6-33281518-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281518
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281518
    reference: chr 6
allele count: 28
allele frequency: 2.398944464435648e-4
allele num: 116718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.161C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.161C>G
  hgvsp: ENSP00000404833.2:p.Pro54Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.169C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+264C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.161C>G
  hgvsp: ENSP00000417949.1:p.Pro54Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.161C>G
  hgvsp: ENSP00000419659.1:p.Pro54Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.161C>G
  hgvsp: ENSP00000395701.2:p.Pro54Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.161C>G
  hgvsp: ENSP00000387803.2:p.Pro54Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.215C>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10976
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11357
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10279
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro54Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

6-33281518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281518
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281518
    reference: chr 6
allele count: 1
allele frequency: 8.567658801555887e-6
allele num: 116718
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.161C>T
  hgvsp: ENSP00000404833.2:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.169C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.161C>T
  hgvsp: ENSP00000395701.2:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.161C>T
  hgvsp: ENSP00000387803.2:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.161C>T
  hgvsp: ENSP00000419659.1:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.161C>T
  hgvsp: ENSP00000417949.1:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.215C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.161C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+264C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro54Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

6-33281518-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281518
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281518
    reference: chr 6
allele count: 1
allele frequency: 8.567658801555887e-6
allele num: 116718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.161C>A
  hgvsp: ENSP00000395701.2:p.Pro54Gln
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.161C>A
  hgvsp: ENSP00000417949.1:p.Pro54Gln
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.169C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+264C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.161C>A
  hgvsp: ENSP00000419659.1:p.Pro54Gln
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.161C>A
  hgvsp: ENSP00000404833.2:p.Pro54Gln
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.161C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.161C>A
  hgvsp: ENSP00000387803.2:p.Pro54Gln
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.215C>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20317
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro54Gln
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

6-33281524-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281524
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281524
    reference: chr 6
allele count: 1
allele frequency: 8.546716351577724e-6
allele num: 117004
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.155G>C
  hgvsp: ENSP00000404833.2:p.Gly52Ala
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.155G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.155G>C
  hgvsp: ENSP00000417949.1:p.Gly52Ala
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.209G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.163G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+258G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.155G>C
  hgvsp: ENSP00000395701.2:p.Gly52Ala
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.155G>C
  hgvsp: ENSP00000419659.1:p.Gly52Ala
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.155G>C
  hgvsp: ENSP00000387803.2:p.Gly52Ala
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11452
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly52Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

6-33281531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281531
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281531
    reference: chr 6
allele count: 1
allele frequency: 8.52747552614524e-6
allele num: 117268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.148G>A
  hgvsp: ENSP00000419659.1:p.Gly50Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.148G>A
  hgvsp: ENSP00000417949.1:p.Gly50Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+251G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.148G>A
  hgvsp: ENSP00000387803.2:p.Gly50Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.148G>A
  hgvsp: ENSP00000395701.2:p.Gly50Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.202G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.148G>A
  hgvsp: ENSP00000404833.2:p.Gly50Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.148G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.156G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly50Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-33281536-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281536
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281536
    reference: chr 6
allele count: 1
allele frequency: 8.516001566944289e-6
allele num: 117426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.143G>T
  hgvsp: ENSP00000417949.1:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.143G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.197G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.143G>T
  hgvsp: ENSP00000419659.1:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.143G>T
  hgvsp: ENSP00000404833.2:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.143G>T
  hgvsp: ENSP00000395701.2:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.143G>T
  hgvsp: ENSP00000387803.2:p.Arg48Leu
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.151G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+246G>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3245
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg48Leu
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-33281547-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281547
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281547
    reference: chr 6
allele count: 1
allele frequency: 8.49213628180305e-6
allele num: 117756
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.132A>T
  hgvsp: ENST00000426633.2:c.132A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.132A>T
  hgvsp: ENST00000434618.2:c.132A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.132A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.132A>T
  hgvsp: ENST00000456592.2:c.132A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.132A>T
  hgvsp: ENST00000475304.1:c.132A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.140A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.186A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+235A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.132A>T
  hgvsp: ENST00000489157.1:c.132A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4475
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5848
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala44Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-33281568-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281568
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281568
    reference: chr 6
allele count: 3
allele frequency: 2.534725742674643e-5
allele num: 118356
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.111C>A
  hgvsp: ENST00000426633.2:c.111C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.111C>A
  hgvsp: ENST00000489157.1:c.111C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.111C>A
  hgvsp: ENST00000475304.1:c.111C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.111C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.119C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.111C>A
  hgvsp: ENST00000456592.2:c.111C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.111C>A
  hgvsp: ENST00000434618.2:c.111C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+214C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.165C>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly37Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-33281569-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281569
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281569
    reference: chr 6
allele count: 1
allele frequency: 8.446088616361763e-6
allele num: 118398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.110G>T
  hgvsp: ENSP00000417949.1:p.Gly37Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.110G>T
  hgvsp: ENSP00000387803.2:p.Gly37Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.110G>T
  hgvsp: ENSP00000395701.2:p.Gly37Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.164G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.110G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.118G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.110G>T
  hgvsp: ENSP00000404833.2:p.Gly37Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+213G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.110G>T
  hgvsp: ENSP00000419659.1:p.Gly37Val
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly37Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

