7-76112194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112194
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112194
    reference: chr 7
allele count: 7
allele frequency: 5.777007510109763e-5
allele num: 121170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.638G>A
  hgvsp: ENSP00000305242.8:p.Arg213His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.638G>A
  hgvsp: ENSP00000390218.2:p.Arg213His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.365G>A
  hgvsp: ENSP00000397648.1:p.Arg122His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.638G>A
  hgvsp: ENSP00000392545.2:p.Arg213His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.638G>A
  hgvsp: ENSP00000322885.5:p.Arg213His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.638G>A
  hgvsp: ENSP00000411986.2:p.Arg213His
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22179
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33727
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg213His
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

7-76112199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112199
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112199
    reference: chr 7
allele count: 92
allele frequency: 7.587253414264037e-4
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.643C>T
  hgvsp: ENSP00000322885.5:p.Arg215Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.370C>T
  hgvsp: ENSP00000397648.1:p.Arg124Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.643C>T
  hgvsp: ENSP00000392545.2:p.Arg215Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.643C>T
  hgvsp: ENSP00000411986.2:p.Arg215Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.643C>T
  hgvsp: ENSP00000305242.8:p.Arg215Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.643C>T
  hgvsp: ENSP00000390218.2:p.Arg215Cys
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22188
  bin: 9.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33759
  bin: 9.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg215Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

7-76112200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112200
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112200
    reference: chr 7
allele count: 3
allele frequency: 2.474104374216534e-5
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.644G>A
  hgvsp: ENSP00000392545.2:p.Arg215His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.644G>A
  hgvsp: ENSP00000390218.2:p.Arg215His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.644G>A
  hgvsp: ENSP00000411986.2:p.Arg215His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.644G>A
  hgvsp: ENSP00000322885.5:p.Arg215His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.371G>A
  hgvsp: ENSP00000397648.1:p.Arg124His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.644G>A
  hgvsp: ENSP00000305242.8:p.Arg215His
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22176
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33732
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg215His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/7-76112201-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112201
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112201
    reference: chr 7
allele count: 21
allele frequency: 1.731673126082296e-4
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.645C>A
  hgvsp: ENST00000307569.8:c.645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.372C>A
  hgvsp: ENST00000446600.1:c.372C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.645C>A
  hgvsp: ENST00000430490.2:c.645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.645C>A
  hgvsp: ENST00000446820.2:c.645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.645C>A
  hgvsp: ENST00000413936.2:c.645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.645C>A
  hgvsp: ENST00000324432.5:c.645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22181
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg215Arg
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

7-76112203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112203
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112203
    reference: chr 7
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.647A>G
  hgvsp: ENSP00000305242.8:p.His216Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.647A>G
  hgvsp: ENSP00000411986.2:p.His216Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.647A>G
  hgvsp: ENSP00000392545.2:p.His216Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.647A>G
  hgvsp: ENSP00000322885.5:p.His216Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.647A>G
  hgvsp: ENSP00000390218.2:p.His216Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.374A>G
  hgvsp: ENSP00000397648.1:p.His125Arg
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2094
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His216Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

7-76112204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112204
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112204
    reference: chr 7
allele count: 5
allele frequency: 4.122623307663132e-5
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.648C>T
  hgvsp: ENST00000324432.5:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.648C>T
  hgvsp: ENST00000430490.2:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.648C>T
  hgvsp: ENST00000413936.2:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.648C>T
  hgvsp: ENST00000307569.8:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.375C>T
  hgvsp: ENST00000446600.1:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.648C>T
  hgvsp: ENST00000446820.2:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22176
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2094
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33726
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His216His
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

7-76112208-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112208
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112208
    reference: chr 7
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.652A>G
  hgvsp: ENSP00000392545.2:p.Met218Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.652A>G
  hgvsp: ENSP00000322885.5:p.Met218Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.379A>G
  hgvsp: ENSP00000397648.1:p.Met127Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.652A>G
  hgvsp: ENSP00000411986.2:p.Met218Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.652A>G
  hgvsp: ENSP00000390218.2:p.Met218Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.652A>G
  hgvsp: ENSP00000305242.8:p.Met218Val
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22177
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33727
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met218Val
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

7-76112212-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112212
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112212
    reference: chr 7
allele count: 7
allele frequency: 5.77072101037081e-5
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.656C>G
  hgvsp: ENSP00000411986.2:p.Thr219Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.656C>G
  hgvsp: ENSP00000392545.2:p.Thr219Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.383C>G
  hgvsp: ENSP00000397648.1:p.Thr128Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.656C>G
  hgvsp: ENSP00000322885.5:p.Thr219Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.656C>G
  hgvsp: ENSP00000305242.8:p.Thr219Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.656C>G
  hgvsp: ENSP00000390218.2:p.Thr219Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22182
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33714
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4681
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr219Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

7-76112219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112219
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112219
    reference: chr 7
allele count: 760
allele frequency: 6.264631211052129e-3
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.663C>T
  hgvsp: ENST00000413936.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.663C>T
  hgvsp: ENST00000446820.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.663C>T
  hgvsp: ENST00000307569.8:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.663C>T
  hgvsp: ENST00000430490.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.390C>T
  hgvsp: ENST00000446600.1:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.663C>T
  hgvsp: ENST00000324432.5:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 8.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22408
  bin: 9.75e1
  variant carriers: 526
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Leu221Leu
num of homozygotes: 4
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

7-76112228-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112228
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112228
    reference: chr 7
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.672C>T
  hgvsp: ENST00000324432.5:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.672C>T
  hgvsp: ENST00000307569.8:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.672C>T
  hgvsp: ENST00000430490.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.399C>T
  hgvsp: ENST00000446600.1:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.672C>T
  hgvsp: ENST00000413936.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.672C>T
  hgvsp: ENST00000446820.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr224Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

7-76112229-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112229
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112229
    reference: chr 7
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.673C>G
  hgvsp: ENSP00000392545.2:p.Pro225Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.673C>G
  hgvsp: ENSP00000305242.8:p.Pro225Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.673C>G
  hgvsp: ENSP00000322885.5:p.Pro225Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.673C>G
  hgvsp: ENSP00000411986.2:p.Pro225Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.400C>G
  hgvsp: ENSP00000397648.1:p.Pro134Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.673C>G
  hgvsp: ENSP00000390218.2:p.Pro225Ala
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4672
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro225Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

7-76112231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112231
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112231
    reference: chr 7
allele count: 4
allele frequency: 3.297065611605671e-5
allele num: 121320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.675C>T
  hgvsp: ENST00000413936.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.675C>T
  hgvsp: ENST00000430490.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.675C>T
  hgvsp: ENST00000307569.8:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.402C>T
  hgvsp: ENST00000446600.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.675C>T
  hgvsp: ENST00000324432.5:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.675C>T
  hgvsp: ENST00000446820.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22366
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro225Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

7-76112232-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112232
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112232
    reference: chr 7
allele count: 6
allele frequency: 4.945516888940176e-5
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.676G>A
  hgvsp: ENSP00000322885.5:p.Val226Ile
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.676G>A
  hgvsp: ENSP00000392545.2:p.Val226Ile
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.403G>A
  hgvsp: ENSP00000397648.1:p.Val135Ile
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.676G>A
  hgvsp: ENSP00000390218.2:p.Val226Ile
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.676G>A
  hgvsp: ENSP00000305242.8:p.Val226Ile
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.676G>A
  hgvsp: ENSP00000411986.2:p.Val226Ile
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22365
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val226Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ

7-76112233-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112233
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112233
    reference: chr 7
allele count: 402
allele frequency: 3.331234048195167e-3
allele num: 120676
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.677T>C
  hgvsp: ENSP00000322885.5:p.Val226Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.404T>C
  hgvsp: ENSP00000397648.1:p.Val135Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.677T>C
  hgvsp: ENSP00000411986.2:p.Val226Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.677T>C
  hgvsp: ENSP00000305242.8:p.Val226Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.677T>C
  hgvsp: ENSP00000392545.2:p.Val226Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.677T>C
  hgvsp: ENSP00000390218.2:p.Val226Ala
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22564
  bin: 9.75e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12690
  bin: 6.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 8.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 4660
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 10
hgvs: p.Val226Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

7-76112235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112235
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112235
    reference: chr 7
allele count: 2
allele frequency: 1.648532805802836e-5
allele num: 121320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.679C>T
  hgvsp: ENSP00000305242.8:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.406C>T
  hgvsp: ENSP00000397648.1:p.Pro136Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.679C>T
  hgvsp: ENSP00000390218.2:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.679C>T
  hgvsp: ENSP00000411986.2:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.679C>T
  hgvsp: ENSP00000392545.2:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.679C>T
  hgvsp: ENSP00000322885.5:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22114
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4656
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12729
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro227Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/7-76112238-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112238
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112238
    reference: chr 7
allele count: 4
allele frequency: 3.296956908773203e-5
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.682C>A
  hgvsp: ENSP00000390218.2:p.Gln228Lys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.682C>A
  hgvsp: ENSP00000392545.2:p.Gln228Lys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.682C>A
  hgvsp: ENSP00000322885.5:p.Gln228Lys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.682C>A
  hgvsp: ENSP00000305242.8:p.Gln228Lys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.409C>A
  hgvsp: ENSP00000397648.1:p.Gln137Lys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.682C>A
  hgvsp: ENSP00000411986.2:p.Gln228Lys
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22118
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12797
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln228Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

