10-81925790-ACACG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925790
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925786
    reference: chr 10
allele count: 1
allele frequency: 1.074275401241862e-5
allele num: 93086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+46_858+49delCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+46_858+49delCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+46_858+49delCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+46_858+49delCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+46_858+49delCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+46_759+49delCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+46_858+49delCGTG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: ACACG
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

10-81925790-A-ATGCGCGCGTGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925790
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925802
    reference: chr 10
allele count: 5
allele frequency: 5.371377006209312e-5
allele num: 93086
alternate allele: ATGCGCGCGTGCG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3813
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5884
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ

10-81925792-A-ACG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925792
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
allele count: 17
allele frequency: 1.702178788849728e-4
allele num: 99872
alternate allele: ACG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+46_858+47dupCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+46_759+47dupCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+46_858+47dupCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+46_858+47dupCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+46_858+47dupCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+46_858+47dupCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+46_858+47dupCG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 2.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-81925792-A-ATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925792
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
allele count: 664
allele frequency: 6.648510092918936e-3
allele num: 99872
alternate allele: ATG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+47_858+48insCA
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+47_858+48insCA
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+47_858+48insCA
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+47_759+48insCA
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+47_858+48insCA
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+47_858+48insCA
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+47_858+48insCA
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 1.25e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 7.5e0
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 3.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 1.75e1
  variant carriers: 204
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 8.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 9.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 4.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 7.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 5.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 1.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 6.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 4.75e1
  variant carriers: 26
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

10-81925792-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925792
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925792
    reference: chr 10
allele count: 4
allele frequency: 4.005126561999359e-5
allele num: 99872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+48T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+48T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+48T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+48T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+48T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+48T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+48T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22450
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-81925792-ACG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925792
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925790
    reference: chr 10
allele count: 22358
allele frequency: 2.238665491829542e-1
allele num: 99872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+46_858+47delCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+46_858+47delCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+46_759+47delCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+46_858+47delCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+46_858+47delCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+46_858+47delCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+46_858+47delCG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 1.25e1
  variant carriers: 3915
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.75e1
  variant carriers: 3850
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 576
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 1019
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.25e1
  variant carriers: 5348
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.75e1
  variant carriers: 295
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 7.5e0
  variant carriers: 1764
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 3.25e1
  variant carriers: 2182
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 1.75e1
  variant carriers: 5115
genotype quality: GenotypeQuality
  all individuals: 22450
  bin: 9.75e1
  variant carriers: 15429
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 8.75e1
  variant carriers: 435
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 5.75e1
  variant carriers: 522
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 4.75e1
  variant carriers: 520
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 2.25e1
  variant carriers: 539
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 590
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 2.5e0
  variant carriers: 431
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 6.75e1
  variant carriers: 428
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 1.25e1
  variant carriers: 547
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 6.25e1
  variant carriers: 464
num of homozygotes: 982
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: ACG
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

10-81925792-ACGCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925792
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925788
    reference: chr 10
allele count: 198
allele frequency: 1.982537648189683e-3
allele num: 99872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+44_858+47delCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+44_858+47delCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+44_858+47delCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+44_759+47delCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+44_858+47delCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+44_858+47delCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+44_858+47delCGCG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 1.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 1.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 7.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 3.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 22450
  bin: 9.75e1
  variant carriers: 150
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: ACGCG
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-81925793-C-CGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925793
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925795
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 34200
alternate allele: CGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+46_858+47insAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+46_858+47insAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+46_759+47insAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+46_858+47insAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+46_858+47insAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+46_858+47insAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+46_858+47insAC
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

10-81925793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925793
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925793
    reference: chr 10
allele count: 13200
allele frequency: 3.859649122807017e-1
allele num: 34200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+47G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+47G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+47G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+47G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+47G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+47G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+47G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 4.25e1
  variant carriers: 764
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 3.75e1
  variant carriers: 1299
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 1.75e1
  variant carriers: 2026
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.5e0
  variant carriers: 364
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 2.75e1
  variant carriers: 2515
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 2.25e1
  variant carriers: 2465
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 3.25e1
  variant carriers: 1984
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.25e1
  variant carriers: 1159
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 4.75e1
  variant carriers: 442
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 7.5e0
  variant carriers: 150
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.25e1
  variant carriers: 221
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 6.25e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.25e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 4.25e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 3.25e1
  variant carriers: 192
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 7.75e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 1.25e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.75e1
  variant carriers: 173
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 2.5e0
  variant carriers: 153
num of homozygotes: 273
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-81925794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
allele count: 545
allele frequency: 3.532080362929359e-2
allele num: 15430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+46C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+46C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+46C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+46C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+46C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+46C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+46C>T
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 2.5e0
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 1.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 32
num of homozygotes: 3
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

10-81925794-GCGCGCACA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925786
    reference: chr 10
allele count: 57
allele frequency: 3.694102397926118e-3
allele num: 15430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 3
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: GCGCGCACA
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

10-81925794-G-GCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925796
    reference: chr 10
allele count: 12
allele frequency: 7.777057679844458e-4
allele num: 15430
alternate allele: GCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+45_759+46insTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+45_858+46insTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+45_858+46insTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+45_858+46insTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+45_858+46insTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+45_858+46insTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+45_858+46insTG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

10-81925794-G-GCACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925798
    reference: chr 10
allele count: 11
allele frequency: 7.12896953985742e-4
allele num: 15430
alternate allele: GCACA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+45_858+46insTGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+45_858+46insTGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+45_858+46insTGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+45_759+46insTGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+45_858+46insTGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+45_858+46insTGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+45_858+46insTGTG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-81925794-GCGCGCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925788
    reference: chr 10
allele count: 305
allele frequency: 1.976668826960467e-2
allele num: 15430
alternate allele: G
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 6.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 9.75e1
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 9
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2410
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 4
  allele frequency: 3.92156862745098e-2
  allele num: 102
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 534
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 5
  allele frequency: 5.784359093012494e-4
  allele num: 8644
  num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
reference allele: GCGCGCA
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-81925794-GCGCGCACACA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925784
    reference: chr 10
allele count: 13
allele frequency: 8.425145819831498e-4
allele num: 15430
alternate allele: G
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8644
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 534
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 102
  num of homozygotes: 0
population: African
  type: Population
  allele count: 13
  allele frequency: 6.143667296786389e-3
  allele num: 2116
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
reference allele: GCGCGCACACA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum

10-81925795-C-CATGCGCGCGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925795
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925805
    reference: chr 10
allele count: 8
allele frequency: 9.314889851427506e-5
allele num: 85884
alternate allele: CATGCGCGCGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 9696
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7413
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9670
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7839
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.75e1
  variant carriers: 3
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-81925795-C-CGCGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925795
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925799
    reference: chr 10
allele count: 105
allele frequency: 1.22257929299986e-3
allele num: 85884
alternate allele: CGCGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+44_858+45insACGC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+44_858+45insACGC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+44_858+45insACGC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+44_858+45insACGC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+44_759+45insACGC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+44_858+45insACGC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+44_858+45insACGC
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9670
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9696
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7413
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7839
  bin: 2.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 6.75e1
  variant carriers: 5
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

10-81925795-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925795
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925795
    reference: chr 10
allele count: 48363
allele frequency: 5.631200223557357e-1
allele num: 85884
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+45G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+45G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+45G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+45G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+45G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+45G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+45G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7413
  bin: 1.75e1
  variant carriers: 5928
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 332
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 1474
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 4.25e1
  variant carriers: 2054
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 3.75e1
  variant carriers: 3702
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 1.25e1
  variant carriers: 3575
genotype depth: GenotypeDepth
  all individuals: 9670
  bin: 2.75e1
  variant carriers: 7409
genotype depth: GenotypeDepth
  all individuals: 9696
  bin: 2.25e1
  variant carriers: 7588
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 411
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 3.25e1
  variant carriers: 5847
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 5.25e1
  variant carriers: 739
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.75e1
  variant carriers: 1097
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 31480
  bin: 9.75e1
  variant carriers: 30827
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.25e1
  variant carriers: 409
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 4.75e1
  variant carriers: 609
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 5.25e1
  variant carriers: 628
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 7.25e1
  variant carriers: 668
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.75e1
  variant carriers: 425
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 6.25e1
  variant carriers: 697
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.5e0
  variant carriers: 379
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 8.75e1
  variant carriers: 682
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 9.25e1
  variant carriers: 687
num of homozygotes: 9831
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-81925797-C-CGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925797
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925801
    reference: chr 10
allele count: 1
allele frequency: 1.776577600909608e-5
allele num: 56288
alternate allele: CGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+42_858+43insACAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+42_858+43insACAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+42_858+43insACAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+42_858+43insACAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+42_759+43insACAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+42_858+43insACAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+42_858+43insACAC
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5659
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

