http://identifiers.org/exac.variant/4-185599335-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599335
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599335
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 77964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-51A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-51A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5721A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-51A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-51A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-51A>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4865
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8205
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2505
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5470
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

4-185599339-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599339
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599339
    reference: chr 4
allele count: 2
allele frequency: 2.565549797321566e-5
allele num: 77956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-47A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-47A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-47A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5725A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-47A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-47A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8650
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14011
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5486
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

4-185599340-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599340
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599340
    reference: chr 4
allele count: 1
allele frequency: 1.28323580741197e-5
allele num: 77928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-46T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-46T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-46T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-46T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-46T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5726T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19548
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4968
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/4-185599344-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599344
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599344
    reference: chr 4
allele count: 4
allele frequency: 5.111821086261981e-5
allele num: 78250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-42A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-42A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-42A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5730A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-42A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-42A>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17856
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19474
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6435
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5477
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

4-185599349-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599349
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599349
    reference: chr 4
allele count: 115
allele frequency: 1.46139378844101e-3
allele num: 78692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-37A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-37A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5735A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-37A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-37A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-37A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19076
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18008
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16296
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5437
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7858
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8043
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5920
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 9.25e1
  variant carriers: 4
num of homozygotes: 2
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

4-185599350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599350
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599350
    reference: chr 4
allele count: 1
allele frequency: 1.271843919314222e-5
allele num: 78626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-36C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5736C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-36C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-36C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-36C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-36C>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18948
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 8261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 2244
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genotype quality: GenotypeQuality
  all individuals: 5840
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 575
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genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

4-185599353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599353
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599353
    reference: chr 4
allele count: 1
allele frequency: 1.264670174018616e-5
allele num: 79072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-33G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-33G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-33G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-33G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-33G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5739G>A
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5515
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

4-185599359-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599359
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599359
    reference: chr 4
allele count: 2
allele frequency: 2.499000399840064e-5
allele num: 80032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-27A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-27A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-27A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-27A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5745A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-27A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17149
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

4-185599359-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599359
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599359
    reference: chr 4
allele count: 1
allele frequency: 1.249500199920032e-5
allele num: 80032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-27A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5745A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-27A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-27A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-27A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-27A>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
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genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 4844
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

4-185599367-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599367
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599367
    reference: chr 4
allele count: 1
allele frequency: 1.226542377039127e-5
allele num: 81530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-19T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5753T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-19T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-19T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-19T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-19T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14841
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15472
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genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6876
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genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
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genotype quality: GenotypeQuality
  all individuals: 678
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genotype quality: GenotypeQuality
  all individuals: 121
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4142
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genotype quality: GenotypeQuality
  all individuals: 833
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genotype quality: GenotypeQuality
  all individuals: 12754
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genotype quality: GenotypeQuality
  all individuals: 1152
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genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

4-185599372-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599372
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599372
    reference: chr 4
allele count: 1
allele frequency: 1.208926714862545e-5
allele num: 82718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-14A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-14A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-14A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-14A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-14A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5758A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17503
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 455
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genotype depth: GenotypeDepth
  all individuals: 104
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 102
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genotype quality: GenotypeQuality
  all individuals: 443
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genotype quality: GenotypeQuality
  all individuals: 994
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2157
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genotype quality: GenotypeQuality
  all individuals: 720
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1122
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genotype quality: GenotypeQuality
  all individuals: 6384
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

4-185599373-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599373
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599373
    reference: chr 4
allele count: 1
allele frequency: 1.207612791034683e-5
allele num: 82808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5759A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-13A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17418
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 16670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3841
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1396
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 479
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

4-185599380-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599380
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599380
    reference: chr 4
allele count: 1
allele frequency: 1.17932872608911e-5
allele num: 84794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-6A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5766A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-6A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-6A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-6A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-6A>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18767
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4380
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16927
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 7.75e1
  variant carriers: 0
hgvs: c.845-6A>T
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

4-185599383-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599383
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599383
    reference: chr 4
allele count: 1
allele frequency: 1.166480029861889e-5
allele num: 85728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5769T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-3T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-3T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-3T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-3T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-3T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19375
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16512
  bin: 2.25e1
  variant carriers: 0
hgvs: c.845-3T>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

4-185599385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599385
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599385
    reference: chr 4
allele count: 1
allele frequency: 1.158184892636261e-5
allele num: 86342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845-1G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458-1G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845-1G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5771G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376-1G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845-1G>A
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20050
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16513
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 7.75e1
  variant carriers: 0
hgvs: c.845-1G>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

4-185599386-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599386
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599386
    reference: chr 4
allele count: 6
allele frequency: 6.913557486230498e-5
allele num: 86786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.845G>T
  hgvsp: ENSP00000425316.1:p.Gly282Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5772G>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.458G>T
  hgvsp: ENSP00000421913.1:p.Gly153Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.845G>T
  hgvsp: ENSP00000313816.6:p.Gly282Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.845G>T
  hgvsp: ENSP00000420860.1:p.Gly282Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*376G>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20302
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly282Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

4-185599394-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599394
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599394
    reference: chr 4
allele count: 38
allele frequency: 4.244387356193455e-4
allele num: 89530
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.853A>G
  hgvsp: ENSP00000313816.6:p.Thr285Ala
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.466A>G
  hgvsp: ENSP00000421913.1:p.Thr156Ala
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.853A>G
  hgvsp: ENSP00000425316.1:p.Thr285Ala
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.853A>G
  hgvsp: ENSP00000420860.1:p.Thr285Ala
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5780A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*384A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10106
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 22397
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 14821
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21540
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15505
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 9.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr285Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

4-185599404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599404
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599404
    reference: chr 4
allele count: 1
allele frequency: 1.076727609449362e-5
allele num: 92874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*394G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.863G>A
  hgvsp: ENSP00000425316.1:p.Arg288Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.863G>A
  hgvsp: ENSP00000420860.1:p.Arg288Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.476G>A
  hgvsp: ENSP00000421913.1:p.Arg159Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5790G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.863G>A
  hgvsp: ENSP00000313816.6:p.Arg288Lys
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg288Lys
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

4-185599408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599408
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599408
    reference: chr 4
allele count: 1
allele frequency: 1.060355431140518e-5
allele num: 94308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*398C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5794C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.867C>T
  hgvsp: ENST00000512834.1:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.867C>T
  hgvsp: ENST00000503752.1:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.480C>T
  hgvsp: ENST00000515774.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.867C>T
  hgvsp: ENST00000314970.6:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25908
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25059
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13589
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3015
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn289Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