7-76112240-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112240
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112240
    reference: chr 7
allele count: 13
allele frequency: 1.071510995351291e-4
allele num: 121324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.684G>C
  hgvsp: ENSP00000390218.2:p.Gln228His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.411G>C
  hgvsp: ENSP00000397648.1:p.Gln137His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.684G>C
  hgvsp: ENSP00000392545.2:p.Gln228His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.684G>C
  hgvsp: ENSP00000322885.5:p.Gln228His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.684G>C
  hgvsp: ENSP00000305242.8:p.Gln228His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.684G>C
  hgvsp: ENSP00000411986.2:p.Gln228His
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22115
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33430
  bin: 9.75e1
  variant carriers: 13
hgvs: p.Gln228His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

7-76112241-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112241
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112241
    reference: chr 7
allele count: 5
allele frequency: 4.121332014507089e-5
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.412C>G
  hgvsp: ENSP00000397648.1:p.His138Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.685C>G
  hgvsp: ENSP00000411986.2:p.His229Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.685C>G
  hgvsp: ENSP00000390218.2:p.His229Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.685C>G
  hgvsp: ENSP00000392545.2:p.His229Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.685C>G
  hgvsp: ENSP00000305242.8:p.His229Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.685C>G
  hgvsp: ENSP00000322885.5:p.His229Asp
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22117
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His229Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum

7-76112241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112241
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112241
    reference: chr 7
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.685C>T
  hgvsp: ENSP00000305242.8:p.His229Tyr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.685C>T
  hgvsp: ENSP00000390218.2:p.His229Tyr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.685C>T
  hgvsp: ENSP00000411986.2:p.His229Tyr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.685C>T
  hgvsp: ENSP00000392545.2:p.His229Tyr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.412C>T
  hgvsp: ENSP00000397648.1:p.His138Tyr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.685C>T
  hgvsp: ENSP00000322885.5:p.His229Tyr
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22117
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His229Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/7-76112242-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112242
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112243
    reference: chr 7
allele count: 3
allele frequency: 2.473166147301776e-5
allele num: 121302
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.692dupC
  hgvsp: ENSP00000411986.2:p.His232ThrfsTer122
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.692dupC
  hgvsp: ENSP00000392545.2:p.His232ThrfsTer132
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.419dupC
  hgvsp: ENSP00000397648.1:p.His141ThrfsTer122
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.692dupC
  hgvsp: ENSP00000305242.8:p.His232ThrfsTer132
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.692dupC
  hgvsp: ENSP00000390218.2:p.His232ThrfsTer122
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.692dupC
  hgvsp: ENSP00000322885.5:p.His232ThrfsTer122
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8532
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22118
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4638
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His232ThrfsTer122
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

7-76112243-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112243
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112243
    reference: chr 7
allele count: 2
allele frequency: 1.64883180266781e-5
allele num: 121298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.414C>G
  hgvsp: ENSP00000397648.1:p.His138Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.687C>G
  hgvsp: ENSP00000390218.2:p.His229Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.687C>G
  hgvsp: ENSP00000305242.8:p.His229Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.687C>G
  hgvsp: ENSP00000322885.5:p.His229Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.687C>G
  hgvsp: ENSP00000392545.2:p.His229Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.687C>G
  hgvsp: ENSP00000411986.2:p.His229Gln
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22119
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33418
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12761
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His229Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-76112245-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112245
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112245
    reference: chr 7
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.416C>G
  hgvsp: ENSP00000397648.1:p.Pro139Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.689C>G
  hgvsp: ENSP00000305242.8:p.Pro230Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.689C>G
  hgvsp: ENSP00000390218.2:p.Pro230Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.689C>G
  hgvsp: ENSP00000322885.5:p.Pro230Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.689C>G
  hgvsp: ENSP00000411986.2:p.Pro230Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.689C>G
  hgvsp: ENSP00000392545.2:p.Pro230Arg
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22120
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33423
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Pro230Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

7-76112246-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112246
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112246
    reference: chr 7
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.417C>G
  hgvsp: ENST00000446600.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.690C>G
  hgvsp: ENST00000430490.2:c.690C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.690C>G
  hgvsp: ENST00000324432.5:c.690C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.690C>G
  hgvsp: ENST00000307569.8:c.690C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.690C>G
  hgvsp: ENST00000413936.2:c.690C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.690C>G
  hgvsp: ENST00000446820.2:c.690C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22529
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12724
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro230Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

7-76112246-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112246
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112246
    reference: chr 7
allele count: 727
allele frequency: 5.992219181695295e-3
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.690C>T
  hgvsp: ENST00000324432.5:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.690C>T
  hgvsp: ENST00000430490.2:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.690C>T
  hgvsp: ENST00000307569.8:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.417C>T
  hgvsp: ENST00000446600.1:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.690C>T
  hgvsp: ENST00000413936.2:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.690C>T
  hgvsp: ENST00000446820.2:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22529
  bin: 9.75e1
  variant carriers: 667
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro230Pro
num of homozygotes: 2
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-76112247-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112247
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112247
    reference: chr 7
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.691C>G
  hgvsp: ENSP00000305242.8:p.Pro231Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.691C>G
  hgvsp: ENSP00000322885.5:p.Pro231Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.691C>G
  hgvsp: ENSP00000411986.2:p.Pro231Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.691C>G
  hgvsp: ENSP00000392545.2:p.Pro231Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.418C>G
  hgvsp: ENSP00000397648.1:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.691C>G
  hgvsp: ENSP00000390218.2:p.Pro231Ala
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22098
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7703
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro231Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/7-76112248-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112248
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112248
    reference: chr 7
allele count: 16
allele frequency: 1.31974001121779e-4
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.692C>A
  hgvsp: ENSP00000411986.2:p.Pro231Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.692C>A
  hgvsp: ENSP00000305242.8:p.Pro231Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.692C>A
  hgvsp: ENSP00000392545.2:p.Pro231Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.692C>A
  hgvsp: ENSP00000390218.2:p.Pro231Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.419C>A
  hgvsp: ENSP00000397648.1:p.Pro140Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.692C>A
  hgvsp: ENSP00000322885.5:p.Pro231Gln
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22109
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33221
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12718
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro231Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

7-76112248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112248
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112248
    reference: chr 7
allele count: 12
allele frequency: 9.898050084133426e-5
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.419C>T
  hgvsp: ENSP00000397648.1:p.Pro140Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.692C>T
  hgvsp: ENSP00000411986.2:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.692C>T
  hgvsp: ENSP00000390218.2:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.692C>T
  hgvsp: ENSP00000305242.8:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.692C>T
  hgvsp: ENSP00000322885.5:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.692C>T
  hgvsp: ENSP00000392545.2:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22109
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33221
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 4644
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro231Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-76112248-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112248
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112247
    reference: chr 7
allele count: 9
allele frequency: 7.423537563100069e-5
allele num: 121236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.420delA
  hgvsp: ENSP00000397648.1:p.His141ThrfsTer30
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.693delA
  hgvsp: ENSP00000392545.2:p.His232ThrfsTer30
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.693delA
  hgvsp: ENSP00000305242.8:p.His232ThrfsTer30
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.693delA
  hgvsp: ENSP00000411986.2:p.His232ThrfsTer30
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.693delA
  hgvsp: ENSP00000390218.2:p.His232ThrfsTer30
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.693delA
  hgvsp: ENSP00000322885.5:p.His232ThrfsTer30
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22109
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2593
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 1
hgvs: p.His232ThrfsTer30
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: CA
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-76112249-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112249
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112249
    reference: chr 7
allele count: 11676
allele frequency: 1.205177432340373e-1
allele num: 96882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.693A>C
  hgvsp: ENST00000413936.2:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.693A>C
  hgvsp: ENST00000446820.2:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.420A>C
  hgvsp: ENST00000446600.1:c.420A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.693A>C
  hgvsp: ENST00000307569.8:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.693A>C
  hgvsp: ENST00000324432.5:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.693A>C
  hgvsp: ENST00000430490.2:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 7280
  bin: 3.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 2.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.25e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 6.25e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 2.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 3.75e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 26593
  bin: 9.75e1
  variant carriers: 10446
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 4.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 9.25e1
  variant carriers: 170
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 7.75e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 9801
  bin: 2.5e0
  variant carriers: 215
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 3.25e1
  variant carriers: 245
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 1.75e1
  variant carriers: 211
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 4.75e1
  variant carriers: 226
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 1.25e1
  variant carriers: 229
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 8.75e1
  variant carriers: 180
genotype quality: GenotypeQuality
  all individuals: 16414
  bin: 9.75e1
  variant carriers: 8687
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 4.25e1
  variant carriers: 212
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 2.75e1
  variant carriers: 187
hgvs: p.Pro231Pro
num of homozygotes: 12
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