10-81925797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925797
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925797
    reference: chr 10
allele count: 19
allele frequency: 3.375497441728254e-4
allele num: 56288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+43G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+43G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+43G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+43G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+43G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+43G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+43G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5510
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5659
  bin: 2.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 9.25e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

10-81925800-A-ACACACGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925800
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925808
    reference: chr 10
allele count: 9
allele frequency: 6.522684447021307e-4
allele num: 13798
alternate allele: ACACACGCG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

10-81925800-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925800
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925800
    reference: chr 10
allele count: 57
allele frequency: 4.131033483113495e-3
allele num: 13798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+40T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+40T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+40T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+40T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+40T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+40T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+40T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 4.25e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

10-81925802-A-ACACGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925802
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925808
    reference: chr 10
allele count: 51
allele frequency: 1.810436634717785e-3
allele num: 28170
alternate allele: ACACGCG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+37_858+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+37_858+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+37_858+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+37_858+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+37_858+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+37_858+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+37_759+38insCGCGTG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3192
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

10-81925802-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925802
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925802
    reference: chr 10
allele count: 4
allele frequency: 1.419950301739439e-4
allele num: 28170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+38T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+38T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+38T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+38T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+38T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+38T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+38T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum

10-81925804-A-ACG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925804
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925806
    reference: chr 10
allele count: 4
allele frequency: 1.045751633986928e-4
allele num: 38250
alternate allele: ACG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+35_858+36insCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+35_858+36insCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+35_858+36insCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+35_759+36insCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+35_858+36insCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+35_858+36insCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+35_858+36insCG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

10-81925804-A-ACGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925804
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925808
    reference: chr 10
allele count: 2
allele frequency: 5.22875816993464e-5
allele num: 38250
alternate allele: ACGCG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+35_858+36insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+35_858+36insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+35_858+36insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+35_759+36insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+35_858+36insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+35_858+36insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+35_858+36insCGCG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

10-81925804-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925804
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925804
    reference: chr 10
allele count: 1
allele frequency: 2.61437908496732e-5
allele num: 38250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+36T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+36T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+36T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+36T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+36T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+36T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+36T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

10-81925806-A-ACGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925806
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925810
    reference: chr 10
allele count: 1
allele frequency: 2.378913312398896e-5
allele num: 42036
alternate allele: ACGCG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+33_858+34insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+33_858+34insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+33_858+34insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+33_858+34insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+33_858+34insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+33_858+34insCGCG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+33_759+34insCGCG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

10-81925806-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925806
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925806
    reference: chr 10
allele count: 9
allele frequency: 2.141021981159007e-4
allele num: 42036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+34T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+34T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+34T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+34T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+34T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+34T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+34T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

10-81925807-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925807
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925807
    reference: chr 10
allele count: 4
allele frequency: 9.790483649892304e-5
allele num: 40856
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+33G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+33G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+33G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+33G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+33G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+33G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+33G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-81925808-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925808
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925808
    reference: chr 10
allele count: 5
allele frequency: 1.147262631361571e-4
allele num: 43582
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+32T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+32T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+32T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+32T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+32T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+32T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+32T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

10-81925810-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925810
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925810
    reference: chr 10
allele count: 4
allele frequency: 5.246314464088978e-5
allele num: 76244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+30T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+30T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+30T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+30T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+30T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+30T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+30T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

10-81925811-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925811
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925811
    reference: chr 10
allele count: 29
allele frequency: 2.724232517942359e-4
allele num: 106452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+29G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+29G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+29G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+29G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+29G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+29G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+29G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12059
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19197
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3333
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

10-81925812-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925812
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925812
    reference: chr 10
allele count: 339
allele frequency: 2.929181211765113e-3
allele num: 115732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+28T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+28T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+28T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+28T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+28T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+28T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+28T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8621
  bin: 2.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 2.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13414
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 6999
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 3.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23030
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

10-81925813-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925813
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925813
    reference: chr 10
allele count: 4
allele frequency: 3.359199166918607e-5
allele num: 119076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+27G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+27G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+27G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+27G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+27G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+27G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+27G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11009
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3164
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

10-81925814-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925814
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925814
    reference: chr 10
allele count: 4
allele frequency: 3.36671997306624e-5
allele num: 118810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+26T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+26T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+26T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+26T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+26T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+26T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+26T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13961
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25736
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-81925819-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925819
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925819
    reference: chr 10
allele count: 2
allele frequency: 1.672408602869853e-5
allele num: 119588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+21G>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+21G>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+21G>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+21G>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+21G>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+21G>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+21G>T
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9230
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

10-81925825-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925825
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925825
    reference: chr 10
allele count: 1
allele frequency: 8.318913882603488e-6
allele num: 120208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+15G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+15G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+15G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+15G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+15G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+15G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+15G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15378
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-81925830-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925830
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925830
    reference: chr 10
allele count: 1
allele frequency: 8.423890152472412e-6
allele num: 118710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+10T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+10T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+10T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+10T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+10T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+10T>C
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+10T>C
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3258
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

10-81925831-C-CACACGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925831
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925837
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 116076
alternate allele: CACACGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+8_858+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+8_858+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+8_858+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+8_858+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+8_759+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+8_858+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+8_858+9insACGTGT
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

10-81925831-CGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925831
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925829
    reference: chr 10
allele count: 1063
allele frequency: 9.157793169992073e-3
allele num: 116076
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+7_759+8delAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+7_858+8delAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+7_858+8delAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+7_858+8delAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+7_858+8delAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+7_858+8delAC
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+7_858+8delAC
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 2.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 15120
  bin: 3.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 4.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 4.25e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 5.25e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 3.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 6.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 4.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 5.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 7.5e0
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 28619
  bin: 6.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 5.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.75e1
  variant carriers: 68
hgvs: c.858+7_858+8delAC
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: CGT
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-81925831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925831
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925831
    reference: chr 10
allele count: 1
allele frequency: 8.615045315138358e-6
allele num: 116076
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+9G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+9G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+9G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+9G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+9G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+9G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+9G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

10-81925832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925832
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925832
    reference: chr 10
allele count: 24
allele frequency: 2.506946330457309e-4
allele num: 95734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+8C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+8C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+8C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+8C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+8C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+8C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+8C>T
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13769
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10191
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6981
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 4.25e1
  variant carriers: 2
hgvs: c.858+8C>T
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

10-81925833-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925833
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925833
    reference: chr 10
allele count: 18
allele frequency: 1.844678103670909e-4
allele num: 97578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+7A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+7A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+7A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+7A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+7A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+7A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+7A>G
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 2
hgvs: c.858+7A>G
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

10-81925833-T-TACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925833
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925837
    reference: chr 10
allele count: 3
allele frequency: 3.074463506118183e-5
allele num: 97578
alternate allele: TACAC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+3_858+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+3_858+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+3_858+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+3_858+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+3_858+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+3_858+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+3_759+6dupGTGT
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5173
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
hgvs: c.858+3_858+6dupGTGT
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

10-81925833-T-TACACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925833
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925839
    reference: chr 10
allele count: 5
allele frequency: 5.124105843530304e-5
allele num: 97578
alternate allele: TACACAC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+1_858+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+1_858+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+1_858+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+1_858+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+1_759+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+1_858+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+1_858+6dupGTGTGT
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26368
  bin: 6.25e1
  variant carriers: 0
hgvs: c.858+1_858+6dupGTGTGT
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

10-81925833-T-TACACACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925833
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925841
    reference: chr 10
allele count: 4
allele frequency: 4.099284674824243e-5
allele num: 97578
alternate allele: TACACACAC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858+6_858+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858+6_858+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759+6_759+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858+6_858+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858+6_858+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858+6_858+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858+6_858+7insGTGTGTGT
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5173
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
hgvs: c.858+6_858+7insGTGTGTGT
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