6-33281576-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281576
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281576
    reference: chr 6
allele count: 308
allele frequency: 2.599243856332703e-3
allele num: 118496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.103G>A
  hgvsp: ENSP00000419659.1:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.103G>A
  hgvsp: ENSP00000395701.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.103G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.103G>A
  hgvsp: ENSP00000387803.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.103G>A
  hgvsp: ENSP00000404833.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.111G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.103G>A
  hgvsp: ENSP00000417949.1:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+206G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.157G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 11770
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 10353
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly35Arg
num of homozygotes: 6
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

6-33281577-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281577
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281577
    reference: chr 6
allele count: 1
allele frequency: 8.436255652291287e-6
allele num: 118536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.102C>G
  hgvsp: ENSP00000387803.2:p.Ser34Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.102C>G
  hgvsp: ENSP00000395701.2:p.Ser34Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.156C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.102C>G
  hgvsp: ENSP00000417949.1:p.Ser34Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.102C>G
  hgvsp: ENSP00000404833.2:p.Ser34Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.110C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.102C>G
  hgvsp: ENSP00000419659.1:p.Ser34Arg
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.102C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+205C>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4469
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser34Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

6-33281580-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281580
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281580
    reference: chr 6
allele count: 1
allele frequency: 8.429570934839416e-6
allele num: 118630
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.99G>C
  hgvsp: ENST00000489157.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.99G>C
  hgvsp: ENST00000456592.2:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+202G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.99G>C
  hgvsp: ENST00000434618.2:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.99G>C
  hgvsp: ENST00000475304.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.107G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.99G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.99G>C
  hgvsp: ENST00000426633.2:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.153G>C
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala33Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

6-33281580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281580
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281580
    reference: chr 6
allele count: 3
allele frequency: 2.528871280451825e-5
allele num: 118630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+202G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.99G>A
  hgvsp: ENST00000489157.1:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.99G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.99G>A
  hgvsp: ENST00000475304.1:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.153G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.107G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.99G>A
  hgvsp: ENST00000456592.2:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.99G>A
  hgvsp: ENST00000434618.2:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.99G>A
  hgvsp: ENST00000426633.2:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20509
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14271
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala33Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

6-33281581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281581
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281581
    reference: chr 6
allele count: 1
allele frequency: 8.428150021070375e-6
allele num: 118650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.98C>T
  hgvsp: ENSP00000387803.2:p.Ala33Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.98C>T
  hgvsp: ENSP00000395701.2:p.Ala33Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.98C>T
  hgvsp: ENSP00000419659.1:p.Ala33Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.98C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.98C>T
  hgvsp: ENSP00000404833.2:p.Ala33Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.152C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.106C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+201C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.98C>T
  hgvsp: ENSP00000417949.1:p.Ala33Val
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5875
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala33Val
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

6-33281584-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281584
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281583
    reference: chr 6
allele count: 1
allele frequency: 8.423890152472412e-6
allele num: 118710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.94delG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.94delG
  hgvsp: ENSP00000387803.2:p.Asp32MetfsTer62
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.102delG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.94delG
  hgvsp: ENSP00000404833.2:p.Asp32MetfsTer62
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.94delG
  hgvsp: ENSP00000395701.2:p.Asp32MetfsTer62
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.94delG
  hgvsp: ENSP00000419659.1:p.Asp32MetfsTer41
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.148delG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.94delG
  hgvsp: ENSP00000417949.1:p.Asp32MetfsTer62
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+197delG
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14355
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp32MetfsTer62
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: TC
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/6-33281590-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281590
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281590
    reference: chr 6
allele count: 1
allele frequency: 8.418217021634817e-6
allele num: 118790
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.97T>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.89T>G
  hgvsp: ENSP00000417949.1:p.Val30Gly
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.89T>G
  hgvsp: ENSP00000387803.2:p.Val30Gly
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.89T>G
  hgvsp: ENSP00000404833.2:p.Val30Gly
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.89T>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.89T>G
  hgvsp: ENSP00000395701.2:p.Val30Gly
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.143T>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.89T>G
  hgvsp: ENSP00000419659.1:p.Val30Gly
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+192T>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val30Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

6-33281598-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281598
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281598
    reference: chr 6
allele count: 1
allele frequency: 8.413684015683106e-6
allele num: 118854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.135T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.89T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.81T>A
  hgvsp: ENSP00000395701.2:p.Cys27Ter
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+184T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.81T>A
  hgvsp: ENSP00000419659.1:p.Cys27Ter
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.81T>A
  hgvsp: ENSP00000417949.1:p.Cys27Ter
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.81T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.81T>A
  hgvsp: ENSP00000387803.2:p.Cys27Ter
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.81T>A
  hgvsp: ENSP00000404833.2:p.Cys27Ter
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4476
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys27Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/6-33281599-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281599
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281599
    reference: chr 6
allele count: 1
allele frequency: 8.413259296651523e-6
allele num: 118860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.80G>T
  hgvsp: ENSP00000419659.1:p.Cys27Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.80G>T
  hgvsp: ENSP00000387803.2:p.Cys27Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.80G>T
  hgvsp: ENSP00000417949.1:p.Cys27Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+183G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.80G>T
  hgvsp: ENSP00000395701.2:p.Cys27Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.80G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.80G>T
  hgvsp: ENSP00000404833.2:p.Cys27Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.134G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.88G>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys27Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

6-33281606-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281606
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281606
    reference: chr 6
allele count: 1
allele frequency: 8.417508417508417e-6
allele num: 118800
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.81A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.73A>G
  hgvsp: ENSP00000395701.2:p.Ile25Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.127A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+176A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.73A>G
  hgvsp: ENSP00000417949.1:p.Ile25Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.73A>G
  hgvsp: ENSP00000404833.2:p.Ile25Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.73A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.73A>G
  hgvsp: ENSP00000419659.1:p.Ile25Val
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.73A>G
  hgvsp: ENSP00000387803.2:p.Ile25Val
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5897
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4472
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile25Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