7-76112249-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112249
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112249
    reference: chr 7
allele count: 5
allele frequency: 5.160917404677856e-5
allele num: 96882
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.693A>G
  hgvsp: ENST00000307569.8:c.693A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.693A>G
  hgvsp: ENST00000324432.5:c.693A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.693A>G
  hgvsp: ENST00000413936.2:c.693A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.693A>G
  hgvsp: ENST00000446820.2:c.693A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.420A>G
  hgvsp: ENST00000446600.1:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.693A>G
  hgvsp: ENST00000430490.2:c.693A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26593
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16414
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro231Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/7-76112250-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112250
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112250
    reference: chr 7
allele count: 10
allele frequency: 8.253549026081215e-5
allele num: 121160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.694C>A
  hgvsp: ENSP00000390218.2:p.His232Asn
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.694C>A
  hgvsp: ENSP00000411986.2:p.His232Asn
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.694C>A
  hgvsp: ENSP00000392545.2:p.His232Asn
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.421C>A
  hgvsp: ENSP00000397648.1:p.His141Asn
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.694C>A
  hgvsp: ENSP00000305242.8:p.His232Asn
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.694C>A
  hgvsp: ENSP00000322885.5:p.His232Asn
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14372
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4163
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8429
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His232Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

7-76112258-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112258
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112258
    reference: chr 7
allele count: 7
allele frequency: 5.773672055427252e-5
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.429C>T
  hgvsp: ENST00000446600.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.702C>T
  hgvsp: ENST00000413936.2:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.702C>T
  hgvsp: ENST00000430490.2:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.702C>T
  hgvsp: ENST00000446820.2:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.702C>T
  hgvsp: ENST00000307569.8:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.702C>T
  hgvsp: ENST00000324432.5:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23484
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr234Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

7-76112259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112259
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112259
    reference: chr 7
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.703G>A
  hgvsp: ENSP00000390218.2:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.430G>A
  hgvsp: ENSP00000397648.1:p.Ala144Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.703G>A
  hgvsp: ENSP00000305242.8:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.703G>A
  hgvsp: ENSP00000322885.5:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.703G>A
  hgvsp: ENSP00000392545.2:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.703G>A
  hgvsp: ENSP00000411986.2:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14009
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala235Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

7-76112260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112260
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112260
    reference: chr 7
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.704C>T
  hgvsp: ENSP00000390218.2:p.Ala235Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.704C>T
  hgvsp: ENSP00000392545.2:p.Ala235Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.704C>T
  hgvsp: ENSP00000305242.8:p.Ala235Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.704C>T
  hgvsp: ENSP00000322885.5:p.Ala235Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.431C>T
  hgvsp: ENSP00000397648.1:p.Ala144Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.704C>T
  hgvsp: ENSP00000411986.2:p.Ala235Val
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8049
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2955
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala235Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

7-76112261-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112261
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112261
    reference: chr 7
allele count: 2
allele frequency: 1.649484536082474e-5
allele num: 121250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.432T>G
  hgvsp: ENST00000446600.1:c.432T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.705T>G
  hgvsp: ENST00000430490.2:c.705T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.705T>G
  hgvsp: ENST00000324432.5:c.705T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.705T>G
  hgvsp: ENST00000307569.8:c.705T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.705T>G
  hgvsp: ENST00000413936.2:c.705T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.705T>G
  hgvsp: ENST00000446820.2:c.705T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala235Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

7-76112266-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112266
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112266
    reference: chr 7
allele count: 4
allele frequency: 3.299404457495422e-5
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.437T>G
  hgvsp: ENSP00000397648.1:p.Val146Gly
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.710T>G
  hgvsp: ENSP00000305242.8:p.Val237Gly
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.710T>G
  hgvsp: ENSP00000390218.2:p.Val237Gly
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.710T>G
  hgvsp: ENSP00000322885.5:p.Val237Gly
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.710T>G
  hgvsp: ENSP00000411986.2:p.Val237Gly
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.710T>G
  hgvsp: ENSP00000392545.2:p.Val237Gly
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14004
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23532
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8444
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val237Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-76112267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112267
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112267
    reference: chr 7
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.711G>A
  hgvsp: ENST00000307569.8:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.711G>A
  hgvsp: ENST00000446820.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.711G>A
  hgvsp: ENST00000324432.5:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.711G>A
  hgvsp: ENST00000430490.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.438G>A
  hgvsp: ENST00000446600.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.711G>A
  hgvsp: ENST00000413936.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8442
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val237Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

7-76112271-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112271
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112271
    reference: chr 7
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.715G>C
  hgvsp: ENSP00000305242.8:p.Gly239Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.715G>C
  hgvsp: ENSP00000392545.2:p.Gly239Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.715G>C
  hgvsp: ENSP00000390218.2:p.Gly239Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.442G>C
  hgvsp: ENSP00000397648.1:p.Gly148Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.715G>C
  hgvsp: ENSP00000411986.2:p.Gly239Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.715G>C
  hgvsp: ENSP00000322885.5:p.Gly239Arg
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14000
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly239Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

7-76112272-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112272
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112272
    reference: chr 7
allele count: 2
allele frequency: 1.65016501650165e-5
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.716G>A
  hgvsp: ENSP00000392545.2:p.Gly239Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.716G>A
  hgvsp: ENSP00000411986.2:p.Gly239Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.716G>A
  hgvsp: ENSP00000305242.8:p.Gly239Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.716G>A
  hgvsp: ENSP00000390218.2:p.Gly239Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.716G>A
  hgvsp: ENSP00000322885.5:p.Gly239Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.443G>A
  hgvsp: ENSP00000397648.1:p.Gly148Glu
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23416
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly239Glu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

7-76112281-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112281
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112281
    reference: chr 7
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.725A>G
  hgvsp: ENSP00000305242.8:p.Gln242Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.725A>G
  hgvsp: ENSP00000392545.2:p.Gln242Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.725A>G
  hgvsp: ENSP00000322885.5:p.Gln242Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.725A>G
  hgvsp: ENSP00000390218.2:p.Gln242Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.452A>G
  hgvsp: ENSP00000397648.1:p.Gln151Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.725A>G
  hgvsp: ENSP00000411986.2:p.Gln242Arg
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln242Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

7-76112290-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112290
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112290
    reference: chr 7
allele count: 26
allele frequency: 2.14666688683763e-4
allele num: 121118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.734C>T
  hgvsp: ENSP00000392545.2:p.Ala245Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.461C>T
  hgvsp: ENSP00000397648.1:p.Ala154Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.734C>T
  hgvsp: ENSP00000322885.5:p.Ala245Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.734C>T
  hgvsp: ENSP00000411986.2:p.Ala245Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.734C>T
  hgvsp: ENSP00000305242.8:p.Ala245Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.734C>T
  hgvsp: ENSP00000390218.2:p.Ala245Val
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13992
  bin: 9.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4092
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala245Val
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-76112292-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112292
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112292
    reference: chr 7
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.736C>T
  hgvsp: ENSP00000305242.8:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.736C>T
  hgvsp: ENSP00000392545.2:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.463C>T
  hgvsp: ENSP00000397648.1:p.Pro155Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.736C>T
  hgvsp: ENSP00000390218.2:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.736C>T
  hgvsp: ENSP00000322885.5:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.736C>T
  hgvsp: ENSP00000411986.2:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23415
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro246Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

7-76112293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112293
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112293
    reference: chr 7
allele count: 8
allele frequency: 6.607201850016519e-5
allele num: 121080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.737C>T
  hgvsp: ENSP00000305242.8:p.Pro246Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.737C>T
  hgvsp: ENSP00000411986.2:p.Pro246Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.737C>T
  hgvsp: ENSP00000322885.5:p.Pro246Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.737C>T
  hgvsp: ENSP00000390218.2:p.Pro246Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.464C>T
  hgvsp: ENSP00000397648.1:p.Pro155Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.737C>T
  hgvsp: ENSP00000392545.2:p.Pro246Leu
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8000
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 14158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13979
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro246Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

7-76112294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112294
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112294
    reference: chr 7
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.465G>A
  hgvsp: ENST00000446600.1:c.465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.738G>A
  hgvsp: ENST00000413936.2:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.738G>A
  hgvsp: ENST00000307569.8:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.738G>A
  hgvsp: ENST00000324432.5:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.738G>A
  hgvsp: ENST00000446820.2:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.738G>A
  hgvsp: ENST00000430490.2:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro246Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