10-81925833-T-TACACACACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925833
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925843
    reference: chr 10
allele count: 4
allele frequency: 4.099284674824243e-5
allele num: 97578
alternate allele: TACACACACAC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5173
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26368
  bin: 6.25e1
  variant carriers: 1
hgvs: c.858+6_858+7insGTGTGTGTGT
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/10-81925839-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925840
    reference: chr 10
allele count: 100
allele frequency: 8.282396594278521e-4
allele num: 120738
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858_858+1insT
  hgvsp: ENSP00000353827.4:p.Gly287TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858_858+1insT
  hgvsp: ENSP00000404412.2:p.Gly287TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858_858+1insT
  hgvsp: ENSP00000441748.1:p.Gly287TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759_759+1insT
  hgvsp: ENSP00000441400.1:p.Gly254TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858_858+1insT
  hgvsp: ENSP00000361305.3:p.Gly287TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858_858+1insT
  hgvsp: ENSP00000265447.4:p.Gly287TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858_858+1insT
  hgvsp: ENSP00000398610.1:p.Gly287TrpfsTer5
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13171
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18831
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 9.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 10648
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 4
hgvs: p.Gly287TrpfsTer5
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

http://identifiers.org/exac.variant/10-81925839-C-CACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925842
    reference: chr 10
allele count: 78
allele frequency: 6.460269343537246e-4
allele num: 120738
alternate allele: CACA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858_858+1insTGT
  hgvsp: ENSP00000265447.4:p.Lys286_Gly287insCys
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858_858+1insTGT
  hgvsp: ENSP00000353827.4:p.Lys286_Gly287insCys
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858_858+1insTGT
  hgvsp: ENSP00000398610.1:p.Lys286_Gly287insCys
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858_858+1insTGT
  hgvsp: ENSP00000404412.2:p.Lys286_Gly287insCys
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858_858+1insTGT
  hgvsp: ENSP00000441748.1:p.Lys286_Gly287insCys
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858_858+1insTGT
  hgvsp: ENSP00000361305.3:p.Lys286_Gly287insCys
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759_759+1insTGT
  hgvsp: ENSP00000441400.1:p.Lys253_Gly254insCys
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13171
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18831
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 10648
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 4
hgvs: p.Lys286_Gly287insCys
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/10-81925839-C-CACACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925844
    reference: chr 10
allele count: 27
allele frequency: 2.2362470804552e-4
allele num: 120738
alternate allele: CACACA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858_858+1insTGTGT
  hgvsp: ENSP00000265447.4:p.Gly287CysfsTer11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858_858+1insTGTGT
  hgvsp: ENSP00000398610.1:p.Gly287CysfsTer11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858_858+1insTGTGT
  hgvsp: ENSP00000441748.1:p.Gly287CysfsTer11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858_858+1insTGTGT
  hgvsp: ENSP00000361305.3:p.Gly287CysfsTer11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858_858+1insTGTGT
  hgvsp: ENSP00000353827.4:p.Gly287CysfsTer11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759_759+1insTGTGT
  hgvsp: ENSP00000441400.1:p.Gly254CysfsTer11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858_858+1insTGTGT
  hgvsp: ENSP00000404412.2:p.Gly287CysfsTer11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18831
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 4
hgvs: p.Gly287CysfsTer11
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-81925839-C-CACACACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925846
    reference: chr 10
allele count: 14
allele frequency: 1.159535523198993e-4
allele num: 120738
alternate allele: CACACACA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858_858+1insTGTGTGT
  hgvsp: ENSP00000398610.1:p.Gly287CysfsTer7
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858_858+1insTGTGTGT
  hgvsp: ENSP00000361305.3:p.Gly287CysfsTer7
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858_858+1insTGTGTGT
  hgvsp: ENSP00000265447.4:p.Gly287CysfsTer7
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759_759+1insTGTGTGT
  hgvsp: ENSP00000441400.1:p.Gly254CysfsTer7
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858_858+1insTGTGTGT
  hgvsp: ENSP00000353827.4:p.Gly287CysfsTer7
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858_858+1insTGTGTGT
  hgvsp: ENSP00000441748.1:p.Gly287CysfsTer7
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858_858+1insTGTGTGT
  hgvsp: ENSP00000404412.2:p.Gly287CysfsTer7
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18831
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly287CysfsTer7
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/10-81925839-C-CACACACACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925848
    reference: chr 10
allele count: 4
allele frequency: 3.312958637711408e-5
allele num: 120738
alternate allele: CACACACACA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18831
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10648
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys286_Gly287insCysValCys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/10-81925840-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925840
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925840
    reference: chr 10
allele count: 1
allele frequency: 8.330278897737497e-6
allele num: 120044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.858G>T
  hgvsp: ENSP00000361305.3:p.Lys286Asn
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.858G>T
  hgvsp: ENSP00000441748.1:p.Lys286Asn
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.858G>T
  hgvsp: ENSP00000404412.2:p.Lys286Asn
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.858G>T
  hgvsp: ENSP00000265447.4:p.Lys286Asn
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.858G>T
  hgvsp: ENSP00000398610.1:p.Lys286Asn
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.759G>T
  hgvsp: ENSP00000441400.1:p.Lys253Asn
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.858G>T
  hgvsp: ENSP00000353827.4:p.Lys286Asn
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13246
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11953
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys286Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

10-81925848-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925848
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925848
    reference: chr 10
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.850G>A
  hgvsp: ENSP00000353827.4:p.Ala284Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.850G>A
  hgvsp: ENSP00000441748.1:p.Ala284Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.850G>A
  hgvsp: ENSP00000404412.2:p.Ala284Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.850G>A
  hgvsp: ENSP00000398610.1:p.Ala284Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.850G>A
  hgvsp: ENSP00000265447.4:p.Ala284Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.850G>A
  hgvsp: ENSP00000361305.3:p.Ala284Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.751G>A
  hgvsp: ENSP00000441400.1:p.Ala251Thr
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10740
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala284Thr
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-81925856-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925856
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925856
    reference: chr 10
allele count: 12
allele frequency: 9.913422774436588e-5
allele num: 121048
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.842T>C
  hgvsp: ENSP00000265447.4:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.842T>C
  hgvsp: ENSP00000404412.2:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.743T>C
  hgvsp: ENSP00000441400.1:p.Ile248Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.842T>C
  hgvsp: ENSP00000361305.3:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.842T>C
  hgvsp: ENSP00000441748.1:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.842T>C
  hgvsp: ENSP00000398610.1:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.842T>C
  hgvsp: ENSP00000353827.4:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19225
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile281Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

10-81925866-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925866
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925866
    reference: chr 10
allele count: 363
allele frequency: 2.997176214145351e-3
allele num: 121114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.832A>G
  hgvsp: ENSP00000361305.3:p.Ile278Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.832A>G
  hgvsp: ENSP00000353827.4:p.Ile278Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.832A>G
  hgvsp: ENSP00000441748.1:p.Ile278Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.832A>G
  hgvsp: ENSP00000398610.1:p.Ile278Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.733A>G
  hgvsp: ENSP00000441400.1:p.Ile245Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.832A>G
  hgvsp: ENSP00000265447.4:p.Ile278Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.832A>G
  hgvsp: ENSP00000404412.2:p.Ile278Val
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 13893
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19177
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11877
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 6.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile278Val
num of homozygotes: 1
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD

10-81925876-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925876
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925876
    reference: chr 10
allele count: 2
allele frequency: 1.650655310158133e-5
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.822C>T
  hgvsp: ENST00000438331.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.822C>T
  hgvsp: ENST00000265447.4:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.822C>T
  hgvsp: ENST00000372231.3:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.822C>T
  hgvsp: ENST00000535999.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.822C>T
  hgvsp: ENST00000360615.4:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.723C>T
  hgvsp: ENST00000537102.1:c.723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.822C>T
  hgvsp: ENST00000422982.3:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10752
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val274Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-81925881-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925881
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925881
    reference: chr 10
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.817C>T
  hgvsp: ENSP00000441748.1:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.817C>T
  hgvsp: ENSP00000398610.1:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.817C>T
  hgvsp: ENSP00000265447.4:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.817C>T
  hgvsp: ENSP00000353827.4:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.718C>T
  hgvsp: ENSP00000441400.1:p.Pro240Ser
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.817C>T
  hgvsp: ENSP00000361305.3:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.817C>T
  hgvsp: ENSP00000404412.2:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41914
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro273Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

