8-145138602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138602
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138602
    reference: chr 8
allele count: 4
allele frequency: 3.611542489797392e-5
allele num: 110756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.220-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.367-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.674C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.522-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.367-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-119C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.447C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.202-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.291-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.111-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.367-15C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.187-15C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10789
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4389
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-145138603-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138603
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138603
    reference: chr 8
allele count: 1
allele frequency: 9.001872389457007e-6
allele num: 111088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-118G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.187-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.675G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.367-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.448G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.291-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.367-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.111-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.220-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.367-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.202-14G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.522-14G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4389
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10835
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

8-145138613-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138613
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138613
    reference: chr 8
allele count: 1
allele frequency: 8.884624269239653e-6
allele num: 112554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.522-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.202-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.367-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.187-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.367-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.111-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.685A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.291-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.220-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.367-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.458A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-108A>G
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.367-4A>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

8-145138621-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138621
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138621
    reference: chr 8
allele count: 120
allele frequency: 1.057529610829103e-3
allele num: 113472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.115T>C
  hgvsp: ENSP00000431233.1:p.Cys39Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.526T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.466T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.371T>C
  hgvsp: ENSP00000347206.4:p.Val124Ala
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.371T>C
  hgvsp: ENSP00000434544.1:p.Val124Ala
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.693T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-100T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.371T>C
  hgvsp: ENSP00000435119.1:p.Val124Ala
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.295T>C
  hgvsp: ENSP00000435024.1:p.Cys99Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.206T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.224T>C
  hgvsp: ENSP00000435132.1:p.Val75Ala
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.191T>C
  hgvsp: ENSP00000354316.6:p.Val64Ala
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10974
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13114
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val124Ala
num of homozygotes: 1
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

8-145138622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138622
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138622
    reference: chr 8
allele count: 7
allele frequency: 6.16099561689169e-5
allele num: 113618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.192G>A
  hgvsp: ENST00000361036.6:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.207G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.372G>A
  hgvsp: ENST00000355091.4:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.527G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.467G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-99G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.372G>A
  hgvsp: ENST00000524418.1:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.225G>A
  hgvsp: ENST00000530258.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.296G>A
  hgvsp: ENSP00000435024.1:p.Cys99Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.116G>A
  hgvsp: ENSP00000431233.1:p.Cys39Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.694G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.372G>A
  hgvsp: ENST00000528073.1:c.372G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10989
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13139
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys39Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

8-145138625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138625
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138625
    reference: chr 8
allele count: 1
allele frequency: 8.774084862948794e-6
allele num: 113972
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.375G>A
  hgvsp: ENST00000355091.4:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.210G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.299G>A
  hgvsp: ENSP00000435024.1:p.Arg100Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.375G>A
  hgvsp: ENST00000528073.1:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.228G>A
  hgvsp: ENST00000530258.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-96G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.195G>A
  hgvsp: ENST00000361036.6:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.119G>A
  hgvsp: ENSP00000431233.1:p.Arg40Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.375G>A
  hgvsp: ENST00000524418.1:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.470G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.697G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.530G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg40Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

8-145138627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138627
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138627
    reference: chr 8
allele count: 2
allele frequency: 1.751160143595132e-5
allele num: 114210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.121G>A
  hgvsp: ENSP00000431233.1:p.Ala41Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.532G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.699G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.377G>A
  hgvsp: ENSP00000434544.1:p.Gly126Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.377G>A
  hgvsp: ENSP00000347206.4:p.Gly126Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.230G>A
  hgvsp: ENSP00000435132.1:p.Gly77Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.197G>A
  hgvsp: ENSP00000354316.6:p.Gly66Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.301G>A
  hgvsp: ENSP00000435024.1:p.Ala101Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.212G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.377G>A
  hgvsp: ENSP00000435119.1:p.Gly126Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.472G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-94G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly126Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

8-145138628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138628
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138628
    reference: chr 8
allele count: 1
allele frequency: 8.74630468627005e-6
allele num: 114334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.533C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.378C>T
  hgvsp: ENST00000524418.1:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.213C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.302C>T
  hgvsp: ENSP00000435024.1:p.Ala101Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.378C>T
  hgvsp: ENST00000355091.4:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.198C>T
  hgvsp: ENST00000361036.6:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.473C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.700C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.122C>T
  hgvsp: ENSP00000431233.1:p.Ala41Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-93C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.231C>T
  hgvsp: ENST00000530258.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.378C>T
  hgvsp: ENST00000528073.1:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala41Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS

8-145138634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138634
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138634
    reference: chr 8
allele count: 1
allele frequency: 8.703826201998399e-6
allele num: 114892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.204C>T
  hgvsp: ENST00000361036.6:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.479C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.384C>T
  hgvsp: ENST00000524418.1:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.308C>T
  hgvsp: ENSP00000435024.1:p.Thr103Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.384C>T
  hgvsp: ENST00000355091.4:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.706C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.237C>T
  hgvsp: ENST00000530258.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.128C>T
  hgvsp: ENSP00000431233.1:p.Thr43Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-87C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.539C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.219C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.384C>T
  hgvsp: ENST00000528073.1:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr43Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

8-145138635-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138635
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138635
    reference: chr 8
allele count: 1
allele frequency: 8.690966609306287e-6
allele num: 115062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.385G>A
  hgvsp: ENSP00000434544.1:p.Val129Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.238G>A
  hgvsp: ENSP00000435132.1:p.Val80Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.540G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.707G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-86G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.309G>A
  hgvsp: ENST00000529503.1:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.385G>A
  hgvsp: ENSP00000347206.4:p.Val129Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.385G>A
  hgvsp: ENSP00000435119.1:p.Val129Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.129G>A
  hgvsp: ENST00000530633.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.480G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.205G>A
  hgvsp: ENSP00000354316.6:p.Val69Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.220G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val129Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