7-76112297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112297
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112297
    reference: chr 7
allele count: 94
allele frequency: 7.773863279247093e-4
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.741C>T
  hgvsp: ENST00000307569.8:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.741C>T
  hgvsp: ENST00000324432.5:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.741C>T
  hgvsp: ENST00000413936.2:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.468C>T
  hgvsp: ENST00000446600.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.741C>T
  hgvsp: ENST00000430490.2:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.741C>T
  hgvsp: ENST00000446820.2:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14112
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7984
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15583
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 9.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 2
hgvs: p.Tyr247Tyr
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-76112299-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112299
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112299
    reference: chr 7
allele count: 372
allele frequency: 3.073313395350374e-3
allele num: 121042
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.743A>G
  hgvsp: ENSP00000322885.5:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.470A>G
  hgvsp: ENSP00000397648.1:p.Asn157Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.743A>G
  hgvsp: ENSP00000411986.2:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.743A>G
  hgvsp: ENSP00000305242.8:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.743A>G
  hgvsp: ENSP00000392545.2:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.743A>G
  hgvsp: ENSP00000390218.2:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15573
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5062
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14128
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8000
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 9.75e1
  variant carriers: 334
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 23333
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn248Ser
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

7-76112311-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112311
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112311
    reference: chr 7
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.755T>C
  hgvsp: ENSP00000392545.2:p.Leu252Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.755T>C
  hgvsp: ENSP00000322885.5:p.Leu252Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.755T>C
  hgvsp: ENSP00000411986.2:p.Leu252Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.755T>C
  hgvsp: ENSP00000305242.8:p.Leu252Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.482T>C
  hgvsp: ENSP00000397648.1:p.Leu161Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.755T>C
  hgvsp: ENSP00000390218.2:p.Leu252Pro
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13705
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu252Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

7-76112315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112315
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112315
    reference: chr 7
allele count: 38
allele frequency: 3.14512257701412e-4
allele num: 120822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.759C>T
  hgvsp: ENST00000413936.2:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.759C>T
  hgvsp: ENST00000446820.2:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.759C>T
  hgvsp: ENST00000324432.5:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.486C>T
  hgvsp: ENST00000446600.1:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.759C>T
  hgvsp: ENST00000430490.2:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.759C>T
  hgvsp: ENST00000307569.8:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 15405
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser253Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

7-76112316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112316
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112316
    reference: chr 7
allele count: 24
allele frequency: 1.986491855383393e-4
allele num: 120816
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.760G>A
  hgvsp: ENSP00000322885.5:p.Gly254Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.760G>A
  hgvsp: ENSP00000411986.2:p.Gly254Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.760G>A
  hgvsp: ENSP00000390218.2:p.Gly254Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.487G>A
  hgvsp: ENSP00000397648.1:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.760G>A
  hgvsp: ENSP00000305242.8:p.Gly254Arg
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.760G>A
  hgvsp: ENSP00000392545.2:p.Gly254Arg
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15406
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13979
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8016
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Gly254Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

7-76112317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112317
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112317
    reference: chr 7
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.761G>A
  hgvsp: ENSP00000322885.5:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.761G>A
  hgvsp: ENSP00000390218.2:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.488G>A
  hgvsp: ENSP00000397648.1:p.Gly163Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.761G>A
  hgvsp: ENSP00000411986.2:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.761G>A
  hgvsp: ENSP00000392545.2:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.761G>A
  hgvsp: ENSP00000305242.8:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8196
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13669
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly254Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

7-76112318-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112318
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112318
    reference: chr 7
allele count: 26
allele frequency: 2.152674283821825e-4
allele num: 120780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.762G>A
  hgvsp: ENST00000413936.2:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.762G>A
  hgvsp: ENST00000324432.5:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.762G>A
  hgvsp: ENST00000307569.8:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.762G>A
  hgvsp: ENST00000430490.2:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.489G>A
  hgvsp: ENST00000446600.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.762G>A
  hgvsp: ENST00000446820.2:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13950
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8175
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly254Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

7-76112322-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112322
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112322
    reference: chr 7
allele count: 2
allele frequency: 1.657275439177991e-5
allele num: 120680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.766C>T
  hgvsp: ENSP00000411986.2:p.Arg256Trp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.766C>T
  hgvsp: ENSP00000322885.5:p.Arg256Trp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.766C>T
  hgvsp: ENSP00000392545.2:p.Arg256Trp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.493C>T
  hgvsp: ENSP00000397648.1:p.Arg165Trp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.766C>T
  hgvsp: ENSP00000305242.8:p.Arg256Trp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.766C>T
  hgvsp: ENSP00000390218.2:p.Arg256Trp
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg256Trp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

7-76112323-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112323
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112323
    reference: chr 7
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.767G>A
  hgvsp: ENSP00000390218.2:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.767G>A
  hgvsp: ENSP00000411986.2:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.767G>A
  hgvsp: ENSP00000322885.5:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.767G>A
  hgvsp: ENSP00000392545.2:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.494G>A
  hgvsp: ENSP00000397648.1:p.Arg165Gln
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.767G>A
  hgvsp: ENSP00000305242.8:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2916
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg256Gln
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

7-76112329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112329
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112329
    reference: chr 7
allele count: 80
allele frequency: 6.636690945894377e-4
allele num: 120542
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.773C>T
  hgvsp: ENSP00000322885.5:p.Ala258Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.773C>T
  hgvsp: ENSP00000390218.2:p.Ala258Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.500C>T
  hgvsp: ENSP00000397648.1:p.Ala167Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.773C>T
  hgvsp: ENSP00000392545.2:p.Ala258Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.773C>T
  hgvsp: ENSP00000305242.8:p.Ala258Val
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.773C>T
  hgvsp: ENSP00000411986.2:p.Ala258Val
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 9.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5091
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13809
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15124
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala258Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

7-76112330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112330
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112330
    reference: chr 7
allele count: 5
allele frequency: 4.148207144871987e-5
allele num: 120534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.774G>A
  hgvsp: ENST00000430490.2:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.501G>A
  hgvsp: ENST00000446600.1:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.774G>A
  hgvsp: ENST00000307569.8:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.774G>A
  hgvsp: ENST00000324432.5:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.774G>A
  hgvsp: ENST00000413936.2:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.774G>A
  hgvsp: ENST00000446820.2:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13782
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22818
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala258Ala
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

7-76112332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112332
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112332
    reference: chr 7
allele count: 5
allele frequency: 4.149033275246868e-5
allele num: 120510
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.776C>T
  hgvsp: ENSP00000322885.5:p.Pro259Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.776C>T
  hgvsp: ENSP00000390218.2:p.Pro259Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.776C>T
  hgvsp: ENSP00000305242.8:p.Pro259Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.503C>T
  hgvsp: ENSP00000397648.1:p.Pro168Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.776C>T
  hgvsp: ENSP00000392545.2:p.Pro259Leu
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.776C>T
  hgvsp: ENSP00000411986.2:p.Pro259Leu
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro259Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

7-76112336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112336
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112336
    reference: chr 7
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.780G>A
  hgvsp: ENST00000307569.8:c.780G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.780G>A
  hgvsp: ENST00000413936.2:c.780G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.780G>A
  hgvsp: ENST00000430490.2:c.780G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.780G>A
  hgvsp: ENST00000324432.5:c.780G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.507G>A
  hgvsp: ENST00000446600.1:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.780G>A
  hgvsp: ENST00000446820.2:c.780G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4016
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8066
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg260Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

7-76112336-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112336
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112336
    reference: chr 7
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.780G>T
  hgvsp: ENSP00000322885.5:p.Arg260Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.507G>T
  hgvsp: ENSP00000397648.1:p.Arg169Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.780G>T
  hgvsp: ENSP00000392545.2:p.Arg260Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.780G>T
  hgvsp: ENSP00000305242.8:p.Arg260Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.780G>T
  hgvsp: ENSP00000411986.2:p.Arg260Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.780G>T
  hgvsp: ENSP00000390218.2:p.Arg260Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8066
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2901
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3099
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg260Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

7-76112341-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112341
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112341
    reference: chr 7
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.785A>G
  hgvsp: ENSP00000392545.2:p.Asn262Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.785A>G
  hgvsp: ENSP00000390218.2:p.Asn262Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.785A>G
  hgvsp: ENSP00000322885.5:p.Asn262Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.512A>G
  hgvsp: ENSP00000397648.1:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.785A>G
  hgvsp: ENSP00000305242.8:p.Asn262Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.785A>G
  hgvsp: ENSP00000411986.2:p.Asn262Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4005
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn262Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

7-76112343-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112343
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112343
    reference: chr 7
allele count: 1
allele frequency: 8.320852055250457e-6
allele num: 120180
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.787A>G
  hgvsp: ENSP00000411986.2:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.514A>G
  hgvsp: ENSP00000397648.1:p.Thr172Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.787A>G
  hgvsp: ENSP00000390218.2:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.787A>G
  hgvsp: ENSP00000392545.2:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.787A>G
  hgvsp: ENSP00000322885.5:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.787A>G
  hgvsp: ENSP00000305242.8:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2893
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22335
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3999
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr263Ala
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