4-185599412-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599412
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599412
    reference: chr 4
allele count: 7
allele frequency: 7.34137388568432e-5
allele num: 95350
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.871C>T
  hgvsp: ENSP00000313816.6:p.Arg291Trp
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.871C>T
  hgvsp: ENSP00000425316.1:p.Arg291Trp
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*402C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.871C>T
  hgvsp: ENSP00000420860.1:p.Arg291Trp
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.484C>T
  hgvsp: ENSP00000421913.1:p.Arg162Trp
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5798C>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26789
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg291Trp
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

4-185599413-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599413
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599413
    reference: chr 4
allele count: 20
allele frequency: 2.082335547550132e-4
allele num: 96046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5799G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.872G>A
  hgvsp: ENSP00000425316.1:p.Arg291Gln
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.872G>A
  hgvsp: ENSP00000420860.1:p.Arg291Gln
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.485G>A
  hgvsp: ENSP00000421913.1:p.Arg162Gln
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*403G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.872G>A
  hgvsp: ENSP00000313816.6:p.Arg291Gln
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7359
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27169
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11803
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 26466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg291Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

4-185599419-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599419
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599419
    reference: chr 4
allele count: 2
allele frequency: 2.019345328244583e-5
allele num: 99042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.878A>G
  hgvsp: ENSP00000425316.1:p.Tyr293Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.878A>G
  hgvsp: ENSP00000313816.6:p.Tyr293Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.491A>G
  hgvsp: ENSP00000421913.1:p.Tyr164Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*409A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.878A>G
  hgvsp: ENSP00000420860.1:p.Tyr293Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5805A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29073
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr293Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

4-185599423-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599423
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599423
    reference: chr 4
allele count: 2
allele frequency: 1.998321410015587e-5
allele num: 100084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.495A>G
  hgvsp: ENST00000515774.1:c.495A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5809A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.882A>G
  hgvsp: ENST00000503752.1:c.882A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*413A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.882A>G
  hgvsp: ENST00000314970.6:c.882A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.882A>G
  hgvsp: ENST00000512834.1:c.882A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29597
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11074
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys294Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-185599428-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599428
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599427
    reference: chr 4
allele count: 1
allele frequency: 9.841938468200698e-6
allele num: 101606
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.892delA
  hgvsp: ENSP00000425316.1:p.Ile298LeufsTer90
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.892delA
  hgvsp: ENSP00000313816.6:p.Ile298LeufsTer69
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*423delA
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.505delA
  hgvsp: ENSP00000421913.1:p.Ile169LeufsTer69
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.892delA
  hgvsp: ENSP00000420860.1:p.Ile298LeufsTer69
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5819delA
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile298LeufsTer69
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CA
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

4-185599432-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599432
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599432
    reference: chr 4
allele count: 1
allele frequency: 9.696311523096614e-6
allele num: 103132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5818A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.891A>T
  hgvsp: ENSP00000420860.1:p.Lys297Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*422A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.504A>T
  hgvsp: ENSP00000421913.1:p.Lys168Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.891A>T
  hgvsp: ENSP00000313816.6:p.Lys297Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.2A>T
  hgvsp: ENSP00000424639.1:p.Lys1?
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.891A>T
  hgvsp: ENSP00000425316.1:p.Lys297Asn
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31461
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31654
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys1?
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

4-185599440-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599440
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599440
    reference: chr 4
allele count: 1
allele frequency: 9.46611132146914e-6
allele num: 105640
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.899A>G
  hgvsp: ENSP00000313816.6:p.Lys300Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.899A>G
  hgvsp: ENSP00000420860.1:p.Lys300Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.512A>G
  hgvsp: ENSP00000421913.1:p.Lys171Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.10A>G
  hgvsp: ENSP00000424639.1:p.Ser4Gly
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.899A>G
  hgvsp: ENSP00000425316.1:p.Lys300Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*430A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5826A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32865
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys300Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

4-185599442-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599442
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599442
    reference: chr 4
allele count: 1
allele frequency: 9.414422895876483e-6
allele num: 106220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5828C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.901C>T
  hgvsp: ENSP00000425316.1:p.Arg301Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.901C>T
  hgvsp: ENSP00000420860.1:p.Arg301Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.901C>T
  hgvsp: ENSP00000313816.6:p.Arg301Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*432C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.514C>T
  hgvsp: ENSP00000421913.1:p.Arg172Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.12C>T
  hgvsp: ENST00000508001.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33066
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg301Cys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

4-185599443-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599443
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599443
    reference: chr 4
allele count: 20
allele frequency: 1.868530214133563e-4
allele num: 107036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*433G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.13G>A
  hgvsp: ENSP00000424639.1:p.Val5Met
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.902G>A
  hgvsp: ENSP00000425316.1:p.Arg301His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.515G>A
  hgvsp: ENSP00000421913.1:p.Arg172His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.902G>A
  hgvsp: ENSP00000313816.6:p.Arg301His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.902G>A
  hgvsp: ENSP00000420860.1:p.Arg301His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5829G>A
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33513
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8708
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4156
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg301His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

4-185599443-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599443
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599443
    reference: chr 4
allele count: 1
allele frequency: 9.342651070667812e-6
allele num: 107036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*433G>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.13G>C
  hgvsp: ENSP00000424639.1:p.Val5Leu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.515G>C
  hgvsp: ENSP00000421913.1:p.Arg172Pro
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.902G>C
  hgvsp: ENSP00000420860.1:p.Arg301Pro
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.902G>C
  hgvsp: ENSP00000313816.6:p.Arg301Pro
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.902G>C
  hgvsp: ENSP00000425316.1:p.Arg301Pro
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5829G>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33513
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4156
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg301Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-185599468-TAAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599468
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599465
    reference: chr 4
allele count: 1
allele frequency: 8.779477094344261e-6
allele num: 113902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.543_545delCAA
  hgvsp: ENSP00000421913.1:p.Asn181del
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.41_43delCAA
  hgvsp: ENSP00000424639.1:p.Thr14del
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*461_*463delCAA
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.930_932delCAA
  hgvsp: ENSP00000313816.6:p.Asn310del
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5857_*284+5859delCAA
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.930_932delCAA
  hgvsp: ENSP00000425316.1:p.Asn310del
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.930_932delCAA
  hgvsp: ENSP00000420860.1:p.Asn310del
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn310del
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: TAAC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

