  hgvsp: ENSP00000322276.6:p.Gly389Arg
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*288G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1315G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*57G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*288G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*419G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*293G>A
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly389Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

6-133072328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072328
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072328
    reference: chr 6
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1324G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1156G>A
  hgvsp: ENSP00000322276.6:p.Ala386Thr
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*279G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*386G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*48G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*279G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*410G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*284G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1324G>A
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.997G>A
  hgvsp: ENSP00000436822.1:p.Ala333Thr
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala386Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

6-133072329-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133072329
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133072328
    reference: chr 6
allele count: 1
allele frequency: 8.276364358664525e-6
allele num: 120826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436863
  ensembl transcript: ENST00000525674
  gene symbol: VNN2
  hgvsc: ENST00000525674.1:c.*277delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000322276
  ensembl transcript: ENST00000326499
  gene symbol: VNN2
  hgvsc: ENST00000326499.6:c.1154delG
  hgvsp: ENSP00000322276.6:p.Gly385GlufsTer21
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000387572
  ensembl transcript: ENST00000418593
  gene symbol: VNN2
  hgvsc: ENST00000418593.2:c.*282delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436935
  ensembl transcript: ENST00000525289
  gene symbol: VNN2
  hgvsc: ENST00000525289.1:c.538-1326delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000432516
  ensembl transcript: ENST00000533835
  gene symbol: VNN2
  hgvsc: ENST00000533835.1:c.*384delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000406536
  ensembl transcript: ENST00000422400
  gene symbol: VNN2
  hgvsc: ENST00000422400.2:c.*408delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000433285
  ensembl transcript: ENST00000528801
  gene symbol: VNN2
  hgvsc: ENST00000528801.1:c.345-1326delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000436822
  ensembl transcript: ENST00000525270
  gene symbol: VNN2
  hgvsc: ENST00000525270.1:c.995delG
  hgvsp: ENSP00000436822.1:p.Gly332GlufsTer21
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000376190
  ensembl transcript: ENST00000392389
  gene symbol: VNN2
  hgvsc: ENST00000392389.2:c.*277delG
  variant of: http://identifiers.org/hgnc/12706
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000112303
  ensembl protein: ENSP00000434077
  ensembl transcript: ENST00000532053
  gene symbol: VNN2
  hgvsc: ENST00000532053.1:c.*46delG
  variant of: http://identifiers.org/hgnc/12706
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7549
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly385GlufsTer21
num of homozygotes: 0
reference allele: TC

GenotypeQuality
all individuals: 8971
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5474
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3977
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1380
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57830
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.127e0

QD
type: SiteQuality
SIO_000300: 1.667e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

DP
type: SiteQuality
SIO_000300: 1.171947e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.476e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

GenotypeQuality
all individuals: 6274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1890
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 368
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60864
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.082652134423252e-5
allele num: 11010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.791e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

DP
type: SiteQuality
SIO_000300: 1.32488e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5426
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1794
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 2.071522023549935e-3
allele num: 9172
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.813565469713457e-4
allele num: 11028
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.598784194528876e-5
allele num: 13160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 3.355e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.489e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

DP
type: SiteQuality
SIO_000300: 1.335191e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1373
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5594
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.241619071268935e-4
allele num: 8054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.354763e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

QD
type: SiteQuality
SIO_000300: 6.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2207
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 881
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1869
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37475
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.22334585379948e-5
allele num: 13844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.370066e6

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.317e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.025e0

GenotypeQuality
all individuals: 37631
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1568
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 241
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59877214299418e-5
allele num: 62548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.377266e6

MQ
type: SiteQuality
SIO_000300: 5.826e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: -2.323e0

MQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 7.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.807e0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38101
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.024445068839562e-5
allele num: 14236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62984
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.168e0

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.326e1

InbreedingCoeff
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SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.389731e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.746985664103295e-5
allele num: 63198
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.941552131056504e-5
allele num: 14406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.25e-1