7-76112348-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112348
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112348
    reference: chr 7
allele count: 269
allele frequency: 2.260960193652501e-3
allele num: 118976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.519C>G
  hgvsp: ENST00000446600.1:c.519C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.792C>G
  hgvsp: ENST00000307569.8:c.792C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.792C>G
  hgvsp: ENST00000324432.5:c.792C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.792C>G
  hgvsp: ENST00000413936.2:c.792C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.792C>G
  hgvsp: ENST00000446820.2:c.792C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.792C>G
  hgvsp: ENST00000430490.2:c.792C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14619
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 7874
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 22093
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 11
hgvs: p.Thr264Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-76112348-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112348
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112348
    reference: chr 7
allele count: 1
allele frequency: 8.405056481979558e-6
allele num: 118976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.792C>A
  hgvsp: ENST00000430490.2:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.792C>A
  hgvsp: ENST00000307569.8:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.519C>A
  hgvsp: ENST00000446600.1:c.519C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.792C>A
  hgvsp: ENST00000446820.2:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.792C>A
  hgvsp: ENST00000413936.2:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.792C>A
  hgvsp: ENST00000324432.5:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22093
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12996
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr264Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

7-76112351-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112351
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112351
    reference: chr 7
allele count: 3
allele frequency: 2.50676827434072e-5
allele num: 119676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.795C>T
  hgvsp: ENST00000430490.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.522C>T
  hgvsp: ENST00000446600.1:c.522C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.795C>T
  hgvsp: ENST00000413936.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.795C>T
  hgvsp: ENST00000307569.8:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.795C>T
  hgvsp: ENST00000324432.5:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.795C>T
  hgvsp: ENST00000446820.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3969
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3030
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn265Asn
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-76112359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112359
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112359
    reference: chr 7
allele count: 324
allele frequency: 2.718348854769695e-3
allele num: 119190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.803G>A
  hgvsp: ENSP00000390218.2:p.Gly268Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.803G>A
  hgvsp: ENSP00000411986.2:p.Gly268Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.530G>A
  hgvsp: ENSP00000397648.1:p.Gly177Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.803G>A
  hgvsp: ENSP00000392545.2:p.Gly268Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.803G>A
  hgvsp: ENSP00000305242.8:p.Gly268Asp
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.803G>A
  hgvsp: ENSP00000322885.5:p.Gly268Asp
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13369
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7846
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 14658
  bin: 2.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 13054
  bin: 9.75e1
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 22677
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 3
hgvs: p.Gly268Asp
num of homozygotes: 4
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

7-76112360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112360
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112360
    reference: chr 7
allele count: 5
allele frequency: 4.190693308300926e-5
allele num: 119312
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.804C>T
  hgvsp: ENST00000324432.5:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.804C>T
  hgvsp: ENST00000413936.2:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.804C>T
  hgvsp: ENST00000430490.2:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.804C>T
  hgvsp: ENST00000307569.8:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.531C>T
  hgvsp: ENST00000446600.1:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.804C>T
  hgvsp: ENST00000446820.2:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14680
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3973
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7842
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly268Gly
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

7-76112361-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112361
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112361
    reference: chr 7
allele count: 3
allele frequency: 2.514415984980555e-5
allele num: 119312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.805G>A
  hgvsp: ENSP00000390218.2:p.Ala269Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.805G>A
  hgvsp: ENSP00000322885.5:p.Ala269Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.532G>A
  hgvsp: ENSP00000397648.1:p.Ala178Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.805G>A
  hgvsp: ENSP00000392545.2:p.Ala269Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.805G>A
  hgvsp: ENSP00000411986.2:p.Ala269Thr
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.805G>A
  hgvsp: ENSP00000305242.8:p.Ala269Thr
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala269Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

7-76112361-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112361
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112361
    reference: chr 7
allele count: 1
allele frequency: 8.381386616601851e-6
allele num: 119312
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.805G>T
  hgvsp: ENSP00000322885.5:p.Ala269Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.532G>T
  hgvsp: ENSP00000397648.1:p.Ala178Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.805G>T
  hgvsp: ENSP00000392545.2:p.Ala269Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.805G>T
  hgvsp: ENSP00000390218.2:p.Ala269Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.805G>T
  hgvsp: ENSP00000305242.8:p.Ala269Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.805G>T
  hgvsp: ENSP00000411986.2:p.Ala269Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5320
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala269Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

7-76112366-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112366
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112366
    reference: chr 7
allele count: 1
allele frequency: 8.401384548173538e-6
allele num: 119028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.537T>A
  hgvsp: ENST00000446600.1:c.537T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.810T>A
  hgvsp: ENST00000430490.2:c.810T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.810T>A
  hgvsp: ENST00000446820.2:c.810T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.810T>A
  hgvsp: ENST00000324432.5:c.810T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.810T>A
  hgvsp: ENST00000413936.2:c.810T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.810T>A
  hgvsp: ENST00000307569.8:c.810T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5041
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12847
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala270Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

7-76112373-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112373
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112373
    reference: chr 7
allele count: 2
allele frequency: 1.689788607445209e-5
allele num: 118358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.544T>C
  hgvsp: ENSP00000397648.1:p.Ser182Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.817T>C
  hgvsp: ENSP00000322885.5:p.Ser273Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.817T>C
  hgvsp: ENSP00000411986.2:p.Ser273Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.817T>C
  hgvsp: ENSP00000392545.2:p.Ser273Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.817T>C
  hgvsp: ENSP00000390218.2:p.Ser273Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.817T>C
  hgvsp: ENSP00000305242.8:p.Ser273Pro
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13026
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14236
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser273Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-76112395-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112395
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112395
    reference: chr 7
allele count: 7
allele frequency: 6.096817461285209e-5
allele num: 114814
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.839A>C
  hgvsp: ENSP00000411986.2:p.Tyr280Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.839A>C
  hgvsp: ENSP00000392545.2:p.Tyr280Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.839A>C
  hgvsp: ENSP00000390218.2:p.Tyr280Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.566A>C
  hgvsp: ENSP00000397648.1:p.Tyr189Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.839A>C
  hgvsp: ENSP00000322885.5:p.Tyr280Ser
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.839A>C
  hgvsp: ENSP00000305242.8:p.Tyr280Ser
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12277
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2894
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3810
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12687
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr280Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

7-76112397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112397
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112397
    reference: chr 7
allele count: 1
allele frequency: 8.667914846404549e-6
allele num: 115368
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.841C>T
  hgvsp: ENSP00000322885.5:p.Arg281Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.841C>T
  hgvsp: ENSP00000411986.2:p.Arg281Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.841C>T
  hgvsp: ENSP00000305242.8:p.Arg281Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.841C>T
  hgvsp: ENSP00000392545.2:p.Arg281Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.568C>T
  hgvsp: ENSP00000397648.1:p.Arg190Cys
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.841C>T
  hgvsp: ENSP00000390218.2:p.Arg281Cys
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20137
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg281Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

7-76112398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112398
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112398
    reference: chr 7
allele count: 5
allele frequency: 4.355324820125085e-5
allele num: 114802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.842G>A
  hgvsp: ENSP00000392545.2:p.Arg281His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.842G>A
  hgvsp: ENSP00000305242.8:p.Arg281His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.842G>A
  hgvsp: ENSP00000411986.2:p.Arg281His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.842G>A
  hgvsp: ENSP00000322885.5:p.Arg281His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.842G>A
  hgvsp: ENSP00000390218.2:p.Arg281His
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.569G>A
  hgvsp: ENSP00000397648.1:p.Arg190His
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12683
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2900
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg281His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

7-76112398-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76112398
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 76112398
    reference: chr 7
allele count: 1
allele frequency: 8.71064964025017e-6
allele num: 114802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000305242
  ensembl transcript: ENST00000307569
  gene symbol: DTX2
  hgvsc: ENST00000307569.8:c.842G>C
  hgvsp: ENSP00000305242.8:p.Arg281Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000322885
  ensembl transcript: ENST00000324432
  gene symbol: DTX2
  hgvsc: ENST00000324432.5:c.842G>C
  hgvsp: ENSP00000322885.5:p.Arg281Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000397648
  ensembl transcript: ENST00000446600
  gene symbol: DTX2
  hgvsc: ENST00000446600.1:c.569G>C
  hgvsp: ENSP00000397648.1:p.Arg190Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000390218
  ensembl transcript: ENST00000413936
  gene symbol: DTX2
  hgvsc: ENST00000413936.2:c.842G>C
  hgvsp: ENSP00000390218.2:p.Arg281Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000411986
  ensembl transcript: ENST00000430490
  gene symbol: DTX2
  hgvsc: ENST00000430490.2:c.842G>C
  hgvsp: ENSP00000411986.2:p.Arg281Pro
  variant of: http://identifiers.org/hgnc/15973
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091073
  ensembl protein: ENSP00000392545
  ensembl transcript: ENST00000446820
  gene symbol: DTX2
  hgvsc: ENST00000446820.2:c.842G>C
  hgvsp: ENSP00000392545.2:p.Arg281Pro
  variant of: http://identifiers.org/hgnc/15973
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg281Pro
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.470615455807496e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508701794463314e-5
allele num: 66538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.212e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.975e0