10-81925895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925895
    reference: chr 10
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.803C>T
  hgvsp: ENSP00000265447.4:p.Ala268Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.803C>T
  hgvsp: ENSP00000398610.1:p.Ala268Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.704C>T
  hgvsp: ENSP00000441400.1:p.Ala235Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.803C>T
  hgvsp: ENSP00000404412.2:p.Ala268Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.803C>T
  hgvsp: ENSP00000361305.3:p.Ala268Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.803C>T
  hgvsp: ENSP00000353827.4:p.Ala268Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.803C>T
  hgvsp: ENSP00000441748.1:p.Ala268Val
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala268Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

10-81925901-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925901
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925901
    reference: chr 10
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.797T>C
  hgvsp: ENSP00000353827.4:p.Ile266Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.797T>C
  hgvsp: ENSP00000441748.1:p.Ile266Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.797T>C
  hgvsp: ENSP00000265447.4:p.Ile266Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.797T>C
  hgvsp: ENSP00000398610.1:p.Ile266Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.797T>C
  hgvsp: ENSP00000404412.2:p.Ile266Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.797T>C
  hgvsp: ENSP00000361305.3:p.Ile266Thr
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.698T>C
  hgvsp: ENSP00000441400.1:p.Ile233Thr
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile266Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

10-81925902-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925902
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925902
    reference: chr 10
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.697A>G
  hgvsp: ENSP00000441400.1:p.Ile233Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.796A>G
  hgvsp: ENSP00000361305.3:p.Ile266Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.796A>G
  hgvsp: ENSP00000398610.1:p.Ile266Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.796A>G
  hgvsp: ENSP00000265447.4:p.Ile266Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.796A>G
  hgvsp: ENSP00000353827.4:p.Ile266Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.796A>G
  hgvsp: ENSP00000441748.1:p.Ile266Val
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.796A>G
  hgvsp: ENSP00000404412.2:p.Ile266Val
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile266Val
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

10-81925903-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925903
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925903
    reference: chr 10
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.696A>T
  hgvsp: ENST00000537102.1:c.696A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.795A>T
  hgvsp: ENST00000422982.3:c.795A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.795A>T
  hgvsp: ENST00000360615.4:c.795A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.795A>T
  hgvsp: ENST00000265447.4:c.795A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.795A>T
  hgvsp: ENST00000535999.1:c.795A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.795A>T
  hgvsp: ENST00000372231.3:c.795A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.795A>T
  hgvsp: ENST00000438331.1:c.795A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr265Thr
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-81925903-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925903
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925903
    reference: chr 10
allele count: 17
allele frequency: 1.403195985208664e-4
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.795A>G
  hgvsp: ENST00000265447.4:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.696A>G
  hgvsp: ENST00000537102.1:c.696A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.795A>G
  hgvsp: ENST00000535999.1:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.795A>G
  hgvsp: ENST00000372231.3:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.795A>G
  hgvsp: ENST00000438331.1:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.795A>G
  hgvsp: ENST00000422982.3:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.795A>G
  hgvsp: ENST00000360615.4:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr265Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-81925924-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925924
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925924
    reference: chr 10
allele count: 7
allele frequency: 5.781588119662355e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.774G>A
  hgvsp: ENST00000360615.4:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.774G>A
  hgvsp: ENST00000535999.1:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.774G>A
  hgvsp: ENST00000422982.3:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.774G>A
  hgvsp: ENST00000265447.4:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.774G>A
  hgvsp: ENST00000438331.1:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.774G>A
  hgvsp: ENST00000372231.3:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.675G>A
  hgvsp: ENST00000537102.1:c.675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10722
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu258Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

10-81925931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925931
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925931
    reference: chr 10
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.767C>T
  hgvsp: ENSP00000441748.1:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.668C>T
  hgvsp: ENSP00000441400.1:p.Ser223Phe
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.767C>T
  hgvsp: ENSP00000361305.3:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.767C>T
  hgvsp: ENSP00000404412.2:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.767C>T
  hgvsp: ENSP00000353827.4:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.767C>T
  hgvsp: ENSP00000265447.4:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.767C>T
  hgvsp: ENSP00000398610.1:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser256Phe
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

10-81925956-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925956
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925956
    reference: chr 10
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.745-3C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.745-3C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.745-3C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.745-3C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.646-3C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.745-3C>T
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.745-3C>T
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
hgvs: c.745-3C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

10-81925960-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925960
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925960
    reference: chr 10
allele count: 297
allele frequency: 2.467843254561771e-3
allele num: 120348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.646-7C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.745-7C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.745-7C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.745-7C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.745-7C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.745-7C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.745-7C>G
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 17950
  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 11761
  bin: 3.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 11218
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 7.25e1
  variant carriers: 1
hgvs: c.745-7C>G
num of homozygotes: 1
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

10-81925961-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925961
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925961
    reference: chr 10
allele count: 1
allele frequency: 8.313934153641504e-6
allele num: 120280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.646-8C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.745-8C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.745-8C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.745-8C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.745-8C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.745-8C>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.745-8C>G
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35853
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 7.75e1
  variant carriers: 0
hgvs: c.745-8C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

10-81925965-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925965
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925965
    reference: chr 10
allele count: 1
allele frequency: 8.336668000533546e-6
allele num: 119952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.745-12A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.745-12A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.745-12A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.745-12A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.745-12A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.646-12A>G
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.745-12A>G
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31378
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

10-81925966-TCAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925966
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925962
    reference: chr 10
allele count: 1
allele frequency: 8.347663488989432e-6
allele num: 119794
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.745-17_745-14delTTTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.745-17_745-14delTTTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.745-17_745-14delTTTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.745-17_745-14delTTTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.646-17_646-14delTTTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.745-17_745-14delTTTG
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.745-17_745-14delTTTG
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6243
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8667
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: TCAAA
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

10-81925971-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 81925971
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 81925971
    reference: chr 10
allele count: 1
allele frequency: 8.521952549768203e-6
allele num: 117344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000398610
  ensembl transcript: ENST00000438331
  gene symbol: ANXA11
  hgvsc: ENST00000438331.1:c.745-18G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000404412
  ensembl transcript: ENST00000422982
  gene symbol: ANXA11
  hgvsc: ENST00000422982.3:c.745-18G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441748
  ensembl transcript: ENST00000535999
  gene symbol: ANXA11
  hgvsc: ENST00000535999.1:c.745-18G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000441400
  ensembl transcript: ENST00000537102
  gene symbol: ANXA11
  hgvsc: ENST00000537102.1:c.646-18G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000361305
  ensembl transcript: ENST00000372231
  gene symbol: ANXA11
  hgvsc: ENST00000372231.3:c.745-18G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000265447
  ensembl transcript: ENST00000265447
  gene symbol: ANXA11
  hgvsc: ENST00000265447.4:c.745-18G>A
  variant of: http://identifiers.org/hgnc/535
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122359
  ensembl protein: ENSP00000353827
  ensembl transcript: ENST00000360615
  gene symbol: ANXA11
  hgvsc: ENST00000360615.4:c.745-18G>A
  variant of: http://identifiers.org/hgnc/535
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 8314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5884
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3813
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 347
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.943634596695821e-5
allele num: 51450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

DP
type: SiteQuality
SIO_000300: 2.061924e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.595e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

QD
type: SiteQuality
SIO_000300: 4.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 4.974e1

GenotypeQuality
all individuals: 2069
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4677
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2478
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.70929287455974e-4
allele num: 7382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.830903790087464e-5
allele num: 51450
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

QD
type: SiteQuality
SIO_000300: 4.82e0

MQRankSum
type: SiteQuality
SIO_000300: -1.595e0

DP
type: SiteQuality
SIO_000300: 2.061924e6

MQ
type: SiteQuality
SIO_000300: 4.974e1

GenotypeQuality
all individuals: 2101
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2534
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1850
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1843
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22450
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2177
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 10
allele frequency: 7.759155803848542e-4
allele num: 12888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.941024999105898e-5
allele num: 55922
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.358695652173913e-4
allele num: 7360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5260
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.036054703688355e-4
allele num: 9652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.521e1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