8-145138640-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138640
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138640
    reference: chr 8
allele count: 1
allele frequency: 8.670921198668147e-6
allele num: 115328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.712C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.314C>G
  hgvsp: ENSP00000435024.1:p.Thr105Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.485C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.390C>G
  hgvsp: ENSP00000347206.4:p.Tyr130Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.390C>G
  hgvsp: ENSP00000434544.1:p.Tyr130Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-81C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.210C>G
  hgvsp: ENSP00000354316.6:p.Tyr70Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.134C>G
  hgvsp: ENSP00000431233.1:p.Thr45Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435132
  ensembl transcript: ENST00000530258
  gene symbol: GPAA1
  hgvsc: ENST00000530258.1:c.243C>G
  hgvsp: ENSP00000435132.1:p.Tyr81Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.225C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.390C>G
  hgvsp: ENSP00000435119.1:p.Tyr130Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.545C>G
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr130Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

8-145138641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138641
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138641
    reference: chr 8
allele count: 1
allele frequency: 8.658008658008657e-6
allele num: 115500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.226G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.546G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.135G>A
  hgvsp: ENST00000530633.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.391G>A
  hgvsp: ENSP00000435119.1:p.Gly131Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.391G>A
  hgvsp: ENSP00000434544.1:p.Gly131Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.713G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.391G>A
  hgvsp: ENSP00000347206.4:p.Gly131Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.211G>A
  hgvsp: ENSP00000354316.6:p.Gly71Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.486G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.315G>A
  hgvsp: ENST00000529503.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-80G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly131Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

8-145138651-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138651
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138651
    reference: chr 8
allele count: 2
allele frequency: 1.722207870489968e-5
allele num: 116130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.236G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.401G>A
  hgvsp: ENSP00000435119.1:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.401G>A
  hgvsp: ENSP00000434544.1:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.221G>A
  hgvsp: ENSP00000354316.6:p.Arg74Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.145G>A
  hgvsp: ENSP00000431233.1:p.Gly49Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.496G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.723G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.325G>A
  hgvsp: ENSP00000435024.1:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.401G>A
  hgvsp: ENSP00000347206.4:p.Arg134Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-70G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526341
  gene symbol: GPAA1
  hgvsc: ENST00000526341.1:n.556G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg134Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/8-145138655-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138655
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138655
    reference: chr 8
allele count: 4
allele frequency: 3.437784691544768e-5
allele num: 116354
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.405C>A
  hgvsp: ENST00000355091.4:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.329C>A
  hgvsp: ENSP00000435024.1:p.Pro110His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.727C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.240C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.149C>A
  hgvsp: ENSP00000431233.1:p.Pro50His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.405C>A
  hgvsp: ENST00000524418.1:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.500C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.405C>A
  hgvsp: ENST00000528073.1:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.225C>A
  hgvsp: ENST00000361036.6:c.225C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-66C>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4987
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro50His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

8-145138659-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138659
    reference: chr 8
allele count: 3
allele frequency: 2.574709486946223e-5
allele num: 116518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.333C>T
  hgvsp: ENST00000529503.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.504C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.409C>T
  hgvsp: ENSP00000434544.1:p.Arg137Cys
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.229C>T
  hgvsp: ENSP00000354316.6:p.Arg77Cys
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.409C>T
  hgvsp: ENSP00000435119.1:p.Arg137Cys
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.244C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.409C>T
  hgvsp: ENSP00000347206.4:p.Arg137Cys
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.153C>T
  hgvsp: ENST00000530633.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-62C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.731C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg137Cys
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

8-145138660-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138660
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138660
    reference: chr 8
allele count: 1
allele frequency: 8.572947207791094e-6
allele num: 116646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.230G>T
  hgvsp: ENSP00000354316.6:p.Arg77Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.505G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.245G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.410G>T
  hgvsp: ENSP00000435119.1:p.Arg137Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.732G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.154G>T
  hgvsp: ENSP00000431233.1:p.Val52Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.410G>T
  hgvsp: ENSP00000434544.1:p.Arg137Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-61G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.334G>T
  hgvsp: ENSP00000435024.1:p.Val112Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.410G>T
  hgvsp: ENSP00000347206.4:p.Arg137Leu
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg137Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-145138664-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138664
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138664
    reference: chr 8
allele count: 1
allele frequency: 8.557687370564979e-6
allele num: 116854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.158T>A
  hgvsp: ENSP00000431233.1:p.Leu53Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.414T>A
  hgvsp: ENST00000528073.1:c.414T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.736T>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.338T>A
  hgvsp: ENSP00000435024.1:p.Leu113Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-57T>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.414T>A
  hgvsp: ENST00000355091.4:c.414T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.249T>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.414T>A
  hgvsp: ENST00000524418.1:c.414T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.234T>A
  hgvsp: ENST00000361036.6:c.234T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.509T>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu53Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

8-145138668-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138668
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138668
    reference: chr 8
allele count: 2
allele frequency: 1.70984012994785e-5
allele num: 116970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.162A>G
  hgvsp: ENST00000530633.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.253A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.418A>G
  hgvsp: ENSP00000347206.4:p.Ser140Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-53A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.342A>G
  hgvsp: ENST00000529503.1:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.238A>G
  hgvsp: ENSP00000354316.6:p.Ser80Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.418A>G
  hgvsp: ENSP00000435119.1:p.Ser140Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.740A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.418A>G
  hgvsp: ENSP00000434544.1:p.Ser140Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.513A>G
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser140Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