FS
type: SiteQuality
SIO_000300: 6.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.396957e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63620
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.019575856443719e-4
allele num: 9808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 4.18e0

QD
type: SiteQuality
SIO_000300: 8.029999999999999e0

DP
type: SiteQuality
SIO_000300: 1.408957e6

MQRankSum
type: SiteQuality
SIO_000300: 2.83e0

VQSLOD
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SIO_000300: -2.073e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQ
type: SiteQuality
SIO_000300: 5.744e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.669624095260332e-4
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.476028e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.319e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.405999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.0416e1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

QD
type: SiteQuality
SIO_000300: 1.312e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

MQRankSum
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SIO_000300: -1.839e0

VQSLOD
type: SiteQuality
SIO_000300: -1.867e0

FS
type: SiteQuality
SIO_000300: 7.526e0

DP
type: SiteQuality
SIO_000300: 1.477871e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 1
allele frequency: 6.098304671301378e-5
allele num: 16398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.525785779676533e-4
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.738203425375742e-5
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.485021e6

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
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ReadPosRankSum
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SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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FS
type: SiteQuality
SIO_000300: 7.717e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503849855630414e-5
allele num: 66496
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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African
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South Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.64e-1

FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.872e1

MQRankSum
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SIO_000300: -7.33e-1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 160
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Latino
type: Population
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allele num: 11480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

Other
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.78e-1

QD
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FS
type: SiteQuality
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MQ
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.612785229054172e-4
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.02e-1

DP
type: SiteQuality
SIO_000300: 1.498158e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.206e0

FS
type: SiteQuality
SIO_000300: 1.897e0

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.909e1

QD
type: SiteQuality
SIO_000300: 1.884e1

VQSLOD
type: SiteQuality
SIO_000300: -1.508e0

FS
type: SiteQuality
SIO_000300: 1.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.026e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

DP
type: SiteQuality
SIO_000300: 1.500561e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.719e0

DP
type: SiteQuality
SIO_000300: 1.500792e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

FS
type: SiteQuality
SIO_000300: 5.645e0

QD
type: SiteQuality
SIO_000300: 1.184e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: -1.404e0

MQRankSum
type: SiteQuality
SIO_000300: -1.041e0

FS
type: SiteQuality
SIO_000300: 3.358e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.43e-1

QD
type: SiteQuality
SIO_000300: 1.864e1

DP
type: SiteQuality
SIO_000300: 1.5014e6

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.48e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.89e-1

DP
type: SiteQuality
SIO_000300: 1.503824e6

FS
type: SiteQuality
SIO_000300: 4.921e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e0

VQSLOD
type: SiteQuality
SIO_000300: -5.397999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.707e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.503944e6

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.64e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

MQRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.350864553314121e-4
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.62e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

DP
type: SiteQuality
SIO_000300: 1.50497e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7277
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GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -3.299e0

VQSLOD
type: SiteQuality
SIO_000300: -1.503e0

DP
type: SiteQuality
SIO_000300: 1.505334e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e0

FS
type: SiteQuality
SIO_000300: 3.662e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

QD
type: SiteQuality
SIO_000300: 9.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 951
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40382
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-2

VQSLOD
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SIO_000300: -1.508e0

FS
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

QD
type: SiteQuality
SIO_000300: 1.172e1

DP
type: SiteQuality
SIO_000300: 1.50585e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.82e0

FS
type: SiteQuality
SIO_000300: 3.998e0

ReadPosRankSum
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SIO_000300: -1.092e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.349e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 1.506542e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.434e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.112e1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.349e0

DP
type: SiteQuality
SIO_000300: 1.506985e6

VQSLOD
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e0

FS
type: SiteQuality
SIO_000300: 4.645e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

QD
type: SiteQuality
SIO_000300: 1.339e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.507709e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