6-33281613-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281613
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281613
    reference: chr 6
allele count: 1
allele frequency: 8.414816809438059e-6
allele num: 118838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+169C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.74C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.66C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.66C>A
  hgvsp: ENST00000456592.2:c.66C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.66C>A
  hgvsp: ENST00000426633.2:c.66C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.66C>A
  hgvsp: ENST00000489157.1:c.66C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.66C>A
  hgvsp: ENST00000475304.1:c.66C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.120C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.66C>A
  hgvsp: ENST00000434618.2:c.66C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3402
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13989
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro22Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

6-33281622-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281622
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281622
    reference: chr 6
allele count: 6
allele frequency: 5.052631578947368e-5
allele num: 118750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+160A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.57A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.57A>C
  hgvsp: ENST00000475304.1:c.57A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.57A>C
  hgvsp: ENST00000434618.2:c.57A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.57A>C
  hgvsp: ENST00000456592.2:c.57A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.65A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.111A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.57A>C
  hgvsp: ENST00000426633.2:c.57A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.57A>C
  hgvsp: ENST00000489157.1:c.57A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11148
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser19Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

6-33281628-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281628
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281628
    reference: chr 6
allele count: 2
allele frequency: 1.68947457340767e-5
allele num: 118380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.51C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.51C>A
  hgvsp: ENST00000434618.2:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.51C>A
  hgvsp: ENST00000426633.2:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.51C>A
  hgvsp: ENST00000456592.2:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+154C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.51C>A
  hgvsp: ENST00000475304.1:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.51C>A
  hgvsp: ENST00000489157.1:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.105C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.59C>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala17Ala
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

6-33281631-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281631
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281631
    reference: chr 6
allele count: 1
allele frequency: 8.43397881384522e-6
allele num: 118568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.48C>T
  hgvsp: ENST00000456592.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.48C>T
  hgvsp: ENST00000426633.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.48C>T
  hgvsp: ENST00000434618.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.102C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.48C>T
  hgvsp: ENST00000475304.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.48C>T
  hgvsp: ENST00000489157.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.56C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+151C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.48C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20517
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr16Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum

6-33281640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281640
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281640
    reference: chr 6
allele count: 11
allele frequency: 9.272840692596901e-5
allele num: 118626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.39C>T
  hgvsp: ENST00000475304.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.47C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.39C>T
  hgvsp: ENST00000489157.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.39C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.39C>T
  hgvsp: ENST00000456592.2:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.93C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.39C>T
  hgvsp: ENST00000434618.2:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.39C>T
  hgvsp: ENST00000426633.2:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+142C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11631
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20536
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 5851
  bin: 6.75e1
  variant carriers: 0
hgvs: c.39C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ

6-33281643-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281643
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281643
    reference: chr 6
allele count: 1
allele frequency: 8.428150021070375e-6
allele num: 118650
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-2A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-2A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.90A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+139A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-2A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-2A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-2A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-2A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-2A>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20530
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
hgvs: c.38-2A>G
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-33281643-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281643
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281642
    reference: chr 6
allele count: 2
allele frequency: 1.685630004214075e-5
allele num: 118650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.89delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-3delC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+138delC
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4471
  bin: 7.75e1
  variant carriers: 0
hgvs: c.38-3delC
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: TG
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-33281646-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281646
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281646
    reference: chr 6
allele count: 1
allele frequency: 8.425735566714975e-6
allele num: 118684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-5G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-5G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.87G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-5G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-5G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-5G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-5G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+136G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-5G>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11698
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20532
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13008
  bin: 6.25e1
  variant carriers: 0
hgvs: c.38-5G>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

6-33281650-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281650
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281650
    reference: chr 6
allele count: 1
allele frequency: 8.41609156707625e-6
allele num: 118820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-9A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-9A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+132A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-9A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-9A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.83A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-9A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-9A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-9A>G
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13277
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

6-33281659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281659
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281659
    reference: chr 6
allele count: 2
allele frequency: 1.681746325384279e-5
allele num: 118924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-18C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-18C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.74C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-18C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-18C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-18C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-18C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+123C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-18C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-33281669-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281669
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281669
    reference: chr 6
allele count: 2
allele frequency: 1.679458542565877e-5
allele num: 119086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-28G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-28G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-28G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-28G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.64G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+113G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-28G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-28G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-28G>T
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3251
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

6-33281673-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281673
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281673
    reference: chr 6
allele count: 1
allele frequency: 8.38940250675347e-6
allele num: 119198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-32A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-32A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-32A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-32A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.60A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+109A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-32A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-32A>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-32A>C
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

6-33281675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281675
    reference: chr 6
allele count: 1
allele frequency: 8.38841727342885e-6
allele num: 119212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-34C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-34C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-34C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.58C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-34C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-34C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+107C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-34C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-34C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13029
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

6-33281678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281678
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281678
    reference: chr 6
allele count: 1
allele frequency: 8.385181706887589e-6
allele num: 119258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-37A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-37A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-37A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-37A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-37A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-37A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.55A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+104A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-37A>G
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5995
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13085
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

6-33281692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281692
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281692
    reference: chr 6
allele count: 1
allele frequency: 8.371002846140968e-6
allele num: 119460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.38-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.38-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.38-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.38-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.38-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000476333
  gene symbol: TAPBP
  hgvsc: ENST00000476333.1:n.41G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.46-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.38-51G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+90G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11951
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20589
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