4-185599473-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599473
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599473
    reference: chr 4
allele count: 6
allele frequency: 5.217391304347826e-5
allele num: 115000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.932A>T
  hgvsp: ENSP00000425316.1:p.Lys311Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*463A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.932A>T
  hgvsp: ENSP00000313816.6:p.Lys311Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.43A>T
  hgvsp: ENSP00000424639.1:p.Asn15Tyr
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.932A>T
  hgvsp: ENSP00000420860.1:p.Lys311Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5859A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.545A>T
  hgvsp: ENSP00000421913.1:p.Lys182Ile
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11565
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys311Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

4-185599478-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599478
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599478
    reference: chr 4
allele count: 3
allele frequency: 2.59116585188896e-5
allele num: 115778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5864T>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.937T>G
  hgvsp: ENSP00000313816.6:p.Phe313Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.550T>G
  hgvsp: ENSP00000421913.1:p.Phe184Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.937T>G
  hgvsp: ENSP00000420860.1:p.Phe313Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.937T>G
  hgvsp: ENSP00000425316.1:p.Phe313Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.48T>G
  hgvsp: ENSP00000424639.1:p.Phe16Leu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*468T>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5352
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe313Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

4-185599484-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599484
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599484
    reference: chr 4
allele count: 3
allele frequency: 2.573693421639614e-5
allele num: 116564
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.943A>G
  hgvsp: ENSP00000425316.1:p.Ile315Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.556A>G
  hgvsp: ENSP00000421913.1:p.Ile186Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5870A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.54A>G
  hgvsp: ENST00000508001.1:c.54A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.943A>G
  hgvsp: ENSP00000313816.6:p.Ile315Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*474A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.943A>G
  hgvsp: ENSP00000420860.1:p.Ile315Val
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile315Val
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

4-185599485-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599485
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599485
    reference: chr 4
allele count: 1
allele frequency: 8.560031500915923e-6
allele num: 116822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5871T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.944T>C
  hgvsp: ENSP00000420860.1:p.Ile315Thr
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*475T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.944T>C
  hgvsp: ENSP00000425316.1:p.Ile315Thr
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.55T>C
  hgvsp: ENSP00000424639.1:p.Tyr19His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.944T>C
  hgvsp: ENSP00000313816.6:p.Ile315Thr
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.557T>C
  hgvsp: ENSP00000421913.1:p.Ile186Thr
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile315Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

4-185599489-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599489
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599489
    reference: chr 4
allele count: 13192
allele frequency: 1.116773614614903e-1
allele num: 118126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.561G>A
  hgvsp: ENST00000515774.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.59G>A
  hgvsp: ENSP00000424639.1:p.Ser20Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*479G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.948G>A
  hgvsp: ENST00000314970.6:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.948G>A
  hgvsp: ENST00000512834.1:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5875G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.948G>A
  hgvsp: ENST00000503752.1:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30795
  bin: 2.25e1
  variant carriers: 1081
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 3.25e1
  variant carriers: 1775
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 581
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 4.25e1
  variant carriers: 1181
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 1.75e1
  variant carriers: 506
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 9.75e1
  variant carriers: 1337
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.75e1
  variant carriers: 1612
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 793
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.75e1
  variant carriers: 1684
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 4.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 8.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 33648
  bin: 6.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.25e1
  variant carriers: 31
hgvs: p.Ser20Asn
num of homozygotes: 884
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

4-185599491-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599491
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599491
    reference: chr 4
allele count: 4
allele frequency: 3.376211215773659e-5
allele num: 118476
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*481C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.563C>G
  hgvsp: ENSP00000421913.1:p.Ser188Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.61C>G
  hgvsp: ENSP00000424639.1:p.Gln21Glu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.950C>G
  hgvsp: ENSP00000313816.6:p.Ser317Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.950C>G
  hgvsp: ENSP00000425316.1:p.Ser317Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.950C>G
  hgvsp: ENSP00000420860.1:p.Ser317Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5877C>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14346
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31453
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6002
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser317Ter
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

4-185599495-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599495
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599495
    reference: chr 4
allele count: 20
allele frequency: 1.68219897049423e-4
allele num: 118892
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.954A>G
  hgvsp: ENST00000512834.1:c.954A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.954A>G
  hgvsp: ENST00000503752.1:c.954A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.954A>G
  hgvsp: ENST00000314970.6:c.954A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*485A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.65A>G
  hgvsp: ENSP00000424639.1:p.Lys22Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5881A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.567A>G
  hgvsp: ENST00000515774.1:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14516
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31805
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4177
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6057
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys22Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

4-185599497-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599497
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599497
    reference: chr 4
allele count: 1
allele frequency: 8.401384548173538e-6
allele num: 119028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.956A>G
  hgvsp: ENSP00000425316.1:p.Asp319Gly
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*487A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.956A>G
  hgvsp: ENSP00000420860.1:p.Asp319Gly
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.956A>G
  hgvsp: ENSP00000313816.6:p.Asp319Gly
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.67A>G
  hgvsp: ENSP00000424639.1:p.Met23Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5883A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.569A>G
  hgvsp: ENSP00000421913.1:p.Asp190Gly
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31920
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6090
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp319Gly
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

4-185599507-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599507
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599507
    reference: chr 4
allele count: 1
allele frequency: 8.364001338240215e-6
allele num: 119560
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.77C>G
  hgvsp: ENSP00000424639.1:p.Thr26Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.966C>G
  hgvsp: ENSP00000425316.1:p.Asp322Glu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.966C>G
  hgvsp: ENSP00000420860.1:p.Asp322Glu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.966C>G
  hgvsp: ENSP00000313816.6:p.Asp322Glu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*497C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.579C>G
  hgvsp: ENSP00000421913.1:p.Asp193Glu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5893C>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp322Glu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

4-185599507-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599507
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599507
    reference: chr 4
allele count: 11
allele frequency: 9.200401472064236e-5
allele num: 119560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*497C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.966C>T
  hgvsp: ENST00000314970.6:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.77C>T
  hgvsp: ENSP00000424639.1:p.Thr26Met
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5893C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.966C>T
  hgvsp: ENST00000512834.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.579C>T
  hgvsp: ENST00000515774.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.966C>T
  hgvsp: ENST00000503752.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6131
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr26Met
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

4-185599508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599508
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599508
    reference: chr 4
allele count: 2
allele frequency: 1.671709657466691e-5
allele num: 119638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.967G>A
  hgvsp: ENSP00000420860.1:p.Glu323Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.967G>A
  hgvsp: ENSP00000313816.6:p.Glu323Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.580G>A
  hgvsp: ENSP00000421913.1:p.Glu194Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*498G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.78G>A
  hgvsp: ENST00000508001.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.967G>A
  hgvsp: ENSP00000425316.1:p.Glu323Lys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5894G>A
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu323Lys
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