MQ
type: SiteQuality
SIO_000300: 5.593e1

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 5.720269e6

QD
type: SiteQuality
SIO_000300: 9.08e0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12722
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002371873780286e-5
allele num: 66614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 85
allele frequency: 5.14839491217444e-3
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQ
type: SiteQuality
SIO_000300: 5.471e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.47e-1

DP
type: SiteQuality
SIO_000300: 5.725661e6

QD
type: SiteQuality
SIO_000300: 1.128e1

VQSLOD
type: SiteQuality
SIO_000300: -1.057e0

GenotypeQuality
all individuals: 2092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12731
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002371873780286e-5
allele num: 66614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.723933e6

MQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

FS
type: SiteQuality
SIO_000300: 1.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.374e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.537e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.108e0

GenotypeQuality
all individuals: 2573
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12741
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33732
bin: 9.75e1
variant carriers: 21

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.801098670188815e-4
allele num: 66626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.37e-1

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.052e0

VQSLOD
type: SiteQuality
SIO_000300: -1.426e0

QD
type: SiteQuality
SIO_000300: 1.148e1

DP
type: SiteQuality
SIO_000300: 5.725034e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.524e1

GenotypeQuality
all individuals: 12759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33725
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1954
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.571e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.593e0

DP
type: SiteQuality
SIO_000300: 5.724219e6

FS
type: SiteQuality
SIO_000300: 2.636e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 7.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.503226387346559e-5
allele num: 66638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.724529e6

MQRankSum
type: SiteQuality
SIO_000300: 2.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e0

MQ
type: SiteQuality
SIO_000300: 5.565e1

FS
type: SiteQuality
SIO_000300: 1.862e0

VQSLOD
type: SiteQuality
SIO_000300: -1.752e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
all individuals: 4681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2573
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.5863e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.546e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.029e0

DP
type: SiteQuality
SIO_000300: 5.724964e6

VQSLOD
type: SiteQuality
SIO_000300: -6.179e0

MQ
type: SiteQuality
SIO_000300: 5.535e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.426e0

QD
type: SiteQuality
SIO_000300: 1.12e1

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 8.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.050168026884302e-4
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.312e1

VQSLOD
type: SiteQuality
SIO_000300: -4.347e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.573e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

DP
type: SiteQuality
SIO_000300: 5.726316e6

QD
type: SiteQuality
SIO_000300: 9.8e-1

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33841
bin: 9.75e1
variant carriers: 754

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.071666162685213e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.214128035320088e-2
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 303
allele frequency: 4.544909101817964e-3
allele num: 66668
num of homozygotes: 1

African
type: Population
allele count: 16
allele frequency: 1.539053482108503e-3
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 362
allele frequency: 2.192876181245457e-2
allele num: 16508
num of homozygotes: 3

East Asian
type: Population
allele count: 16
allele frequency: 1.850138760407031e-3
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 46
allele frequency: 3.973738769868694e-3
allele num: 11576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.196e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 7.57e0

VQSLOD
type: SiteQuality
SIO_000300: -5.911e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.156e0

MQRankSum
type: SiteQuality
SIO_000300: -1.294e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQ
type: SiteQuality
SIO_000300: 5.21e1

DP
type: SiteQuality
SIO_000300: 5.768813e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.761287e6

FS
type: SiteQuality
SIO_000300: 1.064e0

QD
type: SiteQuality
SIO_000300: 1.251e1

VQSLOD
type: SiteQuality
SIO_000300: -1.022e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.25e-1

MQ
type: SiteQuality
SIO_000300: 5.704e1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33690
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.437e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.99e-1

FS
type: SiteQuality
SIO_000300: 5.784e0

MQ
type: SiteQuality
SIO_000300: 5.028e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.161e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 2.42e0

MQRankSum
type: SiteQuality
SIO_000300: -1.925e0

DP
type: SiteQuality
SIO_000300: 5.76134e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33690
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.179e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.397e1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.529e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.761429e6

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33690
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999760019198464e-5
allele num: 66672
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817520901490367e-4
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.479e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.198e0

VQSLOD
type: SiteQuality
SIO_000300: -7.097e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

DP
type: SiteQuality
SIO_000300: 5.761244e6

QD
type: SiteQuality
SIO_000300: 1.128e1

MQ
type: SiteQuality
SIO_000300: 5.628e1

GenotypeQuality
all individuals: 224
bin: 2.5e0
variant carriers: 9

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 12

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 13

GenotypeQuality
all individuals: 33133
bin: 9.75e1
variant carriers: 243

GenotypeQuality
all individuals: 2093
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 13

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 12

East Asian
type: Population
allele count: 3
allele frequency: 3.469812630117973e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.424778761061947e-3
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 279
allele frequency: 2.79559118236473e-2
allele num: 9980
num of homozygotes: 0

South Asian
type: Population
allele count: 81
allele frequency: 4.940832011711602e-3
allele num: 16394
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.808433107756377e-4
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.9032006245121e-4
allele num: 66612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.614e0

QD
type: SiteQuality
SIO_000300: 8.2e-1

MQ
type: SiteQuality
SIO_000300: 5.327e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 5.447e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

MQRankSum
type: SiteQuality
SIO_000300: -5.078e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.053e0

DP
type: SiteQuality
SIO_000300: 5.839797e6

GenotypeQuality
all individuals: 33429
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.456e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.442e0

DP
type: SiteQuality
SIO_000300: 5.735842e6

VQSLOD
type: SiteQuality
SIO_000300: -5.067e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.759e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 5.458e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33430
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.424e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.374e0

VQSLOD
type: SiteQuality
SIO_000300: -1.643e0

QD
type: SiteQuality
SIO_000300: 1.395e1

DP
type: SiteQuality
SIO_000300: 5.736578e6

MQ
type: SiteQuality
SIO_000300: 5.763e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12820
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 111
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GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4658
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.94972703821465e-4
allele num: 66676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.808e0

QD
type: SiteQuality
SIO_000300: 7.67e0

MQ
type: SiteQuality
SIO_000300: 5.352e1

MQRankSum
type: SiteQuality
SIO_000300: 3.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.285e0

FS
type: SiteQuality
SIO_000300: 5.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 5.736881e6

GenotypeQuality
all individuals: 1964
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variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4656
bin: 6.75e1
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GenotypeQuality
all individuals: 12747
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GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 33426
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.036e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQ
type: SiteQuality
SIO_000300: 5.663e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.424e-1

DP
type: SiteQuality
SIO_000300: 5.736373e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.663e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.424e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 5.736373e6

QD
type: SiteQuality
SIO_000300: 1.036e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.736706e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.32e-1

FS
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

MQ
type: SiteQuality
SIO_000300: 5.126e1

MQRankSum
type: SiteQuality
SIO_000300: -2.149e0

QD
type: SiteQuality
SIO_000300: 3.2e0

VQSLOD
type: SiteQuality
SIO_000300: -9.25e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2583
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

VQSLOD
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MQRankSum
type: SiteQuality
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DP
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QD
type: SiteQuality
SIO_000300: 8.76e0

FS
type: SiteQuality
SIO_000300: 3.45e0

MQ
type: SiteQuality
SIO_000300: 5.38e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1971
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.455e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.372e1

DP
type: SiteQuality
SIO_000300: 5.73757e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.689e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

QD
type: SiteQuality
SIO_000300: 6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 1.267e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.662e0

MQ
type: SiteQuality
SIO_000300: 5.639e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

FS
type: SiteQuality
SIO_000300: 1.137e0

DP
type: SiteQuality
SIO_000300: 5.850154e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.211e-1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 726

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.622516556291391e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.613535858488752e-4
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.319281271596407e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 515
allele frequency: 7.722992022074261e-3
allele num: 66684
num of homozygotes: 0

South Asian
type: Population
allele count: 36
allele frequency: 2.18287654620422e-3
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 154
allele frequency: 2.328394315089205e-2
allele num: 6614
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

FS
type: SiteQuality
SIO_000300: 1.137e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.639e1

QD
type: SiteQuality
SIO_000300: 1.267e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.211e-1

DP
type: SiteQuality
SIO_000300: 5.850154e6

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

African
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East Asian
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allele num: 8650
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InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.572e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.101218706849973e-4
allele num: 66628
num of homozygotes: 0

Other
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allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele num: 11576
num of homozygotes: 0

South Asian
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allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.393e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 93
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.936416184971098e-4
allele num: 8650
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Other
type: Population
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allele num: 904
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Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10400
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European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.003482019571351e-5
allele num: 66628
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.393e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.1e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 4644
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 7.692307692307692e-4
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.756169e6

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

MQRankSum
type: SiteQuality
SIO_000300: -1.815e0

QD
type: SiteQuality
SIO_000300: 5.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

FS
type: SiteQuality
SIO_000300: 6.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.393e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.1e-1