6-33281734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281734
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281734
    reference: chr 6
allele count: 1
allele frequency: 8.304130474498016e-6
allele num: 120422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+48G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

6-33281741-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281741
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281741
    reference: chr 6
allele count: 1
allele frequency: 8.301648707433296e-6
allele num: 120458
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+41A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+41A>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9290
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

6-33281749-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281749
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281749
    reference: chr 6
allele count: 2
allele frequency: 1.660026560424967e-5
allele num: 120480
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+33C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3150
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

6-33281757-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281757
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281757
    reference: chr 6
allele count: 26
allele frequency: 2.157998705200777e-4
allele num: 120482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+25C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6436
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-33281758-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281758
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281758
    reference: chr 6
allele count: 1
allele frequency: 8.299719469481931e-6
allele num: 120486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+24G>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

6-33281761-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281761
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281761
    reference: chr 6
allele count: 1
allele frequency: 8.297653423611802e-6
allele num: 120516
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+21A>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+21A>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30587
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

6-33281766-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281766
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281766
    reference: chr 6
allele count: 2
allele frequency: 1.659640853719255e-5
allele num: 120508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+16G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30586
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

6-33281768-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281768
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281768
    reference: chr 6
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+14G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

6-33281769-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281769
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281769
    reference: chr 6
allele count: 20
allele frequency: 1.659282857948795e-4
allele num: 120534
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+13C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+13C>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

6-33281772-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281772
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281772
    reference: chr 6
allele count: 1
allele frequency: 8.293799555452344e-6
allele num: 120572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.45+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.37+10C>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-33281783-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281783
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281784
    reference: chr 6
allele count: 1
allele frequency: 8.290636555074699e-6
allele num: 120618
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.35dupT
  hgvsp: ENSP00000387803.2:p.Leu12PhefsTer52
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.35dupT
  hgvsp: ENSP00000395701.2:p.Leu12PhefsTer52
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.35dupT
  hgvsp: ENSP00000419659.1:p.Leu12PhefsTer52
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.35dupT
  hgvsp: ENSP00000404833.2:p.Leu12PhefsTer52
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.35dupT
  hgvsp: ENSP00000417523.1:p.Leu12PhefsTer145
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.35dupT
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.35dupT
  hgvsp: ENSP00000417949.1:p.Leu12PhefsTer52
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.43dupT
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu12PhefsTer52
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/6-33281783-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281783
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281781
    reference: chr 6
allele count: 1
allele frequency: 8.290636555074699e-6
allele num: 120618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.42_43delTT
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.34_35delTT
  hgvsp: ENSP00000417949.1:p.Leu12GlyfsTer51
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.34_35delTT
  hgvsp: ENSP00000387803.2:p.Leu12GlyfsTer51
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.34_35delTT
  hgvsp: ENSP00000395701.2:p.Leu12GlyfsTer51
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.34_35delTT
  hgvsp: ENSP00000404833.2:p.Leu12GlyfsTer51
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.34_35delTT
  hgvsp: ENSP00000417523.1:p.Leu12GlyfsTer144
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.34_35delTT
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.34_35delTT
  hgvsp: ENSP00000419659.1:p.Leu12GlyfsTer51
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu12GlyfsTer51
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: CAA
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

6-33281792-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281792
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281792
    reference: chr 6
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.27T>A
  hgvsp: ENST00000489157.1:c.27T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.27T>A
  hgvsp: ENST00000434618.2:c.27T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.27T>A
  hgvsp: ENST00000426633.2:c.27T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.27T>A
  hgvsp: ENST00000467025.1:c.27T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.27T>A
  hgvsp: ENST00000475304.1:c.27T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.35T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.27T>A
  hgvsp: ENST00000456592.2:c.27T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.27T>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30573
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala9Ala
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

6-33281793-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281793
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281792
    reference: chr 6
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.33delG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.25delG
  hgvsp: ENSP00000395701.2:p.Ala9LeufsTer16
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.25delG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.25delG
  hgvsp: ENSP00000417523.1:p.Ala9LeufsTer28
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.25delG
  hgvsp: ENSP00000419659.1:p.Ala9LeufsTer16
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.25delG
  hgvsp: ENSP00000404833.2:p.Ala9LeufsTer16
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.25delG
  hgvsp: ENSP00000417949.1:p.Ala9LeufsTer16
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.25delG
  hgvsp: ENSP00000387803.2:p.Ala9LeufsTer16
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30573
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5530
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala9LeufsTer16
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: GC
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

6-33281795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281795
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281795
    reference: chr 6
allele count: 2
allele frequency: 1.657138122462507e-5
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.32C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.24C>T
  hgvsp: ENST00000456592.2:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.24C>T
  hgvsp: ENST00000467025.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.24C>T
  hgvsp: ENST00000489157.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.24C>T
  hgvsp: ENST00000434618.2:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.24C>T
  hgvsp: ENST00000475304.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.24C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.24C>T
  hgvsp: ENST00000426633.2:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30573
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Leu8Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