BaseQRankSum
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SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.505e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.500525036752572e-5
allele num: 66662
num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 3.635482307319437e-4
allele num: 16504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.101e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.96e1

DP
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.000090000900009e-5
allele num: 66666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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QD
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MQRankSum
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MQ
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.60778859527121e-4
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

InbreedingCoeff
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SIO_000300: 1.0e-4

VQSLOD
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DP
type: SiteQuality
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QD
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2543
bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.653846153846154e-4
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.734e1

DP
type: SiteQuality
SIO_000300: 1.509321e6

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
type: SiteQuality
SIO_000300: 1.774e1

VQSLOD
type: SiteQuality
SIO_000300: 4.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.500075000750007e-5
allele num: 66666
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.294e1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

FS
type: SiteQuality
SIO_000300: 7.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

DP
type: SiteQuality
SIO_000300: 1.5096e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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SIO_000300: 1.294e1

DP
type: SiteQuality
SIO_000300: 1.509299e6

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 4.798e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.510167e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

FS
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.911e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.036e0

BaseQRankSum
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SIO_000300: -1.708e0

VQSLOD
type: SiteQuality
SIO_000300: -9.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

DP
type: SiteQuality
SIO_000300: 1.510406e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 1.049e0

BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

QD
type: SiteQuality
SIO_000300: 9.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2322
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 1.513027e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.001e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 1.296e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.31e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 1282

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 102

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 324

GenotypeQuality
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GenotypeQuality
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variant carriers: 41

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 629

GenotypeQuality
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bin: 4.25e1
variant carriers: 40

GenotypeQuality
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variant carriers: 19

GenotypeQuality
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variant carriers: 492

GenotypeQuality
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variant carriers: 55224

GenotypeQuality
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bin: 3.75e1
variant carriers: 50

GenotypeQuality
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variant carriers: 202

GenotypeQuality
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bin: 8.25e1
variant carriers: 997

GenotypeQuality
all individuals: 324
bin: 6.25e1
variant carriers: 324

European (Non-Finnish)
type: Population
allele count: 66671
allele frequency: 9.995352463194507e-1
allele num: 66702
num of homozygotes: 33320

East Asian
type: Population
allele count: 8644
allele frequency: 1.0e0
allele num: 8644
num of homozygotes: 4322

African
type: Population
allele count: 10404
allele frequency: 1.0e0
allele num: 10404
num of homozygotes: 5202

Latino
type: Population
allele count: 11516
allele frequency: 1.0e0
allele num: 11516
num of homozygotes: 5758

European (Finnish)
type: Population
allele count: 6606
allele frequency: 9.993948562783661e-1
allele num: 6610
num of homozygotes: 3301

South Asian
type: Population
allele count: 16506
allele frequency: 1.0e0
allele num: 16506
num of homozygotes: 8253

Other
type: Population
allele count: 908
allele frequency: 1.0e0
allele num: 908
num of homozygotes: 454

QD
type: SiteQuality
SIO_000300: 3.43e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
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SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

FS
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

DP
type: SiteQuality
SIO_000300: 3.621423e6

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29824
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
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GenotypeQuality
all individuals: 1610
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2870
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506477854775535e-5
allele num: 66380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.933405e6

MQRankSum
type: SiteQuality
SIO_000300: -9.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

FS
type: SiteQuality
SIO_000300: 6.894e0

QD
type: SiteQuality
SIO_000300: 1.525e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4204
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7285
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1185
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.054820529821283e-4
allele num: 66362
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.54e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 1.932776e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.189e0

FS
type: SiteQuality
SIO_000300: 5.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

QD
type: SiteQuality
SIO_000300: 2.132e1

VQSLOD
type: SiteQuality
SIO_000300: -2.114e0

GenotypeQuality
all individuals: 4128
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1595
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.437e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.982e0

QD
type: SiteQuality
SIO_000300: 2.582e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 1.218e0

MQRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

DP
type: SiteQuality
SIO_000300: 1.921583e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.96e-1