DP
type: SiteQuality
SIO_000300: 1.560316e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.005e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

GenotypeQuality
all individuals: 3504
bin: 2.5e0
variant carriers: 36

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2038
bin: 5.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1982
bin: 3.75e1
variant carriers: 19

GenotypeQuality
all individuals: 1438
bin: 1.75e1
variant carriers: 25

GenotypeQuality
all individuals: 1876
bin: 8.75e1
variant carriers: 18

GenotypeQuality
all individuals: 1850
bin: 3.25e1
variant carriers: 23

GenotypeQuality
all individuals: 22450
bin: 9.75e1
variant carriers: 387

GenotypeQuality
all individuals: 2534
bin: 6.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1841
bin: 2.25e1
variant carriers: 34

Latino
type: Population
allele count: 89
allele frequency: 9.220886862826357e-3
allele num: 9652
num of homozygotes: 0

African
type: Population
allele count: 120
allele frequency: 1.486620416253717e-2
allele num: 8072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.520912547528517e-3
allele num: 5260
num of homozygotes: 0

East Asian
type: Population
allele count: 17
allele frequency: 2.309782608695652e-3
allele num: 7360
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 6.963788300835654e-3
allele num: 718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 231
allele frequency: 4.130753549586925e-3
allele num: 55922
num of homozygotes: 0

South Asian
type: Population
allele count: 194
allele frequency: 1.505276225946617e-2
allele num: 12888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

MQ
type: SiteQuality
SIO_000300: 5.521e1

DP
type: SiteQuality
SIO_000300: 1.560316e6

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.005e-1

GenotypeQuality
all individuals: 1876
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1438
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2534
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1850
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1843
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.759155803848541e-5
allele num: 12888
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.036054703688355e-4
allele num: 9652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7360
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.477700693756194e-4
allele num: 8072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5260
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.521e1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.005e-1

DP
type: SiteQuality
SIO_000300: 1.560316e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

GenotypeQuality
all individuals: 1982
bin: 3.75e1
variant carriers: 528

GenotypeQuality
all individuals: 1373
bin: 7.5e0
variant carriers: 528

GenotypeQuality
all individuals: 1843
bin: 4.25e1
variant carriers: 492

GenotypeQuality
all individuals: 1438
bin: 1.75e1
variant carriers: 582

GenotypeQuality
all individuals: 2023
bin: 8.25e1
variant carriers: 469

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 512

GenotypeQuality
all individuals: 2143
bin: 5.25e1
variant carriers: 501

GenotypeQuality
all individuals: 2177
bin: 7.75e1
variant carriers: 419

GenotypeQuality
all individuals: 1910
bin: 9.25e1
variant carriers: 473

GenotypeQuality
all individuals: 1850
bin: 3.25e1
variant carriers: 524

Latino
type: Population
allele count: 2270
allele frequency: 2.351844177372565e-1
allele num: 9652
num of homozygotes: 58

European (Non-Finnish)
type: Population
allele count: 13885
allele frequency: 2.482922642251708e-1
allele num: 55922
num of homozygotes: 635

African
type: Population
allele count: 1305
allele frequency: 1.616699702675917e-1
allele num: 8072
num of homozygotes: 92

European (Finnish)
type: Population
allele count: 1251
allele frequency: 2.378326996197719e-1
allele num: 5260
num of homozygotes: 54

South Asian
type: Population
allele count: 2453
allele frequency: 1.903320918684047e-1
allele num: 12888
num of homozygotes: 115

East Asian
type: Population
allele count: 1050
allele frequency: 1.426630434782609e-1
allele num: 7360
num of homozygotes: 22

Other
type: Population
allele count: 144
allele frequency: 2.005571030640668e-1
allele num: 718
num of homozygotes: 6

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.005e-1

MQ
type: SiteQuality
SIO_000300: 5.521e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 1.560316e6

GenotypeQuality
all individuals: 1841
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1723
bin: 2.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1324
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3504
bin: 2.5e0
variant carriers: 47

GenotypeQuality
all individuals: 1982
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2143
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1876
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2534
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 9.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2023
bin: 8.25e1
variant carriers: 2

African
type: Population
allele count: 172
allele frequency: 2.130822596630327e-2
allele num: 8072
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.551831160769708e-4
allele num: 12888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.78820499982118e-4
allele num: 55922
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 1.13966017405719e-3
allele num: 9652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7360
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.392757660167131e-3
allele num: 718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.802281368821293e-4
allele num: 5260
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.521e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.005e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.560316e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

GenotypeQuality
all individuals: 356
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10931
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.654e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.23e-1

DP
type: SiteQuality
SIO_000300: 8.33582e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.069e0

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.277e-1

GenotypeQuality
all individuals: 459
bin: 8.25e1
variant carriers: 273

GenotypeQuality
all individuals: 350
bin: 5.75e1
variant carriers: 238

GenotypeQuality
all individuals: 416
bin: 6.75e1
variant carriers: 252

GenotypeQuality
all individuals: 421
bin: 8.75e1
variant carriers: 252

GenotypeQuality
all individuals: 492
bin: 2.75e1
variant carriers: 209

GenotypeQuality
all individuals: 10931
bin: 9.75e1
variant carriers: 9880

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 174

GenotypeQuality
all individuals: 393
bin: 7.25e1
variant carriers: 247

GenotypeQuality
all individuals: 407
bin: 4.75e1
variant carriers: 219

GenotypeQuality
all individuals: 428
bin: 9.25e1
variant carriers: 260

South Asian
type: Population
allele count: 2444
allele frequency: 3.768115942028986e-1
allele num: 6486
num of homozygotes: 43

Latino
type: Population
allele count: 2243
allele frequency: 4.298581832119586e-1
allele num: 5218
num of homozygotes: 16

European (Finnish)
type: Population
allele count: 569
allele frequency: 3.934993084370678e-1
allele num: 1446
num of homozygotes: 10

European (Non-Finnish)
type: Population
allele count: 7445
allele frequency: 4.017808958445764e-1
allele num: 18530
num of homozygotes: 201

Other
type: Population
allele count: 81
allele frequency: 4.090909090909091e-1
allele num: 198
num of homozygotes: 2

African
type: Population
allele count: 316
allele frequency: 1.970074812967581e-1
allele num: 1604
num of homozygotes: 1

East Asian
type: Population
allele count: 102
allele frequency: 1.420612813370473e-1
allele num: 718
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.277e-1

MQ
type: SiteQuality
SIO_000300: 5.654e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.069e0

DP
type: SiteQuality
SIO_000300: 8.33582e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 31

GenotypeQuality
all individuals: 661
bin: 1.25e1
variant carriers: 36

GenotypeQuality
all individuals: 325
bin: 8.75e1
variant carriers: 18

GenotypeQuality
all individuals: 316
bin: 8.25e1
variant carriers: 20

GenotypeQuality
all individuals: 682
bin: 2.25e1
variant carriers: 34

GenotypeQuality
all individuals: 379
bin: 5.25e1
variant carriers: 25

GenotypeQuality
all individuals: 2209
bin: 9.75e1
variant carriers: 231

GenotypeQuality
all individuals: 323
bin: 7.75e1
variant carriers: 16

GenotypeQuality
all individuals: 395
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 344
bin: 6.75e1
variant carriers: 20

European (Finnish)
type: Population
allele count: 69
allele frequency: 8.961038961038961e-2
allele num: 770
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.872659176029963e-3
allele num: 534
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 5.882352941176471e-2
allele num: 102
num of homozygotes: 0

African
type: Population
allele count: 25
allele frequency: 1.181474480151229e-2
allele num: 2116
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 2.693208430913349e-2
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 380
allele frequency: 4.396112910689495e-2
allele num: 8644
num of homozygotes: 3

South Asian
type: Population
allele count: 41
allele frequency: 1.701244813278008e-2
allele num: 2410
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

MQ
type: SiteQuality
SIO_000300: 5.056e1

DP
type: SiteQuality
SIO_000300: 5.70244e5

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 244
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 767
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2809
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 325
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 316
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 2

African
type: Population
allele count: 54
allele frequency: 2.551984877126654e-2
allele num: 2116
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.34192037470726e-3
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.149377593360996e-4
allele num: 2410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.056e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