6-33281798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281798
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281798
    reference: chr 6
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.21C>T
  hgvsp: ENST00000426633.2:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.21C>T
  hgvsp: ENST00000467025.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.21C>T
  hgvsp: ENST00000456592.2:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.29C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.21C>T
  hgvsp: ENST00000489157.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.21C>T
  hgvsp: ENST00000475304.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.21C>T
  hgvsp: ENST00000434618.2:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.21C>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu7Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-33281800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281800
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281800
    reference: chr 6
allele count: 12
allele frequency: 9.940193171087292e-5
allele num: 120722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.19C>T
  hgvsp: ENSP00000417523.1:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.19C>T
  hgvsp: ENSP00000417949.1:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.19C>T
  hgvsp: ENSP00000395701.2:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.19C>T
  hgvsp: ENSP00000387803.2:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.19C>T
  hgvsp: ENSP00000419659.1:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.27C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.19C>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.19C>T
  hgvsp: ENSP00000404833.2:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3716
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu7Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-33281801-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281801
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281801
    reference: chr 6
allele count: 12
allele frequency: 9.940193171087292e-5
allele num: 120722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.18G>T
  hgvsp: ENST00000489157.1:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.26G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.18G>T
  hgvsp: ENST00000467025.1:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.18G>T
  hgvsp: ENST00000426633.2:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.18G>T
  hgvsp: ENST00000434618.2:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.18G>T
  hgvsp: ENST00000475304.1:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.18G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.18G>T
  hgvsp: ENST00000456592.2:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5544
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu6Leu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

6-33281808-AGGGACTTCAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281808
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281798
    reference: chr 6
allele count: 1
allele frequency: 8.280750567231414e-6
allele num: 120762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.1_10delATGAAGTCCC
  hgvsp: ENSP00000395701.2:p.Met1_?4
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.1_10delATGAAGTCCC
  hgvsp: ENSP00000417523.1:p.Met1_?4
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.1_10delATGAAGTCCC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.1_10delATGAAGTCCC
  hgvsp: ENSP00000419659.1:p.Met1_?4
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.9_18delATGAAGTCCC
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.1_10delATGAAGTCCC
  hgvsp: ENSP00000404833.2:p.Met1_?4
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.1_10delATGAAGTCCC
  hgvsp: ENSP00000387803.2:p.Met1_?4
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.1_10delATGAAGTCCC
  hgvsp: ENSP00000417949.1:p.Met1_?4
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10090
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met1_?4
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: AGGGACTTCAT
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

6-33281812-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281812
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281812
    reference: chr 6
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.7T>C
  hgvsp: ENSP00000387803.2:p.Ser3Pro
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.15T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.7T>C
  hgvsp: ENSP00000417523.1:p.Ser3Pro
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.7T>C
  hgvsp: ENSP00000395701.2:p.Ser3Pro
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.7T>C
  hgvsp: ENSP00000419659.1:p.Ser3Pro
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.7T>C
  hgvsp: ENSP00000417949.1:p.Ser3Pro
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.7T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.7T>C
  hgvsp: ENSP00000404833.2:p.Ser3Pro
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3718
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser3Pro
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

6-33281812-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281812
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281812
    reference: chr 6
allele count: 19
allele frequency: 1.573446842340626e-4
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.7T>A
  hgvsp: ENSP00000419659.1:p.Ser3Thr
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.7T>A
  hgvsp: ENSP00000404833.2:p.Ser3Thr
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.7T>A
  hgvsp: ENSP00000417949.1:p.Ser3Thr
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.7T>A
  hgvsp: ENSP00000417523.1:p.Ser3Thr
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.7T>A
  hgvsp: ENSP00000387803.2:p.Ser3Thr
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.15T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.7T>A
  hgvsp: ENSP00000395701.2:p.Ser3Thr
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000437116
  gene symbol: TAPBP
  hgvsc: ENST00000437116.2:n.7T>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7965
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3718
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5545
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser3Thr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

6-33281822-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281822
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281822
    reference: chr 6
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-4C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-4C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-4C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.5C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

6-33281826-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281826
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281826
    reference: chr 6
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-8G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-8G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-8G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-8G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-8G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-8G>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000231925
  ensembl transcript: ENST00000480730
  gene symbol: TAPBP
  hgvsc: ENST00000480730.1:n.1G>C
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5507
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

6-33281828-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281828
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281828
    reference: chr 6
allele count: 1
allele frequency: 8.291598951941893e-6
allele num: 120604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-10T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-10T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-10T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-10T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-10T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-10T>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

6-33281834-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281834
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281834
    reference: chr 6
allele count: 3
allele frequency: 2.485377694563651e-5
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-16A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-16A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-16A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-16A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-16A>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-16A>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30541
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2666
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

6-33281839-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281839
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281839
    reference: chr 6
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-21G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-21G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-21G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-21G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-21G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-21G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30545
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

6-33281840-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281840
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281840
    reference: chr 6
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-22T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-22T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-22T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-22T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-22T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-22T>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

6-33281840-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281840
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281840
    reference: chr 6
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-22T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-22T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-22T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-22T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-22T>C
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-22T>C
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

6-33281841-T-TTTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281841
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281844
    reference: chr 6
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: TTTA
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-24_-23insTAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-24_-23insTAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-24_-23insTAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-24_-23insTAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-24_-23insTAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-24_-23insTAA
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30545
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-33281842-G-GCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281842
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281844
    reference: chr 6
allele count: 1
allele frequency: 8.291873963515755e-6
allele num: 120600
alternate allele: GCC
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-25_-24insGG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-25_-24insGG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-25_-24insGG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-25_-24insGG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-25_-24insGG
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-25_-24insGG
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