4-185599514-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599514
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599514
    reference: chr 4
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.973C>T
  hgvsp: ENSP00000313816.6:p.Gln325Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.84C>T
  hgvsp: ENST00000508001.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.973C>T
  hgvsp: ENSP00000425316.1:p.Gln325Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*504C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5900C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.586C>T
  hgvsp: ENSP00000421913.1:p.Gln196Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.973C>T
  hgvsp: ENSP00000420860.1:p.Gln325Ter
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln325Ter
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

4-185599518-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599518
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599518
    reference: chr 4
allele count: 1
allele frequency: 8.337502084375522e-6
allele num: 119940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.977A>G
  hgvsp: ENSP00000425316.1:p.Tyr326Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.977A>G
  hgvsp: ENSP00000313816.6:p.Tyr326Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.88A>G
  hgvsp: ENSP00000424639.1:p.Ile30Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.590A>G
  hgvsp: ENSP00000421913.1:p.Tyr197Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*508A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.977A>G
  hgvsp: ENSP00000420860.1:p.Tyr326Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5904A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr326Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-185599525-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599525
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599525
    reference: chr 4
allele count: 1
allele frequency: 8.332361224523806e-6
allele num: 120014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5911C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*515C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.984C>G
  hgvsp: ENST00000314970.6:c.984C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.984C>G
  hgvsp: ENST00000503752.1:c.984C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.95C>G
  hgvsp: ENSP00000424639.1:p.Ser32Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.597C>G
  hgvsp: ENST00000515774.1:c.597C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.984C>G
  hgvsp: ENST00000512834.1:c.984C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6184
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser32Cys
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

4-185599525-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599525
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599525
    reference: chr 4
allele count: 1
allele frequency: 8.332361224523806e-6
allele num: 120014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.95C>T
  hgvsp: ENSP00000424639.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.597C>T
  hgvsp: ENST00000515774.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.984C>T
  hgvsp: ENST00000503752.1:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.984C>T
  hgvsp: ENST00000314970.6:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5911C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.984C>T
  hgvsp: ENST00000512834.1:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*515C>T
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser32Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-185599539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599539
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599539
    reference: chr 4
allele count: 1
allele frequency: 8.329030001166064e-6
allele num: 120062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*529G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5925G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.998G>A
  hgvsp: ENSP00000420860.1:p.Ser333Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.611G>A
  hgvsp: ENSP00000421913.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.998G>A
  hgvsp: ENSP00000313816.6:p.Ser333Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.998G>A
  hgvsp: ENSP00000425316.1:p.Ser333Asn
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.109G>A
  hgvsp: ENSP00000424639.1:p.Ala37Thr
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15354
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4161
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41706
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser333Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

4-185599540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599540
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599540
    reference: chr 4
allele count: 4
allele frequency: 3.330835206928137e-5
allele num: 120090
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.999C>T
  hgvsp: ENST00000314970.6:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.110C>T
  hgvsp: ENSP00000424639.1:p.Ala37Val
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.999C>T
  hgvsp: ENST00000512834.1:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.612C>T
  hgvsp: ENST00000515774.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.999C>T
  hgvsp: ENST00000503752.1:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5926C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423409
  ensembl transcript: ENST00000506278
  gene symbol: PRIMPOL
  hgvsc: ENST00000506278.1:c.*530C>T
  variant of: http://identifiers.org/hgnc/26575
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15386
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4164
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala37Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-185599544-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599544
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599544
    reference: chr 4
allele count: 1
allele frequency: 8.330417687142833e-6
allele num: 120042
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1003G>A
  hgvsp: ENSP00000313816.6:p.Val335Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.114G>A
  hgvsp: ENSP00000424639.1:p.Met38Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.616G>A
  hgvsp: ENSP00000421913.1:p.Val206Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5930G>A
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1003G>A
  hgvsp: ENSP00000420860.1:p.Val335Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1003G>A
  hgvsp: ENSP00000425316.1:p.Val335Ile
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val335Ile
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

4-185599548-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599548
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599548
    reference: chr 4
allele count: 2
allele frequency: 1.666416704161042e-5
allele num: 120018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1007G>T
  hgvsp: ENSP00000425316.1:p.Arg336Met
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.620G>T
  hgvsp: ENSP00000421913.1:p.Arg207Met
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.118G>T
  hgvsp: ENSP00000424639.1:p.Val40Leu
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1007G>T
  hgvsp: ENSP00000420860.1:p.Arg336Met
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1007G>T
  hgvsp: ENSP00000313816.6:p.Arg336Met
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5934G>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4161
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41655
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg336Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD

4-185599551-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599551
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599551
    reference: chr 4
allele count: 3
allele frequency: 2.501167211365304e-5
allele num: 119944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1007+3A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5937A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.620+3A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.118+3A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1007+3A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1007+3A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41459
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1007+3A>G
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

4-185599552-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599552
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599552
    reference: chr 4
allele count: 6
allele frequency: 5.00150045013504e-5
allele num: 119964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5938T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1007+4T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1007+4T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1007+4T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.620+4T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.118+4T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1007+4T>C
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

4-185599572-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599572
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599572
    reference: chr 4
allele count: 1217
allele frequency: 1.017796808617402e-2
allele num: 119572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.118+24A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1007+24A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.620+24A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1007+24A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1007+24A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5958A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 1.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 3.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 29374
  bin: 2.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14988
  bin: 2.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 3.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 1.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5246
  bin: 9.75e1
  variant carriers: 1200
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 9
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

4-185599574-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599574
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599574
    reference: chr 4
allele count: 1
allele frequency: 8.369041242635244e-6
allele num: 119488
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1007+26T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.620+26T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1007+26T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.118+26T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5960T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1007+26T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38070
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

4-185599579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185599579
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185599579
    reference: chr 4
allele count: 1
allele frequency: 8.380824673147837e-6
allele num: 119320
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1007+31A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*284+5965A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.118+31A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1007+31A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.620+31A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1007+31A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-185603362-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603362
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603362
    reference: chr 4
allele count: 2
allele frequency: 1.78536358929496e-5
allele num: 112022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-40T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-40T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-40T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-40T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3201T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3204T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18560
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 146
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genotype depth: GenotypeDepth
  all individuals: 698
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genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 22511
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

4-185603367-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603367
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603367
    reference: chr 4
allele count: 1
allele frequency: 8.883361463977969e-6
allele num: 112570
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-35T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3199T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-35T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3196T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-35T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-35T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 205
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 3203
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genotype quality: GenotypeQuality
  all individuals: 90
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2765
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 27646
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genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