8-145138673-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138673
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138673
    reference: chr 8
allele count: 2
allele frequency: 1.708175327115575e-5
allele num: 117084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.167C>T
  hgvsp: ENSP00000431233.1:p.Pro56Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.423C>T
  hgvsp: ENST00000528073.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.518C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.347C>T
  hgvsp: ENSP00000435024.1:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.423C>T
  hgvsp: ENST00000355091.4:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.423C>T
  hgvsp: ENST00000524418.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.745C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-48C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.243C>T
  hgvsp: ENST00000361036.6:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.258C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14538
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3313
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro56Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

8-145138674-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138674
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138674
    reference: chr 8
allele count: 1
allele frequency: 8.53373384990869e-6
allele num: 117182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.168G>C
  hgvsp: ENST00000530633.1:c.168G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.348G>C
  hgvsp: ENST00000529503.1:c.348G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.519G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.746G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.424G>C
  hgvsp: ENSP00000434544.1:p.Glu142Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.424G>C
  hgvsp: ENSP00000347206.4:p.Glu142Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-47G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.424G>C
  hgvsp: ENSP00000435119.1:p.Glu142Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.244G>C
  hgvsp: ENSP00000354316.6:p.Glu82Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.259G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu142Gln
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

8-145138678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138678
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138678
    reference: chr 8
allele count: 2
allele frequency: 1.704390509953641e-5
allele num: 117344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-43C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.750C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.428C>T
  hgvsp: ENSP00000435119.1:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.172C>T
  hgvsp: ENSP00000431233.1:p.Arg58Cys
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.523C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.352C>T
  hgvsp: ENSP00000435024.1:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.263C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.428C>T
  hgvsp: ENSP00000347206.4:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.248C>T
  hgvsp: ENSP00000354316.6:p.Ser83Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.428C>T
  hgvsp: ENSP00000434544.1:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser143Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

8-145138679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138679
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138679
    reference: chr 8
allele count: 1
allele frequency: 8.515421428206482e-6
allele num: 117434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.429G>A
  hgvsp: ENST00000528073.1:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.173G>A
  hgvsp: ENSP00000431233.1:p.Arg58His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.264G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.353G>A
  hgvsp: ENSP00000435024.1:p.Arg118His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.429G>A
  hgvsp: ENST00000355091.4:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.751G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.249G>A
  hgvsp: ENST00000361036.6:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.429G>A
  hgvsp: ENST00000524418.1:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.524G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-42G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14554
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg58His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

8-145138686-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138686
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138686
    reference: chr 8
allele count: 5
allele frequency: 4.252134571554921e-5
allele num: 117588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.180C>G
  hgvsp: ENSP00000431233.1:p.Cys60Trp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.531C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.436C>G
  hgvsp: ENSP00000435119.1:p.Leu146Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.360C>G
  hgvsp: ENSP00000435024.1:p.Cys120Trp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.271C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-35C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.256C>G
  hgvsp: ENSP00000354316.6:p.Leu86Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.758C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.436C>G
  hgvsp: ENSP00000434544.1:p.Leu146Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.436C>G
  hgvsp: ENSP00000347206.4:p.Leu146Val
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7248
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu146Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

8-145138692-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138692
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138692
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 117734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.262G>A
  hgvsp: ENSP00000354316.6:p.Val88Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.277G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.537G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.186G>A
  hgvsp: ENST00000530633.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.366G>A
  hgvsp: ENST00000529503.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.442G>A
  hgvsp: ENSP00000435119.1:p.Val148Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.764G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.442G>A
  hgvsp: ENSP00000434544.1:p.Val148Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-29G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.442G>A
  hgvsp: ENSP00000347206.4:p.Val148Met
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val148Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

8-145138695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138695
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138695
    reference: chr 8
allele count: 1
allele frequency: 8.485506754463376e-6
allele num: 117848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.767C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.280C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.265C>T
  hgvsp: ENSP00000354316.6:p.Pro89Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.369C>T
  hgvsp: ENST00000529503.1:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.445C>T
  hgvsp: ENSP00000434544.1:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.445C>T
  hgvsp: ENSP00000347206.4:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.445C>T
  hgvsp: ENSP00000435119.1:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.189C>T
  hgvsp: ENST00000530633.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-26C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.540C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14793
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro149Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

8-145138703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138703
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138703
    reference: chr 8
allele count: 1
allele frequency: 8.476587664869631e-6
allele num: 117972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.453C>T
  hgvsp: ENST00000528073.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.775C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.377C>T
  hgvsp: ENSP00000435024.1:p.Ala126Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-18C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.197C>T
  hgvsp: ENSP00000431233.1:p.Ala66Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.453C>T
  hgvsp: ENST00000355091.4:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.273C>T
  hgvsp: ENST00000361036.6:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.453C>T
  hgvsp: ENST00000524418.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.548C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.288C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala66Val
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

8-145138712-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138712
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138712
    reference: chr 8
allele count: 6
allele frequency: 5.078548212351029e-5
allele num: 118144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.386T>C
  hgvsp: ENSP00000435024.1:p.Leu129Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.462T>C
  hgvsp: ENST00000528073.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.557T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.462T>C
  hgvsp: ENST00000355091.4:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.297T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.282T>C
  hgvsp: ENST00000361036.6:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-9T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.462T>C
  hgvsp: ENST00000524418.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.206T>C
  hgvsp: ENSP00000431233.1:p.Leu69Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.784T>C
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu69Pro
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

8-145138717-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138717
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138717
    reference: chr 8
allele count: 1
allele frequency: 8.462384700008463e-6
allele num: 118170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.302A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.789A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.287A>G
  hgvsp: ENSP00000354316.6:p.Asn96Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.467A>G
  hgvsp: ENSP00000434544.1:p.Asn156Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.562A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.467A>G
  hgvsp: ENSP00000435119.1:p.Asn156Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.467A>G
  hgvsp: ENSP00000347206.4:p.Asn156Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-4A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.391A>G
  hgvsp: ENSP00000435024.1:p.Thr131Ala
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.211A>G
  hgvsp: ENSP00000431233.1:p.Thr71Ala
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14574
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn156Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