6-33281842-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281842
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281842
    reference: chr 6
allele count: 35752
allele frequency: 2.964510779436152e-1
allele num: 120600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-24C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-24C>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-24C>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 2.75e1
  variant carriers: 559
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 4.25e1
  variant carriers: 1548
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 6.25e1
  variant carriers: 3057
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 8.25e1
  variant carriers: 1793
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 6.75e1
  variant carriers: 2924
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 3.25e1
  variant carriers: 722
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 7.25e1
  variant carriers: 2586
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 2.25e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 5.75e1
  variant carriers: 2807
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 3.75e1
  variant carriers: 1107
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.25e1
  variant carriers: 2530
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.25e1
  variant carriers: 1057
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 4.75e1
  variant carriers: 1994
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 9.75e1
  variant carriers: 3052
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 8.75e1
  variant carriers: 1429
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 2215
genotype quality: GenotypeQuality
  all individuals: 4811
  bin: 6.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 35260
  bin: 9.75e1
  variant carriers: 29652
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 7.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 41
num of homozygotes: 5751
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-33281843-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281843
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281845
    reference: chr 6
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-26_-25insAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-26_-25insAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-26_-25insAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-26_-25insAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-26_-25insAA
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-26_-25insAA
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4819
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

6-33281843-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281843
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281843
    reference: chr 6
allele count: 35748
allele frequency: 2.962410501193317e-1
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-25T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-25T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-25T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-25T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-25T>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-25T>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 3.75e1
  variant carriers: 1195
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 6.25e1
  variant carriers: 3066
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.25e1
  variant carriers: 1721
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 7.25e1
  variant carriers: 2582
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 2911
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 4.75e1
  variant carriers: 2146
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 5.75e1
  variant carriers: 2994
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 3.25e1
  variant carriers: 797
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 8.25e1
  variant carriers: 1670
genotype depth: GenotypeDepth
  all individuals: 7469
  bin: 2.75e1
  variant carriers: 587
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 9.75e1
  variant carriers: 2655
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.75e1
  variant carriers: 2030
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 2.25e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 8.75e1
  variant carriers: 1288
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 9.25e1
  variant carriers: 952
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 5.25e1
  variant carriers: 2762
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 7.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 4819
  bin: 6.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 8.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 8
num of homozygotes: 5749
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-33281855-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281855
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281855
    reference: chr 6
allele count: 2
allele frequency: 1.657000828500414e-5
allele num: 120700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-37G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-37G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-37G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13238
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7745
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3887
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

6-33281856-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281856
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281856
    reference: chr 6
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7462
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11268
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/6-33281859-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281859
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281859
    reference: chr 6
allele count: 1
allele frequency: 8.302062232258493e-6
allele num: 120452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-41G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-41G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-41G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-41G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-41G>T
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-41G>T
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15668
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4681
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

6-33281859-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33281859
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 33281859
    reference: chr 6
allele count: 9
allele frequency: 7.471856009032644e-5
allele num: 120452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000419659
  ensembl transcript: ENST00000489157
  gene symbol: TAPBP
  hgvsc: ENST00000489157.1:c.-41G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417949
  ensembl transcript: ENST00000475304
  gene symbol: TAPBP
  hgvsc: ENST00000475304.1:c.-41G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000395701
  ensembl transcript: ENST00000434618
  gene symbol: TAPBP
  hgvsc: ENST00000434618.2:c.-41G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000387803
  ensembl transcript: ENST00000456592
  gene symbol: TAPBP
  hgvsc: ENST00000456592.2:c.-41G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000417523
  ensembl transcript: ENST00000467025
  gene symbol: TAPBP
  hgvsc: ENST00000467025.1:c.-41G>A
  variant of: http://identifiers.org/hgnc/11566
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000231925
  ensembl protein: ENSP00000404833
  ensembl transcript: ENST00000426633
  gene symbol: TAPBP
  hgvsc: ENST00000426633.2:c.-41G>A
  variant of: http://identifiers.org/hgnc/11566
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8806
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9730
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 4438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20317
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 12894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2408
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3235
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.712831469146663e-5
allele num: 63656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.605863192182411e-3
allele num: 9210
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 1.171e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

QD
type: SiteQuality
SIO_000300: 1.236e1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 2.034233e6

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1863
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20317
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570943823048888e-5
allele num: 63656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 1.236e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

FS
type: SiteQuality
SIO_000300: 1.171e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.034233e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2408
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1863
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.089392278650591e-5
allele num: 16422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.171e0

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.236e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 2.034233e6

GenotypeQuality
all individuals: 5742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4191
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20318
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13219
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
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variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4448
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.078981441519206e-4
allele num: 9268
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

FS
type: SiteQuality
SIO_000300: 4.645e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.393e-1

DP
type: SiteQuality
SIO_000300: 2.037485e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 2.042e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.735e0

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1876
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20322
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4463
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3244
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5791
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56289072268067e-5
allele num: 63984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.806e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.718e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.807e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.004e1

DP
type: SiteQuality
SIO_000300: 2.041783e6

GenotypeQuality
all individuals: 4198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13605
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20325
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5797
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560598021161709e-5
allele num: 64078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

FS
type: SiteQuality
SIO_000300: 3.176e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 5.93e1

DP
type: SiteQuality
SIO_000300: 2.044086e6

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13840
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20329
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3245
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555935895441108e-5
allele num: 64270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

QD
type: SiteQuality
SIO_000300: 1.011e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.065e0