GenotypeQuality
all individuals: 796
bin: 5.25e1
variant carriers: 204

GenotypeQuality
all individuals: 821
bin: 3.75e1
variant carriers: 246

GenotypeQuality
all individuals: 852
bin: 7.5e0
variant carriers: 247

GenotypeQuality
all individuals: 1837
bin: 8.25e1
variant carriers: 186

GenotypeQuality
all individuals: 732
bin: 5.75e1
variant carriers: 214

GenotypeQuality
all individuals: 841
bin: 2.25e1
variant carriers: 211

GenotypeQuality
all individuals: 12283
bin: 6.25e1
variant carriers: 188

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 167

GenotypeQuality
all individuals: 4420
bin: 6.75e1
variant carriers: 170

South Asian
type: Population
allele count: 1524
allele frequency: 1.116810787043822e-1
allele num: 13646
num of homozygotes: 11

African
type: Population
allele count: 1619
allele frequency: 1.851978952184855e-1
allele num: 8742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 720
allele frequency: 1.420678768745067e-1
allele num: 5068
num of homozygotes: 0

Other
type: Population
allele count: 105
allele frequency: 1.426630434782609e-1
allele num: 736
num of homozygotes: 0

Latino
type: Population
allele count: 551
allele frequency: 5.982627578718784e-2
allele num: 9210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6779
allele frequency: 1.297813684573267e-1
allele num: 52234
num of homozygotes: 1

East Asian
type: Population
allele count: 378
allele frequency: 5.216671266905879e-2
allele num: 7246
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.744654e6

MQ
type: SiteQuality
SIO_000300: 5.439e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-1

FS
type: SiteQuality
SIO_000300: 7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.789e0

VQSLOD
type: SiteQuality
SIO_000300: -7.658e0

QD
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

GenotypeQuality
all individuals: 796
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9801
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2408
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.465630954125751e-4
allele num: 13646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.743385534326301e-5
allele num: 52234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.658e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

MQ
type: SiteQuality
SIO_000300: 5.439e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-1

FS
type: SiteQuality
SIO_000300: 7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.789e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

DP
type: SiteQuality
SIO_000300: 8.744654e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14016
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 23277
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.482456140350877e-4
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 2.393609e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.828e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.769e0

VQSLOD
type: SiteQuality
SIO_000300: -3.879e0

MQ
type: SiteQuality
SIO_000300: 5.374e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.64e-1

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2954
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14009
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2259
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8446
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.503001200480192e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.536e1

DP
type: SiteQuality
SIO_000300: 2.386981e6

VQSLOD
type: SiteQuality
SIO_000300: -5.033e-1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

GenotypeQuality
all individuals: 23524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8446
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2953
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.491e1

MQRankSum
type: SiteQuality
SIO_000300: 3.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: -3.036e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 6.03e0

DP
type: SiteQuality
SIO_000300: 2.383559e6

GenotypeQuality
all individuals: 3247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14009
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.661e1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: -2.074e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 1.0784e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.273e0

QD
type: SiteQuality
SIO_000300: 2.491e1

DP
type: SiteQuality
SIO_000300: 2.383317e6

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14008
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000840235265874e-5
allele num: 66648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.05e-1

FS
type: SiteQuality
SIO_000300: 1.762e0

VQSLOD
type: SiteQuality
SIO_000300: -4.022e0

MQRankSum
type: SiteQuality
SIO_000300: 3.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.07e-1

QD
type: SiteQuality
SIO_000300: 1.026e1

DP
type: SiteQuality
SIO_000300: 2.383086e6

MQ
type: SiteQuality
SIO_000300: 5.447e1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001290554938624e-5
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.05e0

MQ
type: SiteQuality
SIO_000300: 5.23e1

QD
type: SiteQuality
SIO_000300: 1.03e1

DP
type: SiteQuality
SIO_000300: 2.382079e6

VQSLOD
type: SiteQuality
SIO_000300: -3.54e0

FS
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.872e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

GenotypeQuality
all individuals: 2952
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14001
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.153e0

DP
type: SiteQuality
SIO_000300: 2.381485e6

VQSLOD
type: SiteQuality
SIO_000300: -3.006e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

QD
type: SiteQuality
SIO_000300: 1.098e1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e0

MQ
type: SiteQuality
SIO_000300: 5.274e1

GenotypeQuality
all individuals: 23482
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.785e1

FS
type: SiteQuality
SIO_000300: 1.885e0

DP
type: SiteQuality
SIO_000300: 2.380826e6

MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

VQSLOD
type: SiteQuality
SIO_000300: -1.061e0

MQ
type: SiteQuality
SIO_000300: 5.109e1

GenotypeQuality
all individuals: 14000
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

FS
type: SiteQuality
SIO_000300: 2.489e0

QD
type: SiteQuality
SIO_000300: 2.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.354e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 2.380628e6

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13993
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.914e0

MQ
type: SiteQuality
SIO_000300: 5.567e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.753e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.88e0

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

DP
type: SiteQuality
SIO_000300: 2.378765e6

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3189
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8345
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.306361714395541e-3
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.118e1

MQRankSum
type: SiteQuality
SIO_000300: 4.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.377776e6

VQSLOD
type: SiteQuality
SIO_000300: -1.967e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.774e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

GenotypeQuality
all individuals: 3182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8354
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13980
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1544
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.82e0

MQ
type: SiteQuality
SIO_000300: 5.326e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.799e0

MQRankSum
type: SiteQuality
SIO_000300: 3.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: -5.444e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.125e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.922e0

DP
type: SiteQuality
SIO_000300: 2.375102e6

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 334
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8355
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.936416184971098e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.109481915933529e-5
allele num: 16368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.376396e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.143e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e0

VQSLOD
type: SiteQuality
SIO_000300: -1.511e0

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.485e1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13975
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2928
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.827e1

FS
type: SiteQuality
SIO_000300: 4.432e0

DP
type: SiteQuality
SIO_000300: 2.37348e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.964e0

MQRankSum
type: SiteQuality
SIO_000300: -4.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -5.682e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 6.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1542
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 23417
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 13832
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 384
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 4070
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8326
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2933
bin: 8.25e1
variant carriers: 4

African
type: Population
allele count: 91
allele frequency: 8.867667121418827e-3
allele num: 10262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004988280545706e-5
allele num: 66556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.616e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

QD
type: SiteQuality
SIO_000300: 8.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.751e0

MQ
type: SiteQuality
SIO_000300: 5.124e1

FS
type: SiteQuality
SIO_000300: 7.82e-1

DP
type: SiteQuality
SIO_000300: 2.385424e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.125e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 13893
bin: 9.75e1
variant carriers: 370

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8329
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 7.692307692307692e-4
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 324
allele frequency: 4.86866622588207e-3
allele num: 66548
num of homozygotes: 1

Latino
type: Population
allele count: 33
allele frequency: 2.85171102661597e-3
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.444091409018697e-4
allele num: 16366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.58e0

DP
type: SiteQuality
SIO_000300: 2.387691e6

MQ
type: SiteQuality
SIO_000300: 5.321e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.03e0

VQSLOD
type: SiteQuality
SIO_000300: -2.88e0

QD
type: SiteQuality
SIO_000300: 9.74e0

GenotypeQuality
all individuals: 2258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23271
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 4065
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8218
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

MQRankSum
type: SiteQuality
SIO_000300: 4.01e0

VQSLOD
type: SiteQuality
SIO_000300: -2.599e0

QD
type: SiteQuality
SIO_000300: 1.135e1

MQ
type: SiteQuality
SIO_000300: 5.332e1

DP
type: SiteQuality
SIO_000300: 2.286221e6

GenotypeQuality
all individuals: 2254
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
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GenotypeQuality
all individuals: 23178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8186
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 3120
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variant carriers: 0

GenotypeQuality
all individuals: 13708
bin: 9.75e1
variant carriers: 38

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.559721802237678e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.366680720351743e-4
allele num: 66412
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13195977434388e-5
allele num: 16308
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 2.287756e6

QD
type: SiteQuality
SIO_000300: 1.056e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.321e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e0

FS
type: SiteQuality
SIO_000300: 1.918e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13689
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 1556
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4062
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.164929491109749e-3
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.529213347789423e-5
allele num: 66408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

VQSLOD
type: SiteQuality
SIO_000300: -5.363e-1

DP
type: SiteQuality
SIO_000300: 2.280442e6

QD
type: SiteQuality
SIO_000300: 1.179e1

FS
type: SiteQuality
SIO_000300: 1.858e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQ
type: SiteQuality
SIO_000300: 5.404e1

GenotypeQuality
all individuals: 4058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.245e0

DP
type: SiteQuality
SIO_000300: 2.277044e6

MQRankSum
type: SiteQuality
SIO_000300: 4.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

MQ
type: SiteQuality
SIO_000300: 5.377e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.639e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-1

FS
type: SiteQuality
SIO_000300: 4.98e-1

QD
type: SiteQuality
SIO_000300: 9.34e0

GenotypeQuality
all individuals: 1557
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23090
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13673
bin: 9.75e1
variant carriers: 26

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.46489906598373e-4
allele num: 66380
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.839136831780285e-4
allele num: 16312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.277039e6