8-145138720-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138720
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138720
    reference: chr 8
allele count: 1
allele frequency: 8.460952703274388e-6
allele num: 118190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.470G>C
  hgvsp: ENSP00000435119.1:p.Ser157Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.565G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.470G>C
  hgvsp: ENSP00000434544.1:p.Ser157Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.792G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.214G>C
  hgvsp: ENSP00000431233.1:p.Ala72Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255-1G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.394G>C
  hgvsp: ENSP00000435024.1:p.Ala132Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.290G>C
  hgvsp: ENSP00000354316.6:p.Ser97Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.470G>C
  hgvsp: ENSP00000347206.4:p.Ser157Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.305G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7312
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 7.25e1
  variant carriers: 0
hgvs: c.255-1G>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

8-145138721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138721
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138721
    reference: chr 8
allele count: 1
allele frequency: 8.458805616646929e-6
allele num: 118220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.471C>T
  hgvsp: ENST00000524418.1:c.471C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.215C>T
  hgvsp: ENSP00000431233.1:p.Ala72Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.471C>T
  hgvsp: ENST00000355091.4:c.471C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.395C>T
  hgvsp: ENSP00000435024.1:p.Ala132Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.566C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.291C>T
  hgvsp: ENST00000361036.6:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.793C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.471C>T
  hgvsp: ENST00000528073.1:c.471C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.306C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.255C>T
  hgvsp: ENST00000525087.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala132Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

8-145138730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138730
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138730
    reference: chr 8
allele count: 8
allele frequency: 6.75812664729337e-5
allele num: 118376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.802G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.404G>A
  hgvsp: ENSP00000435024.1:p.Trp135Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.480G>A
  hgvsp: ENST00000524418.1:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.480G>A
  hgvsp: ENST00000528073.1:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.300G>A
  hgvsp: ENST00000361036.6:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.575G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.480G>A
  hgvsp: ENST00000355091.4:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.315G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.264G>A
  hgvsp: ENST00000525087.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.224G>A
  hgvsp: ENSP00000431233.1:p.Trp75Ter
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7331
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Trp135Ter
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

8-145138739-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138739
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138739
    reference: chr 8
allele count: 1
allele frequency: 8.45594452900389e-6
allele num: 118260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.233G>A
  hgvsp: ENSP00000431233.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.489G>A
  hgvsp: ENST00000524418.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.489G>A
  hgvsp: ENST00000355091.4:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.413G>A
  hgvsp: ENSP00000435024.1:p.Cys138Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.273G>A
  hgvsp: ENST00000525087.1:c.273G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.489G>A
  hgvsp: ENST00000528073.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.584G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.324G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.811G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.309G>A
  hgvsp: ENST00000361036.6:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys138Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

8-145138742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138742
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138742
    reference: chr 8
allele count: 1
allele frequency: 8.445232666159953e-6
allele num: 118410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.492G>A
  hgvsp: ENST00000528073.1:c.492G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.276G>A
  hgvsp: ENST00000525087.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.492G>A
  hgvsp: ENST00000355091.4:c.492G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.416G>A
  hgvsp: ENSP00000435024.1:p.Trp139Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.327G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.587G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.236G>A
  hgvsp: ENSP00000431233.1:p.Trp79Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.312G>A
  hgvsp: ENST00000361036.6:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.492G>A
  hgvsp: ENST00000524418.1:c.492G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.814G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp139Ter
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

8-145138742-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138742
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138742
    reference: chr 8
allele count: 1
allele frequency: 8.445232666159953e-6
allele num: 118410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.327G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.276G>T
  hgvsp: ENST00000525087.1:c.276G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.492G>T
  hgvsp: ENST00000355091.4:c.492G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.492G>T
  hgvsp: ENST00000524418.1:c.492G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.236G>T
  hgvsp: ENSP00000431233.1:p.Trp79Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.312G>T
  hgvsp: ENST00000361036.6:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.814G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.416G>T
  hgvsp: ENSP00000435024.1:p.Trp139Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.492G>T
  hgvsp: ENST00000528073.1:c.492G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.587G>T
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12207
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Trp139Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/8-145138746-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138746
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138746
    reference: chr 8
allele count: 1
allele frequency: 8.447230153232754e-6
allele num: 118382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.240C>A
  hgvsp: ENSP00000431233.1:p.His80Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.280C>A
  hgvsp: ENSP00000434485.1:p.Leu94Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.420C>A
  hgvsp: ENSP00000435024.1:p.His140Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.591C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.818C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.496C>A
  hgvsp: ENSP00000435119.1:p.Leu166Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.496C>A
  hgvsp: ENSP00000434544.1:p.Leu166Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.496C>A
  hgvsp: ENSP00000347206.4:p.Leu166Met
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.331C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.316C>A
  hgvsp: ENSP00000354316.6:p.Leu106Met
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2446
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu166Met
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