DP
type: SiteQuality
SIO_000300: 5.70244e5

QD
type: SiteQuality
SIO_000300: 3.85e0

GenotypeQuality
all individuals: 379
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2209
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 767
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 9.45179584120983e-4
allele num: 2116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.156871818602499e-3
allele num: 8644
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

MQ
type: SiteQuality
SIO_000300: 5.056e1

DP
type: SiteQuality
SIO_000300: 5.70244e5

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

QD
type: SiteQuality
SIO_000300: 3.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2209
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 325
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 1.659751037344398e-3
allele num: 2410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 5.194805194805195e-3
allele num: 770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 9.45179584120983e-4
allele num: 2116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 9.803921568627451e-3
allele num: 102
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.056e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

DP
type: SiteQuality
SIO_000300: 5.70244e5

QD
type: SiteQuality
SIO_000300: 3.85e0

African
type: Population
allele count: 265
allele frequency: 1.252362948960302e-1
allele num: 2116
num of homozygotes: 0

Latino
type: Population
allele count: 31
allele frequency: 3.629976580796253e-2
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

QD
type: SiteQuality
SIO_000300: 3.85e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

MQ
type: SiteQuality
SIO_000300: 5.056e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 5.70244e5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2410
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.889e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

QD
type: SiteQuality
SIO_000300: 3.85e0

MQ
type: SiteQuality
SIO_000300: 5.056e1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 5.70244e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

GenotypeQuality
all individuals: 926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 911
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31480
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 814
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.039717196922437e-4
allele num: 9618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.276541423769201e-4
allele num: 47002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.03334688897926e-4
allele num: 4918
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e-1

QD
type: SiteQuality
SIO_000300: 2.813e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.33e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.891e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.117e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.165e0

DP
type: SiteQuality
SIO_000300: 1.74306e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.85e-1

GenotypeQuality
all individuals: 858
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 31480
bin: 9.75e1
variant carriers: 65

GenotypeQuality
all individuals: 900
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 898
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 811
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 845
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 929
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 814
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 905
bin: 5.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7248
num of homozygotes: 0

African
type: Population
allele count: 56
allele frequency: 1.191996594295445e-2
allele num: 4698
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.949852507374631e-3
allele num: 678
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.412386964681795e-4
allele num: 11722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.03334688897926e-4
allele num: 4918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 5.318922599038339e-4
allele num: 47002
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.767519234768143e-3
allele num: 9618
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.813e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.85e-1

MQ
type: SiteQuality
SIO_000300: 5.33e1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 1.74306e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.891e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.117e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.165e0

GenotypeQuality
all individuals: 858
bin: 8.25e1
variant carriers: 705

GenotypeQuality
all individuals: 7839
bin: 2.5e0
variant carriers: 306

GenotypeQuality
all individuals: 898
bin: 3.25e1
variant carriers: 461

GenotypeQuality
all individuals: 929
bin: 3.75e1
variant carriers: 542

GenotypeQuality
all individuals: 811
bin: 4.25e1
variant carriers: 546

GenotypeQuality
all individuals: 733
bin: 1.25e1
variant carriers: 384

GenotypeQuality
all individuals: 884
bin: 1.75e1
variant carriers: 403

GenotypeQuality
all individuals: 926
bin: 7.75e1
variant carriers: 744

GenotypeQuality
all individuals: 911
bin: 6.75e1
variant carriers: 681

GenotypeQuality
all individuals: 845
bin: 5.75e1
variant carriers: 666

South Asian
type: Population
allele count: 6014
allele frequency: 5.130523801399078e-1
allele num: 11722
num of homozygotes: 1083

Latino
type: Population
allele count: 5545
allele frequency: 5.765231856934914e-1
allele num: 9618
num of homozygotes: 1171

East Asian
type: Population
allele count: 5296
allele frequency: 7.306843267108167e-1
allele num: 7248
num of homozygotes: 1713

Other
type: Population
allele count: 405
allele frequency: 5.973451327433629e-1
allele num: 678
num of homozygotes: 93

African
type: Population
allele count: 2046
allele frequency: 4.355044699872286e-1
allele num: 4698
num of homozygotes: 203

European (Non-Finnish)
type: Population
allele count: 26149
allele frequency: 5.563380281690141e-1
allele num: 47002
num of homozygotes: 4959

European (Finnish)
type: Population
allele count: 2908
allele frequency: 5.912972753151687e-1
allele num: 4918
num of homozygotes: 609

MQ
type: SiteQuality
SIO_000300: 5.33e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.165e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.117e0

DP
type: SiteQuality
SIO_000300: 1.74306e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.891e-1

QD
type: SiteQuality
SIO_000300: 2.813e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

GenotypeQuality
all individuals: 1360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11555
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.474635163307853e-4
allele num: 2878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.042e0

VQSLOD
type: SiteQuality
SIO_000300: 8.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 5.267e1

DP
type: SiteQuality
SIO_000300: 9.54044e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.63e-1

FS
type: SiteQuality
SIO_000300: 2.647e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.85e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.83e0

GenotypeQuality
all individuals: 456
bin: 1.75e1
variant carriers: 10

GenotypeQuality
all individuals: 751
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 882
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1025
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1062
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 861
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1474
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 11555
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1604
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 997
bin: 4.75e1
variant carriers: 2

African
type: Population
allele count: 3
allele frequency: 1.091703056768559e-3
allele num: 2748
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.769317753486619e-4
allele num: 5306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2878
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.345765892563922e-4
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.639344262295082e-4
allele num: 6100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 3.627729041619946e-4
allele num: 30322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.267e1

FS
type: SiteQuality
SIO_000300: 2.647e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.63e-1

DP
type: SiteQuality
SIO_000300: 9.54044e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.042e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.85e-2

QD
type: SiteQuality
SIO_000300: 7.83e0

VQSLOD
type: SiteQuality
SIO_000300: 8.37e-1

GenotypeQuality
all individuals: 415
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3835
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 401
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 2.25e1
variant carriers: 3

South Asian
type: Population
allele count: 2
allele frequency: 6.176652254478073e-4
allele num: 3238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.722958827634334e-4
allele num: 5732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.65016501650165e-3
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.750937734433609e-4
allele num: 2666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.18926e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.427e0

MQ
type: SiteQuality
SIO_000300: 5.239e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.429e-1

QD
type: SiteQuality
SIO_000300: 2.68e0

GenotypeQuality
all individuals: 488
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 734
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 580
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 572
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 416
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 85
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 874
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 6.454989532449407e-3
allele num: 5732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.125281320330082e-3
allele num: 2666
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 4.323656578134651e-3
allele num: 3238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.65016501650165e-3
allele num: 606
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.773049645390071e-3
allele num: 1128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.18926e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: -1.427e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.63e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.429e-1

MQ
type: SiteQuality
SIO_000300: 5.239e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.76e-1

GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1229
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1201
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 578
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 1453
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 627
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1090
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 458
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 147
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 3

African
type: Population
allele count: 34
allele frequency: 8.500000000000001e-3
allele num: 4000
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 4.378980891719745e-3
allele num: 2512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.781641168289291e-4
allele num: 14380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1276
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 6.172839506172839e-3
allele num: 162
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.952362358453729e-4
allele num: 5122
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: -5.953000000000001e-1

DP
type: SiteQuality
SIO_000300: 7.01853e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.486e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.29e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.099e1

QD
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 1053
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3192
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1297
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5122
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.5e-4
allele num: 4000
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.392757660167131e-3
allele num: 718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.980891719745223e-4
allele num: 2512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.954102920723227e-5
allele num: 14380
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.01853e5

QD
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: -5.953000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.29e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.099e1

MQRankSum
type: SiteQuality
SIO_000300: -1.486e0

GenotypeQuality
all individuals: 2075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1614
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 4.128819157720892e-4
allele num: 4844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.562057754828839e-5
allele num: 20916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.43e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.362e0

FS
type: SiteQuality
SIO_000300: 2.36e0

DP
type: SiteQuality
SIO_000300: 8.1705e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 2.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQ
type: SiteQuality
SIO_000300: 4.724e1

GenotypeQuality
all individuals: 1770
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 819
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5113
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.78102887741442e-5
allele num: 20916
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.090234857849196e-4
allele num: 3236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.43e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.68e-2