GenotypeQuality
all individuals: 534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 167
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variant carriers: 0

GenotypeQuality
all individuals: 1576
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 1798
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variant carriers: 0

GenotypeQuality
all individuals: 2728
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7884
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variant carriers: 0

GenotypeQuality
all individuals: 2879
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3970
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variant carriers: 0

GenotypeQuality
all individuals: 7221
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1144
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514830187535977e-5
allele num: 66014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.762227238525207e-4
allele num: 15948
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

DP
type: SiteQuality
SIO_000300: 1.88553e6

FS
type: SiteQuality
SIO_000300: 1.724e0

QD
type: SiteQuality
SIO_000300: 1.355e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.63e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.46e-1

GenotypeQuality
all individuals: 2879
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 167
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GenotypeQuality
all individuals: 7221
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 7884
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variant carriers: 0

GenotypeQuality
all individuals: 200
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1576
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28518
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

FS
type: SiteQuality
SIO_000300: 1.724e0

QD
type: SiteQuality
SIO_000300: 1.355e1

DP
type: SiteQuality
SIO_000300: 1.88553e6

VQSLOD
type: SiteQuality
SIO_000300: 4.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

GenotypeQuality
all individuals: 576
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
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variant carriers: 0

GenotypeQuality
all individuals: 158
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GenotypeQuality
all individuals: 2862
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28385
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7879
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 2.837e0

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

DP
type: SiteQuality
SIO_000300: 1.880753e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
all individuals: 2500
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 321
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GenotypeQuality
all individuals: 1567
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.318716036901302e-5
allele num: 15826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e0

DP
type: SiteQuality
SIO_000300: 1.847337e6

VQSLOD
type: SiteQuality
SIO_000300: -1.051e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQ
type: SiteQuality
SIO_000300: 5.888e1

FS
type: SiteQuality
SIO_000300: 2.686e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.71e-1

QD
type: SiteQuality
SIO_000300: 1.604e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65868
num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 8.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.25e-1

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

DP
type: SiteQuality
SIO_000300: 1.846897e6

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.264062697509797e-4
allele num: 15822
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65870
num of homozygotes: 0

Other
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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ClippingRankSum
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SIO_000300: 7.84e-1

MQRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

South Asian
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allele count: 10
allele frequency: 6.360513929525506e-4
allele num: 15722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520403819254394e-5
allele num: 65772
num of homozygotes: 0

DP
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ClippingRankSum
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SIO_000300: -3.85e-1

ReadPosRankSum
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SIO_000300: -1.76e-1

BaseQRankSum
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QD
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VQSLOD
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SIO_000300: 1.33e0

MQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52114390021296e-5
allele num: 65740
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.576e0

InbreedingCoeff
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SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.684e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-2

DP
type: SiteQuality
SIO_000300: 1.81618e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
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SIO_000300: 3.195e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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QD
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SIO_000300: 1.281e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65752
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.5773573390296e-4
allele num: 6554
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
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MQ
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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allele frequency: 1.937233630375823e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65734
num of homozygotes: 0

Latino
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East Asian
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allele num: 8564
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South Asian
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Other
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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South Asian
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European (Finnish)
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.525739220652406e-5
allele num: 65542
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7173
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1541
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.052316708381662e-5
allele num: 65524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

FS
type: SiteQuality
SIO_000300: 6.04e0

DP
type: SiteQuality
SIO_000300: 1.721096e6

QD
type: SiteQuality
SIO_000300: 1.562e1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1517
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 984
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4522
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171508903467666e-4
allele num: 8536
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.861e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.307e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

FS
type: SiteQuality
SIO_000300: 1.318e0

DP
type: SiteQuality
SIO_000300: 3.085744e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

QD
type: SiteQuality
SIO_000300: 1.193e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 3.091555e6

GenotypeQuality
all individuals: 334
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32089
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 977
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variant carriers: 0