8-145138753-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138753
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138753
    reference: chr 8
allele count: 54
allele frequency: 4.672250294178722e-4
allele num: 115576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.338C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.503C>G
  hgvsp: ENSP00000435119.1:p.Ala168Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.247C>G
  hgvsp: ENSP00000431233.1:p.Pro83Ala
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.323C>G
  hgvsp: ENSP00000354316.6:p.Ala108Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.287C>G
  hgvsp: ENSP00000434485.1:p.Ala96Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.503C>G
  hgvsp: ENSP00000347206.4:p.Ala168Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.503C>G
  hgvsp: ENSP00000434544.1:p.Ala168Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.825C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.598C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.427C>G
  hgvsp: ENSP00000435024.1:p.Pro143Ala
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 14508
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11841
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7424
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13837
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.25e1
  variant carriers: 4
hgvs: p.Ala168Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/8-145138754-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138754
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138754
    reference: chr 8
allele count: 3
allele frequency: 2.526613663926695e-5
allele num: 118736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.248C>A
  hgvsp: ENSP00000431233.1:p.Pro83His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.504C>A
  hgvsp: ENST00000528073.1:c.504C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.826C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.504C>A
  hgvsp: ENST00000355091.4:c.504C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.288C>A
  hgvsp: ENST00000525087.1:c.288C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.504C>A
  hgvsp: ENST00000524418.1:c.504C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.339C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.324C>A
  hgvsp: ENST00000361036.6:c.324C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.428C>A
  hgvsp: ENSP00000435024.1:p.Pro143His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.599C>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro143His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-145138756-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138756
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138756
    reference: chr 8
allele count: 3
allele frequency: 2.541209954766463e-5
allele num: 118054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.341A>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.601A>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.290A>C
  hgvsp: ENSP00000434485.1:p.His97Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.326A>C
  hgvsp: ENSP00000354316.6:p.His109Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.430A>C
  hgvsp: ENSP00000435024.1:p.Thr144Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.506A>C
  hgvsp: ENSP00000435119.1:p.His169Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.506A>C
  hgvsp: ENSP00000434544.1:p.His169Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.828A>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.506A>C
  hgvsp: ENSP00000347206.4:p.His169Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.250A>C
  hgvsp: ENSP00000431233.1:p.Thr84Pro
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11882
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His169Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/8-145138760-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138760
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138760
    reference: chr 8
allele count: 1
allele frequency: 8.417508417508417e-6
allele num: 118800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.510C>A
  hgvsp: ENSP00000435119.1:p.Phe170Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.294C>A
  hgvsp: ENSP00000434485.1:p.Phe98Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.510C>A
  hgvsp: ENSP00000347206.4:p.Phe170Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.832C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.254C>A
  hgvsp: ENSP00000431233.1:p.Ser85Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.510C>A
  hgvsp: ENSP00000434544.1:p.Phe170Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.330C>A
  hgvsp: ENSP00000354316.6:p.Phe110Leu
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.605C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.345C>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.434C>A
  hgvsp: ENSP00000435024.1:p.Ser145Tyr
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4491
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe170Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS

8-145138762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138762
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138762
    reference: chr 8
allele count: 1
allele frequency: 8.408448809363649e-6
allele num: 118928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.436G>A
  hgvsp: ENSP00000435024.1:p.Gly146Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.512G>A
  hgvsp: ENSP00000347206.4:p.Arg171Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.512G>A
  hgvsp: ENSP00000434544.1:p.Arg171Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.296G>A
  hgvsp: ENSP00000434485.1:p.Arg99Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.256G>A
  hgvsp: ENSP00000431233.1:p.Gly86Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.332G>A
  hgvsp: ENSP00000354316.6:p.Arg111Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.607G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.347G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.512G>A
  hgvsp: ENSP00000435119.1:p.Arg171Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.834G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg171Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

8-145138764-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138764
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138764
    reference: chr 8
allele count: 2
allele frequency: 1.679289324757762e-5
allele num: 119098
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514G>C
  hgvsp: ENSP00000347206.4:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298G>C
  hgvsp: ENSP00000434485.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438G>C
  hgvsp: ENST00000529503.1:c.438G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258G>C
  hgvsp: ENST00000530633.1:c.258G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514G>C
  hgvsp: ENSP00000435119.1:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514G>C
  hgvsp: ENSP00000434544.1:p.Glu172Gln
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334G>C
  hgvsp: ENSP00000354316.6:p.Gly112Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly172Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

8-145138764-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138764
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138764
    reference: chr 8
allele count: 1
allele frequency: 8.396446623788812e-6
allele num: 119098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514G>T
  hgvsp: ENSP00000434544.1:p.Glu172Ter
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514G>T
  hgvsp: ENSP00000435119.1:p.Gly172Trp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438G>T
  hgvsp: ENST00000529503.1:c.438G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298G>T
  hgvsp: ENSP00000434485.1:p.Gly100Trp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334G>T
  hgvsp: ENSP00000354316.6:p.Gly112Trp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514G>T
  hgvsp: ENSP00000347206.4:p.Gly172Trp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258G>T
  hgvsp: ENST00000530633.1:c.258G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu172Ter
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

8-145138773-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138773
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138773
    reference: chr 8
allele count: 1
allele frequency: 8.379981899239097e-6
allele num: 119332
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836+9C>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334+9C>G
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

8-145138776-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138776
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138776
    reference: chr 8
allele count: 2
allele frequency: 1.674340728338217e-5
allele num: 119450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258+12G>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514+12G>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

8-145138784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138784
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138784
    reference: chr 8
allele count: 1
allele frequency: 8.363161944267889e-6
allele num: 119572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836+20G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334+20G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12202
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4536
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

8-145138794-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138794
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138794
    reference: chr 8
allele count: 1
allele frequency: 8.340005337603416e-6
allele num: 119904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609+30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349+30G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

8-145138795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138795
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138795
    reference: chr 8
allele count: 4
allele frequency: 3.335835209740639e-5
allele num: 119910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.258+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.514+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.609+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.349+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.514+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.334+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.836+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.298+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.438+31G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.514+31G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15566
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-145138835-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138835
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138835
    reference: chr 8
allele count: 2
allele frequency: 1.659392994042779e-5
allele num: 120526
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-49C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.299-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.335-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.350-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.515-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.515-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.439-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.610-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.259-7C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.837-7C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4573
  bin: 8.25e1
  variant carriers: 0
hgvs: c.515-7C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