FS
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.362e0

QD
type: SiteQuality
SIO_000300: 2.54e0

DP
type: SiteQuality
SIO_000300: 8.1705e5

MQ
type: SiteQuality
SIO_000300: 4.724e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
all individuals: 1770
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.78102887741442e-5
allele num: 20916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.362e0

FS
type: SiteQuality
SIO_000300: 2.36e0

QD
type: SiteQuality
SIO_000300: 2.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.68e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 4.724e1

DP
type: SiteQuality
SIO_000300: 8.1705e5

GenotypeQuality
all individuals: 947
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3424
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.458576429404901e-4
allele num: 6856
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 4.825e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 6.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.81e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.155e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 8.43219e5

MQ
type: SiteQuality
SIO_000300: 4.712e1

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 315
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 2.25e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 2.920560747663551e-4
allele num: 3424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 996
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 9.433962264150943e-4
allele num: 5300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.1440329218107e-4
allele num: 1944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.599191675982457e-5
allele num: 23258
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 4.825e0

QD
type: SiteQuality
SIO_000300: 6.08e0

MQRankSum
type: SiteQuality
SIO_000300: -1.155e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 4.712e1

DP
type: SiteQuality
SIO_000300: 8.43219e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.81e-2

GenotypeQuality
all individuals: 1152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 464
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.335588994746683e-4
allele num: 22462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.428881650380022e-4
allele num: 1842
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.164e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.47e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.78422e5

MQ
type: SiteQuality
SIO_000300: 5.364e1

QD
type: SiteQuality
SIO_000300: 8.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.333e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 7669
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 865
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.71591526344378e-4
allele num: 3682
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.408847562693716e-4
allele num: 7098
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.556187766714083e-4
allele num: 5624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.159958720330237e-4
allele num: 1938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

MQ
type: SiteQuality
SIO_000300: 4.716e1

VQSLOD
type: SiteQuality
SIO_000300: -9.664e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.98645e5

GenotypeQuality
all individuals: 12737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1885
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.77963125548727e-5
allele num: 11390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.387774594078319e-5
allele num: 41880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3820
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.668801708033093e-4
allele num: 7494
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.337e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.156e0

MQ
type: SiteQuality
SIO_000300: 4.652e1

QD
type: SiteQuality
SIO_000300: 1.077e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

DP
type: SiteQuality
SIO_000300: 1.65207e6

VQSLOD
type: SiteQuality
SIO_000300: -2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 3.703e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 756
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6903
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 2.75e1
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GenotypeQuality
all individuals: 2911
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 1806
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 27
allele frequency: 3.091367071215938e-3
allele num: 8734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.784735812133073e-5
allele num: 10220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.682708487581611e-5
allele num: 59428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14368
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.053e0

MQ
type: SiteQuality
SIO_000300: 5.293e1

MQRankSum
type: SiteQuality
SIO_000300: -9.59e-1

DP
type: SiteQuality
SIO_000300: 2.229688e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.62e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.217e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.578e0

GenotypeQuality
all individuals: 290
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 998
bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1904
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1121
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 9.75e1
variant carriers: 331

GenotypeQuality
all individuals: 2981
bin: 7.25e1
variant carriers: 1

Other
type: Population
allele count: 1
allele frequency: 1.149425287356322e-3
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

African
type: Population
allele count: 321
allele frequency: 3.252279635258359e-2
allele num: 9870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.099937146448774e-4
allele num: 63640
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.91583452211127e-4
allele num: 11216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15402
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.08e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.101e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.157e0

VQSLOD
type: SiteQuality
SIO_000300: -2.319e0

DP
type: SiteQuality
SIO_000300: 2.193088e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQRankSum
type: SiteQuality
SIO_000300: -1.715e0

QD
type: SiteQuality
SIO_000300: 9.32e0

GenotypeQuality
all individuals: 1923
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 3192
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variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65718
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.00962309542903e-4
allele num: 9976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.288e1

MQ
type: SiteQuality
SIO_000300: 5.301e1

VQSLOD
type: SiteQuality
SIO_000300: -1.407e0

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

FS
type: SiteQuality
SIO_000300: 7.726e0

DP
type: SiteQuality
SIO_000300: 2.216476e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.602e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

GenotypeQuality
all individuals: 8955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
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variant carriers: 1

GenotypeQuality
all individuals: 1020
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1077
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variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.988643156007172e-4
allele num: 10038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530128224745234e-5
allele num: 65354
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.577e0

MQ
type: SiteQuality
SIO_000300: 4.971e1

QD
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 2.218861e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.069e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

GenotypeQuality
all individuals: 1204
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
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variant carriers: 0

GenotypeQuality
all individuals: 371
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GenotypeQuality
all individuals: 28715
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
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variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.185056902523504e-5
allele num: 16168
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.803921568627451e-5
allele num: 10200
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.411e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.229679e6

MQ
type: SiteQuality
SIO_000300: 5.368e1

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 341
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
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variant carriers: 0

GenotypeQuality
all individuals: 3275
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variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511761504505049e-5
allele num: 66148
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.236891e6

QD
type: SiteQuality
SIO_000300: 1.906e1

MQ
type: SiteQuality
SIO_000300: 5.102e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

FS
type: SiteQuality
SIO_000300: 1.0472e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.593e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-2

GenotypeQuality
all individuals: 9467
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2899
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variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 179
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GenotypeQuality
all individuals: 732
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.196172248803828e-4
allele num: 8360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.446e0

MQ
type: SiteQuality
SIO_000300: 5.466e1

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

DP
type: SiteQuality
SIO_000300: 2.245799e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.238e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.362e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-2

QD
type: SiteQuality
SIO_000300: 3.3e0

GenotypeQuality
all individuals: 28619
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
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variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4298
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2907
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11080
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.371e0

FS
type: SiteQuality
SIO_000300: 2.0096e1

DP
type: SiteQuality
SIO_000300: 2.294075e6

MQ
type: SiteQuality
SIO_000300: 5.481e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.795e0

QD
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

GenotypeQuality
all individuals: 419
bin: 1.75e1
variant carriers: 84

GenotypeQuality
all individuals: 2907
bin: 7.25e1
variant carriers: 27

GenotypeQuality
all individuals: 420
bin: 1.25e1
variant carriers: 76

GenotypeQuality
all individuals: 1471
bin: 2.25e1
variant carriers: 72

GenotypeQuality
all individuals: 957
bin: 2.75e1
variant carriers: 73

GenotypeQuality
all individuals: 984
bin: 3.25e1
variant carriers: 79

GenotypeQuality
all individuals: 757
bin: 4.25e1
variant carriers: 72

GenotypeQuality
all individuals: 977
bin: 8.75e1
variant carriers: 23

GenotypeQuality
all individuals: 8784
bin: 6.75e1
variant carriers: 28

GenotypeQuality
all individuals: 1127
bin: 9.25e1
variant carriers: 30

GenotypeQuality
all individuals: 4298
bin: 9.75e1
variant carriers: 363

East Asian
type: Population
allele count: 43
allele frequency: 5.200774068698597e-3
allele num: 8268
num of homozygotes: 0

South Asian
type: Population
allele count: 174
allele frequency: 1.125193998965339e-2
allele num: 15464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 465
allele frequency: 7.247958102126068e-3
allele num: 64156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 46
allele frequency: 7.174048658764816e-3
allele num: 6412
num of homozygotes: 0

Latino
type: Population
allele count: 53
allele frequency: 4.783393501805054e-3
allele num: 11080
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.276102088167053e-2
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 271
allele frequency: 2.755745373195038e-2
allele num: 9834
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.294075e6

VQSLOD
type: SiteQuality
SIO_000300: -3.371e0

QD
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 5.481e1

FS
type: SiteQuality
SIO_000300: 2.0096e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.795e0

GenotypeQuality
all individuals: 754
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4298
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 419
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2698
bin: 7.75e1
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GenotypeQuality
all individuals: 1777
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15464
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.025270758122743e-5
allele num: 11080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64156
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.294075e6

VQSLOD
type: SiteQuality
SIO_000300: -3.371e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 2.0096e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.795e0

MQ
type: SiteQuality
SIO_000300: 5.481e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

GenotypeQuality
all individuals: 1262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5781
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 668
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 995
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1943
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 1610
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 454
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24843
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 8.75e1
variant carriers: 1