4-185603372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603372
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603372
    reference: chr 4
allele count: 1
allele frequency: 8.842202062001521e-6
allele num: 113094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3191C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-30C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-30C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-30C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3194C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-30C>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 1.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 761
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 133
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

4-185603373-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603373
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603373
    reference: chr 4
allele count: 12
allele frequency: 1.058779932591011e-4
allele num: 113338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-29T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-29T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3190T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-29T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-29T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3193T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27139
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33062
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

4-185603380-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603380
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603380
    reference: chr 4
allele count: 1
allele frequency: 8.743551630672379e-6
allele num: 114370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-22C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-22C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-22C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3186C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-22C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3183C>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ

4-185603384-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603384
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603384
    reference: chr 4
allele count: 4
allele frequency: 3.46662506716586e-5
allele num: 115386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3182T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-18T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-18T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3179T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-18T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-18T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

4-185603387-CTATTTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603387
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603380
    reference: chr 4
allele count: 1
allele frequency: 8.62083829031535e-6
allele num: 115998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-13_1008-7delATTTCTT
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-13_1008-7delATTTCTT
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-13_621-7delATTTCTT
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-13_1008-7delATTTCTT
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3696
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1008-13_1008-7delATTTCTT
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
reference allele: CTATTTCT
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

4-185603389-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603389
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603389
    reference: chr 4
allele count: 2
allele frequency: 1.71650245459851e-5
allele num: 116516
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3177A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3174A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-13A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-13A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35242
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

4-185603395-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603395
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603395
    reference: chr 4
allele count: 1
allele frequency: 8.494444633209881e-6
allele num: 117724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3168T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-7T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-7T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-7T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-7T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3171T>C
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1008-7T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ

4-185603400-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603400
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603400
    reference: chr 4
allele count: 1
allele frequency: 8.430992327796981e-6
allele num: 118610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3163A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1008-2A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1008-2A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1008-2A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3166A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.621-2A>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48011
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1008-2A>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

4-185603418-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603418
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603419
    reference: chr 4
allele count: 1
allele frequency: 8.320713584396998e-6
allele num: 120182
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1025dupG
  hgvsp: ENSP00000425316.1:p.Ile343AsnfsTer5
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1025dupG
  hgvsp: ENSP00000420860.1:p.Ile343AsnfsTer5
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1025dupG
  hgvsp: ENSP00000313816.6:p.Ile343AsnfsTer5
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3144dupG
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3147dupG
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.638dupG
  hgvsp: ENSP00000421913.1:p.Ile214AsnfsTer5
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile343AsnfsTer5
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

4-185603418-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603418
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603418
    reference: chr 4
allele count: 1
allele frequency: 8.320713584396998e-6
allele num: 120182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.637C>T
  hgvsp: ENSP00000421913.1:p.Arg213Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1024C>T
  hgvsp: ENSP00000425316.1:p.Arg342Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1024C>T
  hgvsp: ENSP00000313816.6:p.Arg342Ter
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3148C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3145C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1024C>T
  hgvsp: ENSP00000420860.1:p.Arg342Ter
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg342Ter
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP

4-185603421-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603421
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603421
    reference: chr 4
allele count: 1
allele frequency: 8.309788931361144e-6
allele num: 120340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3142A>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1027A>T
  hgvsp: ENSP00000420860.1:p.Ile343Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1027A>T
  hgvsp: ENSP00000425316.1:p.Ile343Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1027A>T
  hgvsp: ENSP00000313816.6:p.Ile343Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.640A>T
  hgvsp: ENSP00000421913.1:p.Ile214Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3145A>T
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile343Phe
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

4-185603428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603428
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603428
    reference: chr 4
allele count: 1
allele frequency: 8.297791128001726e-6
allele num: 120514
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3138C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3135C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1034C>T
  hgvsp: ENSP00000313816.6:p.Thr345Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.647C>T
  hgvsp: ENSP00000421913.1:p.Thr216Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1034C>T
  hgvsp: ENSP00000420860.1:p.Thr345Ile
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1034C>T
  hgvsp: ENSP00000425316.1:p.Thr345Ile
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr345Ile
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

4-185603430-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603430
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603430
    reference: chr 4
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3133T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3136T>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1036T>C
  hgvsp: ENSP00000420860.1:p.Cys346Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1036T>C
  hgvsp: ENSP00000425316.1:p.Cys346Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.649T>C
  hgvsp: ENSP00000421913.1:p.Cys217Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1036T>C
  hgvsp: ENSP00000313816.6:p.Cys346Arg
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys346Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

4-185603440-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603440
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603440
    reference: chr 4
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1046C>G
  hgvsp: ENSP00000420860.1:p.Ser349Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3123C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3126C>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1046C>G
  hgvsp: ENSP00000313816.6:p.Ser349Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.659C>G
  hgvsp: ENSP00000421913.1:p.Ser220Cys
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1046C>G
  hgvsp: ENSP00000425316.1:p.Ser349Cys
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser349Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS

4-185603440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603440
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603440
    reference: chr 4
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.659C>T
  hgvsp: ENSP00000421913.1:p.Ser220Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3126C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1046C>T
  hgvsp: ENSP00000420860.1:p.Ser349Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1046C>T
  hgvsp: ENSP00000425316.1:p.Ser349Phe
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3123C>T
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1046C>T
  hgvsp: ENSP00000313816.6:p.Ser349Phe
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser349Phe
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-185603443-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603443
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603443
    reference: chr 4
allele count: 7
allele frequency: 5.807297283844099e-5
allele num: 120538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1049A>G
  hgvsp: ENSP00000420860.1:p.Gln350Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3123A>G
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1049A>G
  hgvsp: ENSP00000425316.1:p.Gln350Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.662A>G
  hgvsp: ENSP00000421913.1:p.Gln221Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1049A>G
  hgvsp: ENSP00000313816.6:p.Gln350Arg
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3120A>G
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln350Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/4-185603453-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185603453
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 185603453
    reference: chr 4
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000421913
  ensembl transcript: ENST00000515774
  gene symbol: PRIMPOL
  hgvsc: ENST00000515774.1:c.672A>C
  hgvsp: ENSP00000421913.1:p.Gln224His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000420860
  ensembl transcript: ENST00000503752
  gene symbol: PRIMPOL
  hgvsc: ENST00000503752.1:c.1059A>C
  hgvsp: ENSP00000420860.1:p.Gln353His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000424639
  ensembl transcript: ENST00000508001
  gene symbol: PRIMPOL
  hgvsc: ENST00000508001.1:c.119-3110A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000313816
  ensembl transcript: ENST00000314970
  gene symbol: PRIMPOL
  hgvsc: ENST00000314970.6:c.1059A>C
  hgvsp: ENSP00000313816.6:p.Gln353His
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000423353
  ensembl transcript: ENST00000509002
  gene symbol: PRIMPOL
  hgvsc: ENST00000509002.1:c.*285-3113A>C
  variant of: http://identifiers.org/hgnc/26575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164306
  ensembl protein: ENSP00000425316
  ensembl transcript: ENST00000512834
  gene symbol: PRIMPOL
  hgvsc: ENST00000512834.1:c.1059A>C
  hgvsp: ENSP00000425316.1:p.Gln353His
  variant of: http://identifiers.org/hgnc/26575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Gln353His
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 2170
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 12525
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2621
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6259
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.323e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.81055e5