8-145138836-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138836
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138836
    reference: chr 8
allele count: 7
allele frequency: 5.807490002820781e-5
allele num: 120534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.259-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.299-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.515-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.350-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.335-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.610-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.439-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.515-6C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-48C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.837-6C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12328
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: c.515-6C>T
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

8-145138843-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138843
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138843
    reference: chr 8
allele count: 1
allele frequency: 8.293386853323161e-6
allele num: 120578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.260G>A
  hgvsp: ENSP00000431233.1:p.Gly87Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.838G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-41G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.516G>A
  hgvsp: ENST00000528073.1:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.516G>A
  hgvsp: ENST00000355091.4:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.440G>A
  hgvsp: ENSP00000435024.1:p.Gly147Asp
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.300G>A
  hgvsp: ENST00000525087.1:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.336G>A
  hgvsp: ENST00000361036.6:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.351G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.611G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly87Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

8-145138849-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138849
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138849
    reference: chr 8
allele count: 2
allele frequency: 1.657962364254331e-5
allele num: 120630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.342T>A
  hgvsp: ENST00000361036.6:c.342T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.522T>A
  hgvsp: ENST00000355091.4:c.522T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.446T>A
  hgvsp: ENSP00000435024.1:p.Phe149Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.617T>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.266T>A
  hgvsp: ENSP00000431233.1:p.Phe89Tyr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.522T>A
  hgvsp: ENST00000528073.1:c.522T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.306T>A
  hgvsp: ENST00000525087.1:c.306T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.357T>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-35T>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.844T>A
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12236
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Phe89Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

8-145138852-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138852
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138852
    reference: chr 8
allele count: 3
allele frequency: 2.486654951758894e-5
allele num: 120644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.847T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.525T>C
  hgvsp: ENST00000528073.1:c.525T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.525T>C
  hgvsp: ENST00000355091.4:c.525T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.309T>C
  hgvsp: ENST00000525087.1:c.309T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.345T>C
  hgvsp: ENST00000361036.6:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-32T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.269T>C
  hgvsp: ENSP00000431233.1:p.Ile90Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.449T>C
  hgvsp: ENSP00000435024.1:p.Ile150Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.620T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.360T>C
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile90Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

8-145138854-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138854
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138854
    reference: chr 8
allele count: 2
allele frequency: 1.657632569164719e-5
allele num: 120654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.849G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.311G>C
  hgvsp: ENSP00000434485.1:p.Trp104Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.527G>C
  hgvsp: ENSP00000347206.4:p.Trp176Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.527G>C
  hgvsp: ENSP00000435119.1:p.Trp176Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.347G>C
  hgvsp: ENSP00000354316.6:p.Trp116Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.271G>C
  hgvsp: ENSP00000431233.1:p.Gly91Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.622G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-30G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.451G>C
  hgvsp: ENSP00000435024.1:p.Gly151Arg
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.362G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14911
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7749
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp176Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

8-145138857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138857
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138857
    reference: chr 8
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.314C>T
  hgvsp: ENSP00000434485.1:p.Ala105Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.625C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.530C>T
  hgvsp: ENSP00000347206.4:p.Ala177Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.350C>T
  hgvsp: ENSP00000354316.6:p.Ala117Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.454C>T
  hgvsp: ENSP00000435024.1:p.Pro152Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.852C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.274C>T
  hgvsp: ENSP00000431233.1:p.Pro92Ser
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.530C>T
  hgvsp: ENSP00000435119.1:p.Ala177Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-27C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.365C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala177Val
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

8-145138864-TATC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138864
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138861
    reference: chr 8
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.462_464delATC
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.322_324delATC
  hgvsp: ENSP00000434485.1:p.Ile108del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.538_540delATC
  hgvsp: ENSP00000347206.4:p.Ile180del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.358_360delATC
  hgvsp: ENSP00000354316.6:p.Ile120del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.860_862delATC
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.633_635delATC
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.282_284delATC
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.373_375delATC
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-19_515-17delATC
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.538_540delATC
  hgvsp: ENSP00000435119.1:p.Ile180del
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile180del
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: TATC
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

8-145138866-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138866
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138866
    reference: chr 8
allele count: 13
allele frequency: 1.077211183109329e-4
allele num: 120682
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.374T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.539T>C
  hgvsp: ENSP00000347206.4:p.Ile180Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.359T>C
  hgvsp: ENSP00000354316.6:p.Ile120Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.283T>C
  hgvsp: ENSP00000431233.1:p.Ser95Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.323T>C
  hgvsp: ENSP00000434485.1:p.Ile108Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.539T>C
  hgvsp: ENSP00000435119.1:p.Ile180Thr
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.463T>C
  hgvsp: ENSP00000435024.1:p.Ser155Pro
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.634T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-18T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.861T>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile180Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

8-145138868-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138868
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138868
    reference: chr 8
allele count: 74
allele frequency: 6.131715886115806e-4
allele num: 120684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.863G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.285G>A
  hgvsp: ENST00000530633.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.541G>A
  hgvsp: ENSP00000435119.1:p.Val181Ile
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.465G>A
  hgvsp: ENST00000529503.1:c.465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.376G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.325G>A
  hgvsp: ENSP00000434485.1:p.Val109Ile
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.361G>A
  hgvsp: ENSP00000354316.6:p.Val121Ile
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-16G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.636G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.541G>A
  hgvsp: ENSP00000347206.4:p.Val181Ile
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4600
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12336
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 7529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val181Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