DP
type: SiteQuality
SIO_000300: 2.048804e6

GenotypeQuality
all individuals: 3403
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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QD
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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East Asian
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African
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QD
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ReadPosRankSum
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MQ
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.091285665708368e-5
allele num: 64698
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East Asian
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allele num: 8530
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South Asian
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MQ
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ClippingRankSum
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QD
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FS
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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Latino
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FS
type: SiteQuality
SIO_000300: 1.821e0

BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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African
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Other
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South Asian
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East Asian
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ClippingRankSum
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 64796
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African
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East Asian
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South Asian
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European (Finnish)
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Other
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Latino
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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DP
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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BaseQRankSum
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FS
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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Other
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.54054720236628e-5
allele num: 64912
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.365e1

FS
type: SiteQuality
SIO_000300: 1.217e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

DP
type: SiteQuality
SIO_000300: 2.068076e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64934
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.015228426395939e-4
allele num: 9850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.865e0

QD
type: SiteQuality
SIO_000300: 7.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.846000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.067241e6

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9846
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539835545563734e-5
allele num: 64942
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 2.067364e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.124e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.89e1

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.33e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.153e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 2.066613e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 2.066562e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.707010296565756e-5
allele num: 64876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 2.064373e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.333722287047841e-4
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64668
num of homozygotes: 0

Other
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 9.58e-1

FS
type: SiteQuality
SIO_000300: 3.559e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.064567e6

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.544544668231805e-5
allele num: 64744
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African
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 95
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.678809957498482e-4
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

FS
type: SiteQuality
SIO_000300: 4.482e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.639e0

DP
type: SiteQuality
SIO_000300: 2.062233e6

QD
type: SiteQuality
SIO_000300: 1.257e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.543400419804914e-5
allele num: 64792
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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SIO_000300: 6.03e1

FS
type: SiteQuality
SIO_000300: 5.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
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SIO_000300: 2.062876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.334267040149393e-4
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64792
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.03e1

FS
type: SiteQuality
SIO_000300: 5.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.17e-1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
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QD
type: SiteQuality
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DP
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BaseQRankSum
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SIO_000300: -1.393e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.542781326174828e-5
allele num: 64818
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.52e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 2.305e0

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

ReadPosRankSum
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SIO_000300: -1.147e0

QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541117001602762e-5
allele num: 64888
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.86e0

DP
type: SiteQuality
SIO_000300: 2.064889e6

MQRankSum
type: SiteQuality
SIO_000300: -2.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.152e0

VQSLOD
type: SiteQuality
SIO_000300: -2.226e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.01010101010101e-4
allele num: 9900
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Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64960
num of homozygotes: 0

Latino
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allele count: 0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

ClippingRankSum
type: SiteQuality
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DP
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FS
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QD
type: SiteQuality
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BaseQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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allele num: 8570
num of homozygotes: 0

South Asian
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65112
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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Latino
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African
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East Asian
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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allele frequency: 1.166316771635176e-4
allele num: 8574
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.584e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.242e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.072239e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65286
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.797e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.138e0

DP
type: SiteQuality
SIO_000300: 2.079728e6

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 9.004e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.183e0

QD
type: SiteQuality
SIO_000300: 1.26e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.773260359655981e-5
allele num: 10232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.278e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.275e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 4.832e0

DP
type: SiteQuality
SIO_000300: 3.028479e6

VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

FS
type: SiteQuality
SIO_000300: 8.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

QD
type: SiteQuality
SIO_000300: 1.092e1

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

DP
type: SiteQuality
SIO_000300: 3.029231e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028100775193798e-5
allele num: 66048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.030592e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.189e0

QD
type: SiteQuality
SIO_000300: 1.207e1

FS
type: SiteQuality
SIO_000300: 1.4068e1

VQSLOD
type: SiteQuality
SIO_000300: -2.435e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 26

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 90
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.929115407147042e-4
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.330608290186817e-4
allele num: 66054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.484e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.093e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

FS
type: SiteQuality
SIO_000300: 1.135e0

DP
type: SiteQuality
SIO_000300: 3.032262e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 3.031372e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.71e-1

FS
type: SiteQuality
SIO_000300: 1.1705e1

QD
type: SiteQuality
SIO_000300: 7.29e0

ClippingRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.904e1

MQRankSum
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SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -2.47e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
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allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
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Other
type: Population
allele count: 0
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allele num: 902
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.898e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.03247e6

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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South Asian
type: Population
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.027000847560237e-5
allele num: 66072
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.505e0

DP
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QD
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.889e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

Latino
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African
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Other
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European (Non-Finnish)
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QD
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FS
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VQSLOD
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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African
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allele frequency: 1.753702260327358e-3
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South Asian
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European (Non-Finnish)
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Latino
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Other
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East Asian
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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FS
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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European (Non-Finnish)
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African
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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DP
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66132
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10292
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ReadPosRankSum
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FS
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DP
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10306
num of homozygotes: 0

Latino
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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FS
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QD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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Other
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele num: 6612
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East Asian
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European (Non-Finnish)
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Other
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African
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Latino
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South Asian
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BaseQRankSum
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VQSLOD
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510710940568632e-5
allele num: 66194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.515570934256056e-4
allele num: 11560
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 3.036898e6

QD
type: SiteQuality
SIO_000300: 1.171e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.532e0

FS
type: SiteQuality
SIO_000300: 5.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 12

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.515570934256056e-4
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510710940568632e-5
allele num: 66194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.036959e6

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.596e0

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
type: SiteQuality
SIO_000300: -3.291e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.982e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 3.036539e6

MQ
type: SiteQuality
SIO_000300: 5.414e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.036051e6

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 1.251e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