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

GenotypeQuality
all individuals: 557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.463418239148643e-5
allele num: 40594
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.450536698578474e-4
allele num: 6894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4990
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.059e0

VQSLOD
type: SiteQuality
SIO_000300: 9.61e-1

QD
type: SiteQuality
SIO_000300: 1.621e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.45e-1

DP
type: SiteQuality
SIO_000300: 8.86482e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

GenotypeQuality
all individuals: 2268
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5479
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.462811545660526e-5
allele num: 40604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4990
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.228e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.8839e5

GenotypeQuality
all individuals: 2149
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2278
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.811616954474098e-5
allele num: 40768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.257e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 8.99143e5

GenotypeQuality
all individuals: 2139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 853
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1600
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2251
bin: 9.75e1
variant carriers: 119

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 706
bin: 7.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 1.332977872567315e-4
allele num: 7502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41006
num of homozygotes: 0

African
type: Population
allele count: 114
allele frequency: 1.63981588032221e-2
allele num: 6952
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11964
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5016
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 1.943e0

QD
type: SiteQuality
SIO_000300: 1.393e1

DP
type: SiteQuality
SIO_000300: 9.1558e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8007
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16443
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.438548575887632e-5
allele num: 41008
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.19962e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 4.393e0

QD
type: SiteQuality
SIO_000300: 1.288e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.409999999999999e-1

GenotypeQuality
all individuals: 746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9773
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7914
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.427891618918131e-5
allele num: 41188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12084
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.814e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

FS
type: SiteQuality
SIO_000300: 3.617e0

DP
type: SiteQuality
SIO_000300: 9.32649e5

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

QD
type: SiteQuality
SIO_000300: 8.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

GenotypeQuality
all individuals: 1075
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7556
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 358
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5278
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.143322475570033e-5
allele num: 12280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.399692839316567e-5
allele num: 41672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5060
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 9.59695e5

QD
type: SiteQuality
SIO_000300: 1.386e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 7.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.036e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 143
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
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variant carriers: 0

GenotypeQuality
all individuals: 7556
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41672
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.313025210084034e-4
allele num: 7616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.036e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.386e1

DP
type: SiteQuality
SIO_000300: 9.59695e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 17111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 9.25e1
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GenotypeQuality
all individuals: 2152
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.404494382022472e-4
allele num: 7120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5124
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

DP
type: SiteQuality
SIO_000300: 9.96779e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.496e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.682e1

QD
type: SiteQuality
SIO_000300: 1.333e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.04e-1

GenotypeQuality
all individuals: 730
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
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variant carriers: 0

GenotypeQuality
all individuals: 1481
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GenotypeQuality
all individuals: 17240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
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GenotypeQuality
all individuals: 912
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GenotypeQuality
all individuals: 15019
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.323204163181861e-5
allele num: 43044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.573e0

DP
type: SiteQuality
SIO_000300: 1.021489e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.345e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.492e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 7.64e0

GenotypeQuality
all individuals: 509
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6261
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
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variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 4.75e1
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GenotypeQuality
all individuals: 977
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.323420074349442e-5
allele num: 43040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: 3.34e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.027067e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 582
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3057
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1082
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5609
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.362397820163488e-4
allele num: 7340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13286
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.26e0

FS
type: SiteQuality
SIO_000300: 9.513e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.060697e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.171e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

GenotypeQuality
all individuals: 2377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5327
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 701
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.421701053881549e-5
allele num: 13474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.052e1

DP
type: SiteQuality
SIO_000300: 1.074663e6

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

GenotypeQuality
all individuals: 127
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18899
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variant carriers: 0

GenotypeQuality
all individuals: 4135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.344447432105405e-4
allele num: 7438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44816
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.26e0

MQRankSum
type: SiteQuality
SIO_000300: -8.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 1.08615e6

GenotypeQuality
all individuals: 19145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4072
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
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variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.393673110720562e-4
allele num: 13656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.091384e6

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 1.692e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.405e0

QD
type: SiteQuality
SIO_000300: 2.026e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

GenotypeQuality
all individuals: 3667
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 889
bin: 7.5e0
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GenotypeQuality
all individuals: 4377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
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variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 7.089151450053705e-4
allele num: 46550
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.346866932644919e-4
allele num: 8522
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.90625e-4
allele num: 7680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14002
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.281e1

FS
type: SiteQuality
SIO_000300: 1.212e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 1.130435e6

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

GenotypeQuality
all individuals: 1077
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
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variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
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variant carriers: 0

GenotypeQuality
all individuals: 424
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variant carriers: 0

GenotypeQuality
all individuals: 23379
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6812
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.120322652924042e-4
allele num: 8926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48448
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

DP
type: SiteQuality
SIO_000300: 1.174e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

QD
type: SiteQuality
SIO_000300: 1.42e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.177e0

GenotypeQuality
all individuals: 823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 304
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variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 428
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.029467873523562e-5
allele num: 49274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.378e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.884e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.35e0

FS
type: SiteQuality
SIO_000300: 1.922e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.119e0

VQSLOD
type: SiteQuality
SIO_000300: -1.088e0

DP
type: SiteQuality
SIO_000300: 1.191989e6

GenotypeQuality
all individuals: 674
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.5e0
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GenotypeQuality
all individuals: 3121
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1885
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12972
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.223391240518718e-4
allele num: 8174
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.441629955947137e-4
allele num: 14528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.005535277365529e-5
allele num: 49862
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

FS
type: SiteQuality
SIO_000300: 5.535e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.210922e6