8-145138870-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138870
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138870
    reference: chr 8
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.363C>T
  hgvsp: ENST00000361036.6:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.467C>T
  hgvsp: ENSP00000435024.1:p.Ser156Phe
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-14C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.327C>T
  hgvsp: ENST00000525087.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.378C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.543C>T
  hgvsp: ENST00000528073.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.543C>T
  hgvsp: ENST00000355091.4:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.287C>T
  hgvsp: ENSP00000431233.1:p.Ser96Phe
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.638C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.865C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser96Phe
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

8-145138879-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138879
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138879
    reference: chr 8
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.874A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.372A>G
  hgvsp: ENST00000361036.6:c.372A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.552A>G
  hgvsp: ENST00000355091.4:c.552A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.476A>G
  hgvsp: ENST00000529503.1:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.336A>G
  hgvsp: ENST00000525087.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.296A>G
  hgvsp: ENST00000530633.1:c.296A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.387A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.647A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.515-5A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.552A>G
  hgvsp: ENST00000528073.1:c.552A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.25e1
  variant carriers: 0
hgvs: c.515-5A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

8-145138892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138892
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138892
    reference: chr 8
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.887C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.523C>T
  hgvsp: ENSP00000434544.1:p.Leu175Phe
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.1C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.385C>T
  hgvsp: ENSP00000354316.6:p.Leu129Phe
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.660C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.400C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.565C>T
  hgvsp: ENSP00000347206.4:p.Leu189Phe
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.565C>T
  hgvsp: ENSP00000435119.1:p.Leu189Phe
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.349C>T
  hgvsp: ENSP00000434485.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu189Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

8-145138897-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138897
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138897
    reference: chr 8
allele count: 2
allele frequency: 1.657028285472833e-5
allele num: 120698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.528G>C
  hgvsp: ENST00000524418.1:c.528G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.570G>C
  hgvsp: ENST00000355091.4:c.570G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.405G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.390G>C
  hgvsp: ENST00000361036.6:c.390G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.354G>C
  hgvsp: ENST00000525087.1:c.354G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.892G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.570G>C
  hgvsp: ENST00000528073.1:c.570G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.6G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.665G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu190Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-145138905-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138905
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138905
    reference: chr 8
allele count: 3
allele frequency: 2.485707183693761e-5
allele num: 120690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.14A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.536A>G
  hgvsp: ENSP00000434544.1:p.Glu179Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.413A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*25A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.900A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.398A>G
  hgvsp: ENSP00000354316.6:p.Glu133Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.362A>G
  hgvsp: ENSP00000434485.1:p.Glu121Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*25A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.673A>G
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.578A>G
  hgvsp: ENSP00000435119.1:p.Glu193Gly
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.578A>G
  hgvsp: ENSP00000347206.4:p.Glu193Gly
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu193Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

8-145138920-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138920
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138920
    reference: chr 8
allele count: 5
allele frequency: 4.143669302040343e-5
allele num: 120666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.915C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.551C>T
  hgvsp: ENSP00000434544.1:p.Ala184Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.29C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.377C>T
  hgvsp: ENSP00000434485.1:p.Ala126Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.413C>T
  hgvsp: ENSP00000354316.6:p.Ala138Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.593C>T
  hgvsp: ENSP00000435119.1:p.Ala198Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.688C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.593C>T
  hgvsp: ENSP00000347206.4:p.Ala198Val
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.428C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15986
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala198Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

8-145138927-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138927
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138927
    reference: chr 8
allele count: 4
allele frequency: 3.315045333244932e-5
allele num: 120662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.922C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*47C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*47C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.420C>T
  hgvsp: ENST00000361036.6:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.600C>T
  hgvsp: ENST00000355091.4:c.600C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.558C>T
  hgvsp: ENST00000524418.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.36C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.600C>T
  hgvsp: ENST00000528073.1:c.600C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.384C>T
  hgvsp: ENST00000525087.1:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.435C>T
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.695C>T
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His200His
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

8-145138928-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138928
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138928
    reference: chr 8
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.696G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*48G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.601G>A
  hgvsp: ENSP00000435119.1:p.Asp201Asn
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.436G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.421G>A
  hgvsp: ENSP00000354316.6:p.Asp141Asn
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.559G>A
  hgvsp: ENSP00000434544.1:p.Asp187Asn
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*48G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.601G>A
  hgvsp: ENSP00000347206.4:p.Asp201Asn
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.923G>A
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.385G>A
  hgvsp: ENSP00000434485.1:p.Asp129Asn
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.37G>A
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp201Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

8-145138928-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138928
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138928
    reference: chr 8
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*48G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.421G>C
  hgvsp: ENSP00000354316.6:p.Asp141His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.601G>C
  hgvsp: ENSP00000435119.1:p.Asp201His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.601G>C
  hgvsp: ENSP00000347206.4:p.Asp201His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.696G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.559G>C
  hgvsp: ENSP00000434544.1:p.Asp187His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.385G>C
  hgvsp: ENSP00000434485.1:p.Asp129His
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.37G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.436G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.923G>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*48G>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15980
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp201His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

8-145138928-GATGTCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138928
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138922
    reference: chr 8
allele count: 5
allele frequency: 4.143944040179681e-5
allele num: 120658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.703_708delATGTCA
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*55_*60delATGTCA
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.443_448delATGTCA
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.428_433delATGTCA
  hgvsp: ENSP00000354316.6:p.Asn143_Val144del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.566_571delATGTCA
  hgvsp: ENSP00000434544.1:p.Asn189_Val190del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*55_*60delATGTCA
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.608_613delATGTCA
  hgvsp: ENSP00000347206.4:p.Asn203_Val204del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.608_613delATGTCA
  hgvsp: ENSP00000435119.1:p.Asn203_Val204del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.44_49delATGTCA
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.392_397delATGTCA
  hgvsp: ENSP00000434485.1:p.Asn131_Val132del
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.930_935delATGTCA
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn203_Val204del
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: GATGTCA
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