African
type: Population
allele count: 5
allele frequency: 8.183306055646482e-4
allele num: 6110
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 7.0298769771529e-4
allele num: 11380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.802646284746007e-4
allele num: 55474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.38121546961326e-4
allele num: 7240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.93e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.17e-1

DP
type: SiteQuality
SIO_000300: 2.136927e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.94e-1

QD
type: SiteQuality
SIO_000300: 1.64e0

VQSLOD
type: SiteQuality
SIO_000300: -3.691e0

MQ
type: SiteQuality
SIO_000300: 5.569e1

FS
type: SiteQuality
SIO_000300: 2.018e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26368
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variant carriers: 1

GenotypeQuality
all individuals: 421
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.24506420973996e-4
allele num: 56222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.331667499583542e-4
allele num: 12006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.896094046264695e-4
allele num: 5274
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.358326541700625e-4
allele num: 7362
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.926442612555486e-4
allele num: 6308
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.125951e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.486e0

QD
type: SiteQuality
SIO_000300: 7.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

FS
type: SiteQuality
SIO_000300: 3.2631e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.19e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

MQ
type: SiteQuality
SIO_000300: 5.561e1

GenotypeQuality
all individuals: 1167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 743
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variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5274
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.585288522511097e-4
allele num: 6308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.557326313542741e-5
allele num: 56222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.486e0

MQ
type: SiteQuality
SIO_000300: 5.561e1

QD
type: SiteQuality
SIO_000300: 7.0e-1

DP
type: SiteQuality
SIO_000300: 2.125951e6

FS
type: SiteQuality
SIO_000300: 3.2631e1

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.19e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

GenotypeQuality
all individuals: 421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5173
bin: 2.5e0
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GenotypeQuality
all individuals: 1167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 582
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variant carriers: 0

GenotypeQuality
all individuals: 1979
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.557326313542741e-5
allele num: 56222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.033912324234905e-4
allele num: 9672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.329168748958855e-5
allele num: 12006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.896094046264695e-4
allele num: 5274
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.19e-2

QD
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.486e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

FS
type: SiteQuality
SIO_000300: 3.2631e1

MQ
type: SiteQuality
SIO_000300: 5.561e1

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

DP
type: SiteQuality
SIO_000300: 2.125951e6

GenotypeQuality
all individuals: 26368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7113
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variant carriers: 0

GenotypeQuality
all individuals: 1979
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.778663156771371e-5
allele num: 56222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12006
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.033912324234905e-4
allele num: 9672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.896094046264695e-4
allele num: 5274
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.585288522511097e-4
allele num: 6308
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

QD
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.486e0

FS
type: SiteQuality
SIO_000300: 3.2631e1

DP
type: SiteQuality
SIO_000300: 2.125951e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.19e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

MQ
type: SiteQuality
SIO_000300: 5.561e1

GenotypeQuality
all individuals: 612
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1979
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variant carriers: 2

GenotypeQuality
all individuals: 1027
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
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GenotypeQuality
all individuals: 421
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variant carriers: 0

GenotypeQuality
all individuals: 1098
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variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.329168748958855e-5
allele num: 12006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56222
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.170577045022194e-4
allele num: 6308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.358326541700625e-4
allele num: 7362
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

FS
type: SiteQuality
SIO_000300: 3.2631e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.486e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.19e-2

QD
type: SiteQuality
SIO_000300: 7.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

DP
type: SiteQuality
SIO_000300: 2.125951e6

MQ
type: SiteQuality
SIO_000300: 5.561e1

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

GenotypeQuality
all individuals: 2046
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 571
bin: 9.25e1
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GenotypeQuality
all individuals: 39016
bin: 6.25e1
variant carriers: 5

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 62
allele frequency: 6.039353204753555e-3
allele num: 10266
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.289363678588017e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.560703741640056e-4
allele num: 66388
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.433386056697895e-4
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.466805338880222e-4
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.064281382656155e-4
allele num: 6596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.491e0

QD
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 5.532e1

DP
type: SiteQuality
SIO_000300: 2.128738e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.732e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.51e0

FS
type: SiteQuality
SIO_000300: 1.1184e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 39

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 2

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.644681839294008e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.433386056697895e-4
allele num: 16438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 6.326444538169548e-4
allele num: 66388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.032140691328078e-4
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 2.240405221118254e-3
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.491e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.532e1

DP
type: SiteQuality
SIO_000300: 2.128738e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 1.1184e1

VQSLOD
type: SiteQuality
SIO_000300: -2.51e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

African
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allele count: 11
allele frequency: 1.071498149230469e-3
allele num: 10266
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.054407423028258e-4
allele num: 66388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
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East Asian
type: Population
allele count: 3
allele frequency: 3.483511379470506e-4
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.433386056697895e-4
allele num: 16438
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MQRankSum
type: SiteQuality
SIO_000300: -1.491e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 2.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 1.1184e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
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SIO_000300: -2.51e0

DP
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SIO_000300: 2.128738e6

MQ
type: SiteQuality
SIO_000300: 5.532e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 471
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GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216693028348948e-4
allele num: 16438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.025185274447189e-5
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.870446132865771e-4
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.732e0

VQSLOD
type: SiteQuality
SIO_000300: -2.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1184e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.491e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.532e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.74089226573154e-5
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012592637223595e-5
allele num: 66388
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.732e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

QD
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 5.532e1

FS
type: SiteQuality
SIO_000300: 1.1184e1

DP
type: SiteQuality
SIO_000300: 2.128738e6

MQRankSum
type: SiteQuality
SIO_000300: -1.491e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.51e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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European (Finnish)
type: Population
allele count: 1
allele frequency: 1.526251526251526e-4
allele num: 6552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66198
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10064
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.327e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

QD
type: SiteQuality
SIO_000300: 1.026e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 2.122997e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.105e0

FS
type: SiteQuality
SIO_000300: 1.3752e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.181e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1953
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.77e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

FS
type: SiteQuality
SIO_000300: 1.463e0

VQSLOD
type: SiteQuality
SIO_000300: -1.214e0

DP
type: SiteQuality
SIO_000300: 2.112126e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQ
type: SiteQuality
SIO_000300: 5.158e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.128e0

GenotypeQuality
all individuals: 270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1955
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variant carriers: 12

GenotypeQuality
all individuals: 10746
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.16211504938989e-3
allele num: 10326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66542
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

DP
type: SiteQuality
SIO_000300: 2.114451e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.95e-1

MQ
type: SiteQuality
SIO_000300: 5.714e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.544e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

QD
type: SiteQuality
SIO_000300: 1.455e1

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 201
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variant carriers: 0

South Asian
type: Population
allele count: 41
allele frequency: 2.486958631566177e-3
allele num: 16486
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.772445820433437e-4
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.07648382073023e-3
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 281
allele frequency: 4.220486632622409e-3
allele num: 66580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.210287443267776e-3
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.726e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.127178e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

MQ
type: SiteQuality
SIO_000300: 5.769e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.11e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

GenotypeQuality
all individuals: 1867
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 456
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.835e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -1.858e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.768e0

QD
type: SiteQuality
SIO_000300: 1.317e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.587e0

DP
type: SiteQuality
SIO_000300: 2.113778e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.798e-1

QD
type: SiteQuality
SIO_000300: 2.048e1

FS
type: SiteQuality
SIO_000300: 2.277e0

DP
type: SiteQuality
SIO_000300: 2.114262e6

InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-1

MQ
type: SiteQuality
SIO_000300: 5.559e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 348
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.114202e6

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.76e-1

FS
type: SiteQuality
SIO_000300: 6.559e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.04e-1

MQ
type: SiteQuality
SIO_000300: 5.874e1

VQSLOD
type: SiteQuality
SIO_000300: -2.041e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 196
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

FS
type: SiteQuality
SIO_000300: 8.59e-1

QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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Other
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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FS
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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South Asian
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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MQ
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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allele num: 11560
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African
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Other
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European (Non-Finnish)
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allele frequency: 2.101660311646201e-4
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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DP
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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African
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QD
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ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQ
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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MQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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South Asian
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African
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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Latino
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African
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South Asian
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1636
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65802
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.59e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.958775e6

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

QD
type: SiteQuality
SIO_000300: 9.35e0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0