MQ
type: SiteQuality
SIO_000300: 5.897e1

QD
type: SiteQuality
SIO_000300: 9.75e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
all individuals: 114
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12724
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variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 5.25e1
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GenotypeQuality
all individuals: 546
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GenotypeQuality
all individuals: 1039
bin: 7.25e1
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GenotypeQuality
all individuals: 438
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GenotypeQuality
all individuals: 1270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074806534823732e-4
allele num: 9304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.182432970005569e-4
allele num: 50276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.055921052631579e-4
allele num: 14592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

DP
type: SiteQuality
SIO_000300: 1.219359e6

GenotypeQuality
all individuals: 28379
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
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variant carriers: 0

GenotypeQuality
all individuals: 11544
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variant carriers: 0

GenotypeQuality
all individuals: 3438
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variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.832739258748227e-5
allele num: 52182
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 4.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

DP
type: SiteQuality
SIO_000300: 1.253209e6

MQ
type: SiteQuality
SIO_000300: 5.911e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
all individuals: 639
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.734481815695926e-4
allele num: 7314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52804
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.267029e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.118e1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 4.189e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
all individuals: 199
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10275
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7424
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.149161112387957e-4
allele num: 8702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.253e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e-1

FS
type: SiteQuality
SIO_000300: 3.924e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

DP
type: SiteQuality
SIO_000300: 1.289511e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.242e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.91e-1

GenotypeQuality
all individuals: 999
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.829692245764263e-5
allele num: 54654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.837e0

MQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.931e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.816e1

DP
type: SiteQuality
SIO_000300: 1.306116e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
all individuals: 2215
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 523
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variant carriers: 0

GenotypeQuality
all individuals: 574
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.777145903678692e-5
allele num: 56270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.919e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

QD
type: SiteQuality
SIO_000300: 1.393e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 1.33851e6

GenotypeQuality
all individuals: 1525
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2215
bin: 9.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 967
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 463
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variant carriers: 1

GenotypeQuality
all individuals: 349
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.765349715778696e-5
allele num: 56646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.97e-1

QD
type: SiteQuality
SIO_000300: 5.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 1.347958e6

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7672
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 34079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1605
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variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10456
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 2.074688796680498e-3
allele num: 9158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.469142191745374e-5
allele num: 15458
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

DP
type: SiteQuality
SIO_000300: 1.359485e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

GenotypeQuality
all individuals: 1005
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 3.25e1
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GenotypeQuality
all individuals: 34079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7672
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GenotypeQuality
all individuals: 1605
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.74941394632798e-5
allele num: 57162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15458
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.359485e6

QD
type: SiteQuality
SIO_000300: 1.184e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 389
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variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.623007757977083e-5
allele num: 61614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

MQ
type: SiteQuality
SIO_000300: 5.491e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 9.454000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 8.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.036e0

DP
type: SiteQuality
SIO_000300: 1.449147e6

QD
type: SiteQuality
SIO_000300: 1.669e1

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 696
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2241
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variant carriers: 5

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62340
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.359056806002144e-4
allele num: 11196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16056
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.311e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.197e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 1.463962e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.878e-1

QD
type: SiteQuality
SIO_000300: 6.84e0

GenotypeQuality
all individuals: 1196
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 520
bin: 2.75e1
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GenotypeQuality
all individuals: 2243
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 268
bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 405
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GenotypeQuality
all individuals: 735
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.241464928615767e-4
allele num: 16110
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.195600191296031e-4
allele num: 8364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 2.856e0

VQSLOD
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.522e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

DP
type: SiteQuality
SIO_000300: 1.475572e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40501
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1194
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.652989034311992e-4
allele num: 11308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

QD
type: SiteQuality
SIO_000300: 1.572e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 1.491694e6

FS
type: SiteQuality
SIO_000300: 4.681e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

VQSLOD
type: SiteQuality
SIO_000300: 3.09e-1

GenotypeQuality
all individuals: 428
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2249
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5533
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.013171225937183e-4
allele num: 9870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.448e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

DP
type: SiteQuality
SIO_000300: 1.494721e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e0

FS
type: SiteQuality
SIO_000300: 1.289e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 4321
bin: 6.75e1
variant carriers: 38

GenotypeQuality
all individuals: 405
bin: 4.75e1
variant carriers: 25

GenotypeQuality
all individuals: 272
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 360
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1657
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 13640
bin: 9.75e1
variant carriers: 11867

GenotypeQuality
all individuals: 335
bin: 8.75e1
variant carriers: 49

GenotypeQuality
all individuals: 469
bin: 5.75e1
variant carriers: 27

GenotypeQuality
all individuals: 408
bin: 9.25e1
variant carriers: 46

GenotypeQuality
all individuals: 1522
bin: 7.75e1
variant carriers: 40

South Asian
type: Population
allele count: 1537
allele frequency: 9.423666462293072e-2
allele num: 16310
num of homozygotes: 87

Latino
type: Population
allele count: 1290
allele frequency: 1.134963927503079e-1
allele num: 11366
num of homozygotes: 77

African
type: Population
allele count: 416
allele frequency: 4.180904522613065e-2
allele num: 9950
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 8932
allele frequency: 1.383133574901669e-1
allele num: 64578
num of homozygotes: 645

European (Finnish)
type: Population
allele count: 905
allele frequency: 1.380414887126296e-1
allele num: 6556
num of homozygotes: 59

Other
type: Population
allele count: 109
allele frequency: 1.233031674208145e-1
allele num: 884
num of homozygotes: 9

East Asian
type: Population
allele count: 3
allele frequency: 3.536901674133459e-4
allele num: 8482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.46e-2

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.835451e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.749e0

QD
type: SiteQuality
SIO_000300: 1.471e1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39031
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
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variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.449479485609308e-4
allele num: 16330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64842
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

DP
type: SiteQuality
SIO_000300: 1.662102e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.273e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 9.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.23e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 290
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39833
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.222195062331948e-3
allele num: 16364
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.376e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

DP
type: SiteQuality
SIO_000300: 1.668776e6

MQ
type: SiteQuality
SIO_000300: 5.921e1

FS
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53298994358597e-5
allele num: 65232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

DP
type: SiteQuality
SIO_000300: 1.669877e6

FS
type: SiteQuality
SIO_000300: 2.526e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.175e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 1.742e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.681063e6

MQ
type: SiteQuality
SIO_000300: 5.902e1

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 41006
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.520218911523259e-4
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525087692542321e-5
allele num: 65570
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.257907542579075e-4
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.962143853357243e-5
allele num: 10038
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.742e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.175e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

DP
type: SiteQuality
SIO_000300: 1.681063e6

GenotypeQuality
all individuals: 2323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4163
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6141
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523647001462701e-5
allele num: 65632
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