QD
type: SiteQuality
SIO_000300: 1.14e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 19

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.643598615916955e-3
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 1.251e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.14e1

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 3.036051e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9758
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variant carriers: 0

GenotypeQuality
all individuals: 5535
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.032119e6

QD
type: SiteQuality
SIO_000300: 3.101e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

FS
type: SiteQuality
SIO_000300: 1.038e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.883e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50993537476596e-5
allele num: 66228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.030195e6

VQSLOD
type: SiteQuality
SIO_000300: -1.703e0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.984e1

MQ
type: SiteQuality
SIO_000300: 5.913e1

MQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.036e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.885e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.597402597402597e-4
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.68e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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DP
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2670
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66266
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
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Other
type: Population
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allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.561e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.02697e6

QD
type: SiteQuality
SIO_000300: 1.199e1

GenotypeQuality
all individuals: 30546
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.88e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

DP
type: SiteQuality
SIO_000300: 3.026977e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

GenotypeQuality
all individuals: 30546
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5415
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.026977e6

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.945e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.813e0

QD
type: SiteQuality
SIO_000300: 5.78e0

DP
type: SiteQuality
SIO_000300: 3.025309e6

MQ
type: SiteQuality
SIO_000300: 5.083e1

FS
type: SiteQuality
SIO_000300: 1.0792e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.945e0

VQSLOD
type: SiteQuality
SIO_000300: -1.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 8271
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1761
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66268
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.94e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

QD
type: SiteQuality
SIO_000300: 2.623e1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 3.074419e6

FS
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 13

GenotypeQuality
all individuals: 549
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2396
bin: 8.25e1
variant carriers: 38

GenotypeQuality
all individuals: 1761
bin: 9.25e1
variant carriers: 47

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 14

GenotypeQuality
all individuals: 8271
bin: 6.25e1
variant carriers: 29

GenotypeQuality
all individuals: 1113
bin: 8.75e1
variant carriers: 26

South Asian
type: Population
allele count: 5082
allele frequency: 3.087109707204471e-1
allele num: 16462
num of homozygotes: 842

East Asian
type: Population
allele count: 2101
allele frequency: 2.450431537205505e-1
allele num: 8574
num of homozygotes: 239

Latino
type: Population
allele count: 4346
allele frequency: 3.781761225200139e-1
allele num: 11492
num of homozygotes: 831

European (Finnish)
type: Population
allele count: 2500
allele frequency: 3.797083839611178e-1
allele num: 6584
num of homozygotes: 486

African
type: Population
allele count: 569
allele frequency: 5.512497577988762e-2
allele num: 10322
num of homozygotes: 15

European (Non-Finnish)
type: Population
allele count: 20903
allele frequency: 3.154312790487113e-1
allele num: 66268
num of homozygotes: 3310

Other
type: Population
allele count: 251
allele frequency: 2.795100222717149e-1
allele num: 898
num of homozygotes: 28

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 3.074419e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.02e0

FS
type: SiteQuality
SIO_000300: 7.76e-1

QD
type: SiteQuality
SIO_000300: 2.623e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.94e-2

GenotypeQuality
all individuals: 8262
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35244
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 1.704e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 2.685e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.95e-2

DP
type: SiteQuality
SIO_000300: 3.02387e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.793e0

GenotypeQuality
all individuals: 1759
bin: 9.25e1
variant carriers: 45

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 15

GenotypeQuality
all individuals: 8262
bin: 6.25e1
variant carriers: 33

GenotypeQuality
all individuals: 2402
bin: 8.25e1
variant carriers: 42

GenotypeQuality
all individuals: 339
bin: 3.25e1
variant carriers: 19

GenotypeQuality
all individuals: 35244
bin: 9.75e1
variant carriers: 29644

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 29

South Asian
type: Population
allele count: 5081
allele frequency: 3.086877278250304e-1
allele num: 16460
num of homozygotes: 842

European (Finnish)
type: Population
allele count: 2498
allele frequency: 3.79404617253949e-1
allele num: 6584
num of homozygotes: 485

East Asian
type: Population
allele count: 2103
allele frequency: 2.448195576251455e-1
allele num: 8590
num of homozygotes: 240

African
type: Population
allele count: 569
allele frequency: 5.512497577988762e-2
allele num: 10322
num of homozygotes: 15

Latino
type: Population
allele count: 4344
allele frequency: 3.776077885952712e-1
allele num: 11504
num of homozygotes: 830

Other
type: Population
allele count: 251
allele frequency: 2.795100222717149e-1
allele num: 898
num of homozygotes: 28

European (Non-Finnish)
type: Population
allele count: 20902
allele frequency: 3.151973942153994e-1
allele num: 66314
num of homozygotes: 3309

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 3.02387e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.95e-2

MQ
type: SiteQuality
SIO_000300: 5.949e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.793e0

FS
type: SiteQuality
SIO_000300: 1.704e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 2.685e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

GenotypeQuality
all individuals: 493
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15686
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11441
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4923
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214919207872676e-4
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.474e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.198e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

DP
type: SiteQuality
SIO_000300: 2.227365e6

GenotypeQuality
all individuals: 4920
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3884
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15681
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.918e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 2.224531e6

VQSLOD
type: SiteQuality
SIO_000300: -2.474e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

QD
type: SiteQuality
SIO_000300: 2.626e1

GenotypeQuality
all individuals: 1759
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8427
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6017
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.179e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: 9.31e-1

QD
type: SiteQuality
SIO_000300: 1.172e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.844e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 2.1884e6