FS
type: SiteQuality
SIO_000300: 1.905e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

MQ
type: SiteQuality
SIO_000300: 5.327e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.092e0

MQRankSum
type: SiteQuality
SIO_000300: 3.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.657e0

QD
type: SiteQuality
SIO_000300: 1.0e1

GenotypeQuality
all individuals: 257
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22938
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13654
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015954398769491e-5
allele num: 66314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e0

MQ
type: SiteQuality
SIO_000300: 5.393e1

DP
type: SiteQuality
SIO_000300: 2.269269e6

VQSLOD
type: SiteQuality
SIO_000300: -3.385e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.348e0

QD
type: SiteQuality
SIO_000300: 8.43e0

GenotypeQuality
all individuals: 746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23097
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13651
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 8118
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507886245061673e-5
allele num: 66318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.299e1

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 2.085e0

QD
type: SiteQuality
SIO_000300: 7.46e0

VQSLOD
type: SiteQuality
SIO_000300: -1.608e0

DP
type: SiteQuality
SIO_000300: 2.26767e6

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13679
bin: 9.75e1
variant carriers: 79

GenotypeQuality
all individuals: 22736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8070
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 77
allele frequency: 4.737295434969853e-3
allele num: 16254
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509570678099149e-5
allele num: 66244
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.76e-1

MQ
type: SiteQuality
SIO_000300: 5.249e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

VQSLOD
type: SiteQuality
SIO_000300: -1.165e0

DP
type: SiteQuality
SIO_000300: 2.263668e6

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

GenotypeQuality
all individuals: 4022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13626
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.475440222428174e-4
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020053152935492e-5
allele num: 66224
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.219e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

DP
type: SiteQuality
SIO_000300: 2.254542e6

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.475e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.62e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 13622
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2905
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2251
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.551273144652189e-5
allele num: 66214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.564e1

DP
type: SiteQuality
SIO_000300: 2.252501e6

MQRankSum
type: SiteQuality
SIO_000300: 4.34e0

VQSLOD
type: SiteQuality
SIO_000300: -2.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 3.009e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.843e0

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 170
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variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511670093118878e-5
allele num: 66152
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

VQSLOD
type: SiteQuality
SIO_000300: -3.99e0

MQRankSum
type: SiteQuality
SIO_000300: -3.048e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e0

QD
type: SiteQuality
SIO_000300: 4.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.308e0

MQ
type: SiteQuality
SIO_000300: 5.138e1

DP
type: SiteQuality
SIO_000300: 2.249352e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 170
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 13611
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1553
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variant carriers: 0

GenotypeQuality
all individuals: 22788
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.308e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

MQ
type: SiteQuality
SIO_000300: 5.138e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.048e0

QD
type: SiteQuality
SIO_000300: 4.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e0

DP
type: SiteQuality
SIO_000300: 2.249352e6

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2249
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7930
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13611
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2897
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22342
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.769441187964049e-5
allele num: 10236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.33e0

MQRankSum
type: SiteQuality
SIO_000300: 4.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e0

MQ
type: SiteQuality
SIO_000300: 5.612e1

DP
type: SiteQuality
SIO_000300: 2.241029e6

FS
type: SiteQuality
SIO_000300: 2.028e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.672e0

VQSLOD
type: SiteQuality
SIO_000300: -3.065e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 7923
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2249
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13610
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.775171065493646e-5
allele num: 10230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66004
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.465e0

DP
type: SiteQuality
SIO_000300: 2.240139e6

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQ
type: SiteQuality
SIO_000300: 5.865e1

FS
type: SiteQuality
SIO_000300: 8.113e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.409e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.360000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.444e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 260
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 304
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2227
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 7750
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 282
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 3002
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3922
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 12996
bin: 9.75e1
variant carriers: 172

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 6.869389998168163e-4
allele num: 65508
num of homozygotes: 0

African
type: Population
allele count: 199
allele frequency: 2.038934426229508e-2
allele num: 9760
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.444168734491315e-4
allele num: 16120
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601908065915004e-4
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.063829787234043e-3
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.277904328018223e-3
allele num: 878
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.236752e6

MQRankSum
type: SiteQuality
SIO_000300: -5.969e0

FS
type: SiteQuality
SIO_000300: 1.2646e1

MQ
type: SiteQuality
SIO_000300: 5.542e1

QD
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.429e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e0

GenotypeQuality
all individuals: 135
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7750
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1538
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.269e0

QD
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -5.969e0

MQ
type: SiteQuality
SIO_000300: 5.542e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.429e0

FS
type: SiteQuality
SIO_000300: 1.2646e1

DP
type: SiteQuality
SIO_000300: 2.236752e6

GenotypeQuality
all individuals: 22410
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13131
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 350
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7859
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5220700152207e-5
allele num: 65700
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.23334977799704e-4
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.671e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 1.366e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.153438e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.65e-1

MQ
type: SiteQuality
SIO_000300: 5.789e1

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 338
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2865
bin: 8.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1534
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7804
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 8

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.033060357901122e-4
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.666025112272019e-4
allele num: 65466
num of homozygotes: 0

African
type: Population
allele count: 79
allele frequency: 7.96049979846836e-3
allele num: 9924
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.335009537020982e-4
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 212
allele frequency: 1.309126837100161e-2
allele num: 16194
num of homozygotes: 4

Other
type: Population
allele count: 2
allele frequency: 2.272727272727273e-3
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

DP
type: SiteQuality
SIO_000300: 2.150781e6

MQRankSum
type: SiteQuality
SIO_000300: -4.742e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.014e0

FS
type: SiteQuality
SIO_000300: 5.472e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.995e0

VQSLOD
type: SiteQuality
SIO_000300: -3.429e0

QD
type: SiteQuality
SIO_000300: 6.44e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12854
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 181
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3030
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22661
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.055300947143294e-5
allele num: 65460
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.233197681588359e-4
allele num: 16218
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.295e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

FS
type: SiteQuality
SIO_000300: 1.569e0

MQ
type: SiteQuality
SIO_000300: 5.819e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

QD
type: SiteQuality
SIO_000300: 1.364e1

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

DP
type: SiteQuality
SIO_000300: 2.112552e6

GenotypeQuality
all individuals: 180
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12850
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.996805111821086e-4
allele num: 10016
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1667488899852e-5
allele num: 16216
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.821e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.723e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.576e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

FS
type: SiteQuality
SIO_000300: 7.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

DP
type: SiteQuality
SIO_000300: 2.112121e6

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12850
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3972
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65464
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1667488899852e-5
allele num: 16216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.576e0

MQ
type: SiteQuality
SIO_000300: 5.821e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.723e0

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.359e1

FS
type: SiteQuality
SIO_000300: 7.35e-1

DP
type: SiteQuality
SIO_000300: 2.112121e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

GenotypeQuality
all individuals: 22421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7793
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variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
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variant carriers: 0

GenotypeQuality
all individuals: 3958
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GenotypeQuality
all individuals: 2235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532332209623046e-5
allele num: 65260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.58e-1

DP
type: SiteQuality
SIO_000300: 2.103585e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.424e0

MQ
type: SiteQuality
SIO_000300: 5.7e1

QD
type: SiteQuality
SIO_000300: 1.441e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

FS
type: SiteQuality
SIO_000300: 2.055e0

VQSLOD
type: SiteQuality
SIO_000300: -1.617e0

GenotypeQuality
all individuals: 212
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12835
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3934
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2866
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7648
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541259517277519e-5
allele num: 64882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.172077521293668e-5
allele num: 16202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.117e0

DP
type: SiteQuality
SIO_000300: 2.091105e6

QD
type: SiteQuality
SIO_000300: 1.017e1

FS
type: SiteQuality
SIO_000300: 5.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.561e1

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

GenotypeQuality
all individuals: 971
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.191950464396285e-5
allele num: 16150
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.116569897275569e-4
allele num: 8956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.73634354278497e-4
allele num: 6334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.193153878085385e-5
allele num: 62634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.164e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.057e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

MQ
type: SiteQuality
SIO_000300: 4.531e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.675e0

QD
type: SiteQuality
SIO_000300: 4.23e0

MQRankSum
type: SiteQuality
SIO_000300: -1.466e0

DP
type: SiteQuality
SIO_000300: 2.036161e6

GenotypeQuality
all individuals: 523
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.589825119236884e-5
allele num: 62900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e0

FS
type: SiteQuality
SIO_000300: 7.894e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 4.283e1

DP
type: SiteQuality
SIO_000300: 2.036382e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.112e0

QD
type: SiteQuality
SIO_000300: 1.305e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

GenotypeQuality
all individuals: 711
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7194
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.795243118826125e-5
allele num: 62562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.114578689255461e-4
allele num: 8972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.751969193068441e-5
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 4.349e1

FS
type: SiteQuality
SIO_000300: 3.253e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.301e0

QD
type: SiteQuality
SIO_000300: 8.210000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.243e0

DP
type: SiteQuality
SIO_000300: 2.034927e6