DP
type: SiteQuality
SIO_000300: 1.681712e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.379e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 2.702e1

GenotypeQuality
all individuals: 867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.154e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 4.894e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.346e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.355e0

MQ
type: SiteQuality
SIO_000300: 5.792e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 1.684649e6

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518833535844471e-5
allele num: 65840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.923e1

DP
type: SiteQuality
SIO_000300: 1.685631e6

QD
type: SiteQuality
SIO_000300: 2.572e1

VQSLOD
type: SiteQuality
SIO_000300: -2.328e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 141
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517773123273533e-5
allele num: 65886
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.687234e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.046e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.232e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
SIO_000300: 1.273e1

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517773123273533e-5
allele num: 65886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.273e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

DP
type: SiteQuality
SIO_000300: 1.687234e6

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: -1.046e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.232e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.08e-1

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 816
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516438189979376e-5
allele num: 65944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.836e1

QD
type: SiteQuality
SIO_000300: 9.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.688417e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.902e0

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.601e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.548211036992117e-5
allele num: 65960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.821e0

DP
type: SiteQuality
SIO_000300: 1.68854e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.66e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.846e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65942
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.42e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.687726e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

FS
type: SiteQuality
SIO_000300: 1.1931e1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.00160128102482e-4
allele num: 9992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.019e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.234e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.004419445560466e-4
allele num: 9956
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517634917744187e-5
allele num: 65892
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.685544e6

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.684e1

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1461
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737015806843842e-4
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65904
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.019292604501608e-4
allele num: 9952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.095e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

DP
type: SiteQuality
SIO_000300: 1.68571e6

MQ
type: SiteQuality
SIO_000300: 5.902e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5920
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1844
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 514
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38670
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2193
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 32
allele frequency: 1.944106925880923e-3
allele num: 16460
num of homozygotes: 2

Other
type: Population
allele count: 10
allele frequency: 1.116071428571429e-2
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1014
allele frequency: 1.542580704049655e-2
allele num: 65734
num of homozygotes: 6

Latino
type: Population
allele count: 71
allele frequency: 6.173913043478261e-3
allele num: 11500
num of homozygotes: 1

African
type: Population
allele count: 11
allele frequency: 1.124744376278119e-3
allele num: 9780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 79
allele frequency: 1.198786039453718e-2
allele num: 6590
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 1.271e0

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 1.694665e6

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

QD
type: SiteQuality
SIO_000300: 1.326e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

GenotypeQuality
all individuals: 6070
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4261
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 549
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1451
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522116350573838e-5
allele num: 65698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.541e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.52e-1

DP
type: SiteQuality
SIO_000300: 1.667788e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 552
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1594
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.617e0

MQRankSum
type: SiteQuality
SIO_000300: 2.06e0

DP
type: SiteQuality
SIO_000300: 1.64745e6

MQ
type: SiteQuality
SIO_000300: 5.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 3.329e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.58e0

QD
type: SiteQuality
SIO_000300: 1.297e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

GenotypeQuality
all individuals: 279
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4336
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5879
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2768
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2001
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.272037170342255e-5
allele num: 61124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.323381e6

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

FS
type: SiteQuality
SIO_000300: 3.089e0

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.287e1

GenotypeQuality
all individuals: 307
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5052
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627869119322807e-5
allele num: 61430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15282
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.061e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

FS
type: SiteQuality
SIO_000300: 5.51e0

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 1.357794e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

GenotypeQuality
all individuals: 268
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3747
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4257
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.620850622406639e-5
allele num: 61696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.097e0

DP
type: SiteQuality
SIO_000300: 1.399658e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
all individuals: 662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10914
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.780082987551867e-4
allele num: 15424
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 8.186999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

DP
type: SiteQuality
SIO_000300: 1.408398e6

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.601742696053306e-5
allele num: 62432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

QD
type: SiteQuality
SIO_000300: 1.562e1

VQSLOD
type: SiteQuality
SIO_000300: -4.805e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.462626e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3645
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.986446083316723e-4
allele num: 10034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

DP
type: SiteQuality
SIO_000300: 1.485201e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.32e0

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.632e1

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42980
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.335529650278763e-5
allele num: 15784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

DP
type: SiteQuality
SIO_000300: 1.50514e6

MQ
type: SiteQuality
SIO_000300: 5.074e1

VQSLOD
type: SiteQuality
SIO_000300: 7.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.681e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 4.39e0

GenotypeQuality
all individuals: 44559
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.139224611520955e-5
allele num: 63710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.815e1

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 1.399e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.25e0

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.516887e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3901
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 269
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64438
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 3.213e0

DP
type: SiteQuality
SIO_000300: 1.541839e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 1.519e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1534
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
all individuals: 201
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.813542688910697e-5
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.379e0

DP
type: SiteQuality
SIO_000300: 1.56078e6

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.019e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.03e-1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4113
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 266
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variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515472979116782e-5
allele num: 65986
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.69e0

DP
type: SiteQuality
SIO_000300: 1.587783e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.752291788570315e-5
allele num: 10254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65986
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 8.69e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.587783e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 717
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 267
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GenotypeQuality
all individuals: 4139
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variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66088
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

QD
type: SiteQuality
SIO_000300: 1.085e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.589743e6

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50474
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GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 267
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variant carriers: 0

GenotypeQuality
all individuals: 205
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variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510437120502674e-5
allele num: 66206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.564e0

QD
type: SiteQuality
SIO_000300: 8.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.711e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.592865e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 737
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GenotypeQuality
all individuals: 419
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GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509980974239725e-5
allele num: 66226
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.07e1

DP
type: SiteQuality
SIO_000300: 1.593083e6

VQSLOD
type: SiteQuality
SIO_000300: -2.156e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQ
type: SiteQuality
SIO_000300: 5.835e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50934283213089e-5
allele num: 66254
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.594555e6

QD
type: SiteQuality
SIO_000300: 9.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.2e-2

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

FS
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 410
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GenotypeQuality
all individuals: 203
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variant carriers: 0

GenotypeQuality
all individuals: 40
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GenotypeQuality
all individuals: 89
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
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Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

VQSLOD
type: SiteQuality
SIO_000300: -1.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

DP
type: SiteQuality
SIO_000300: 1.594555e6

QD
type: SiteQuality
SIO_000300: 9.02e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50542
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.057424068594892e-5
allele num: 66244
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.146e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.967e0

FS
type: SiteQuality
SIO_000300: 2.469e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

DP
type: SiteQuality
SIO_000300: 1.594463e6

VQSLOD
type: SiteQuality
SIO_000300: 7.67e-1