GenotypeQuality
all individuals: 820
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GenotypeQuality
all individuals: 2573
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 9699
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variant carriers: 0

GenotypeQuality
all individuals: 3030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.104240392375986e-5
allele num: 64428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.189e0

DP
type: SiteQuality
SIO_000300: 3.094865e6

VQSLOD
type: SiteQuality
SIO_000300: 7.4e-2

QD
type: SiteQuality
SIO_000300: 1.377e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.421e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
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variant carriers: 0

GenotypeQuality
all individuals: 3360
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 32091
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64534
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.173479366321142e-3
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 3.099988e6

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 3.37e0

QD
type: SiteQuality
SIO_000300: 1.116e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
all individuals: 4551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 1913
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549570768897016e-5
allele num: 64534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e0

FS
type: SiteQuality
SIO_000300: 3.37e0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

DP
type: SiteQuality
SIO_000300: 3.099988e6

GenotypeQuality
all individuals: 3141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 175
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1867
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 56
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variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 2.5e0
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GenotypeQuality
all individuals: 100
bin: 1.75e1
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GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10392
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539029795616843e-5
allele num: 64976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.117158e6

VQSLOD
type: SiteQuality
SIO_000300: -4.072e2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.234e0

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

QD
type: SiteQuality
SIO_000300: 1.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.66e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 2.97612e2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeDepth
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10630
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65080
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.611875326484416e-4
allele num: 11486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

DP
type: SiteQuality
SIO_000300: 3.117093e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 1.153e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 1.134e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.288e0

GenotypeQuality
all individuals: 1872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32071
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 1517
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531065315246348e-5
allele num: 65314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.104e1

FS
type: SiteQuality
SIO_000300: 2.123e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.104e0

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-2

DP
type: SiteQuality
SIO_000300: 3.123322e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e0

GenotypeQuality
all individuals: 278
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14124
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.608242044861763e-4
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.221e0

DP
type: SiteQuality
SIO_000300: 3.142029e6

QD
type: SiteQuality
SIO_000300: 1.362e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.366e0

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 260

GenotypeQuality
all individuals: 1447
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4741
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 24
allele frequency: 2.084418968212611e-3
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.272727272727273e-3
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 215
allele frequency: 2.078499613302397e-2
allele num: 10344
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.335051390110057e-4
allele num: 65966
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.370989854675075e-4
allele num: 14588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.347e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.16e-1

DP
type: SiteQuality
SIO_000300: 3.166627e6

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1916
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variant carriers: 0

GenotypeQuality
all individuals: 166
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 32029
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 2594
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12670
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variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736111111111111e-4
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.864734299516908e-4
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.750371270419872e-5
allele num: 14814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514096235956757e-5
allele num: 66046
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.405e1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 3.148261e6

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 13207
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GenotypeQuality
all individuals: 1936
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GenotypeQuality
all individuals: 950
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
all individuals: 4828
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 141
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32025
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variant carriers: 3

GenotypeQuality
all individuals: 1515
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variant carriers: 0

GenotypeQuality
all individuals: 1919
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020965500573983e-5
allele num: 66204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15408
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 3.155551e6

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13290
bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1941
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.446e0

QD
type: SiteQuality
SIO_000300: 1.191e1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 3.158001e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 649
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13460
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GenotypeQuality
all individuals: 2607
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.039956608208281e-5
allele num: 66372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.334726973267453e-5
allele num: 15786
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.821e0

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 40
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 112
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GenotypeQuality
all individuals: 53
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GenotypeQuality
all individuals: 977
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GenotypeQuality
all individuals: 2611
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GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 13886
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GenotypeQuality
all individuals: 1518
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.178942165101334e-5
allele num: 16184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.157e1

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

DP
type: SiteQuality
SIO_000300: 3.168519e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.973e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.625999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -3.681e-1

GenotypeQuality
all individuals: 328
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2621
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0