8-145138930-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138930
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 145138930
    reference: chr 8
allele count: 3
allele frequency: 2.486531288852051e-5
allele num: 120650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000526233
  gene symbol: GPAA1
  hgvsc: ENST00000526233.1:n.39T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435024
  ensembl transcript: ENST00000529503
  gene symbol: GPAA1
  hgvsc: ENST00000529503.1:c.*50T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000354316
  ensembl transcript: ENST00000361036
  gene symbol: GPAA1
  hgvsc: ENST00000361036.6:c.423T>C
  hgvsp: ENST00000361036.6:c.423T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000435119
  ensembl transcript: ENST00000528073
  gene symbol: GPAA1
  hgvsc: ENST00000528073.1:c.603T>C
  hgvsp: ENST00000528073.1:c.603T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434544
  ensembl transcript: ENST00000524418
  gene symbol: GPAA1
  hgvsc: ENST00000524418.1:c.561T>C
  hgvsp: ENST00000524418.1:c.561T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000532758
  gene symbol: GPAA1
  hgvsc: ENST00000532758.1:n.925T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000434485
  ensembl transcript: ENST00000525087
  gene symbol: GPAA1
  hgvsc: ENST00000525087.1:c.387T>C
  hgvsp: ENST00000525087.1:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000431233
  ensembl transcript: ENST00000530633
  gene symbol: GPAA1
  hgvsc: ENST00000530633.1:c.*50T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000527144
  gene symbol: GPAA1
  hgvsc: ENST00000527144.1:n.438T>C
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197858
  ensembl protein: ENSP00000347206
  ensembl transcript: ENST00000355091
  gene symbol: GPAA1
  hgvsc: ENST00000355091.4:c.603T>C
  hgvsp: ENST00000355091.4:c.603T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4446
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197858
  ensembl transcript: ENST00000525308
  gene symbol: GPAA1
  hgvsc: ENST00000525308.1:n.698T>C
  variant of: http://identifiers.org/hgnc/4446
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp201Asp
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

8-145138935-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 145138935
allele count: 4
allele frequency: 3.316034685722813e-5
allele num: 120626
alternate allele: G
canonical: true
consequence: missense
filter: PASS
hgvs: p.Asn203Ser
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 1017
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1032
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4801
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4009
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3765
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4305
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12095
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.781173164734808e-5
allele num: 11388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.380073800738008e-5
allele num: 13550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.252772988973099e-5
allele num: 61486
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.975e0

QD
type: SiteQuality
SIO_000300: 1.116e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.716017e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

GenotypeDepth
all individuals: 114
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4043
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3790
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14605
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4818
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12102
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

FS
type: SiteQuality
SIO_000300: 1.309e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e0

DP
type: SiteQuality
SIO_000300: 1.721231e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 9.82e0

GenotypeDepth
all individuals: 31
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7101
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 814
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3854
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6649
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4349
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15915
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610305958132045e-5
allele num: 62100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.802e-1

QD
type: SiteQuality
SIO_000300: 1.375e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.258e0

FS
type: SiteQuality
SIO_000300: 4.696e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 1.743657e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

GenotypeDepth
all individuals: 59
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 14518
bin: 2.25e1
variant carriers: 9

GenotypeDepth
all individuals: 118
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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VQSLOD
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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East Asian
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South Asian
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Latino
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Latino
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South Asian
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Other
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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Other
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European (Finnish)
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ReadPosRankSum
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QD
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InbreedingCoeff
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DP
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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Other
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Latino
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South Asian
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MQ
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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Other
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East Asian
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Latino
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European (Non-Finnish)
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MQ
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QD
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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African
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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MQ
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DP
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InbreedingCoeff
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GenotypeDepth
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bin: 5.75e1
variant carriers: 0

GenotypeDepth
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bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.131733816206428e-4
allele num: 8836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.016e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
SIO_000300: 1.782598e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178411501296253e-4
allele num: 8486
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.77e-1

BaseQRankSum
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SIO_000300: -1.478e0

MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -1.204e0

VQSLOD
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SIO_000300: -1.172e-1

ReadPosRankSum
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SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 5.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.088e1

DP
type: SiteQuality
SIO_000300: 1.783716e6

GenotypeDepth
all individuals: 25
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4006
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177024482109228e-4
allele num: 8496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573168045810653e-5
allele num: 63566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 8.619999999999999e0

ClippingRankSum
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SIO_000300: 5.38e-1

FS
type: SiteQuality
SIO_000300: 3.167e0

DP
type: SiteQuality
SIO_000300: 1.793267e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

VQSLOD
type: SiteQuality
SIO_000300: -3.668e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
all individuals: 410
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.282196255811031e-5
allele num: 63672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

BaseQRankSum
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SIO_000300: -1.253e0

MQRankSum
type: SiteQuality
SIO_000300: -4.18e-1

DP
type: SiteQuality
SIO_000300: 1.796097e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 1.157e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.353494939985879e-4
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568479829349395e-5
allele num: 63756
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.013e0

InbreedingCoeff
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SIO_000300: -1.1e-3

ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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QD
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-1

DP
type: SiteQuality
SIO_000300: 1.798949e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.566268834382733e-5
allele num: 63846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

FS
type: SiteQuality
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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DP
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SIO_000300: 1.800392e6

InbreedingCoeff
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SIO_000300: -1.4e-3

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562988433885589e-5
allele num: 63980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: 9.94e-1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.123048094940662e-5
allele num: 64040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.948e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

DP
type: SiteQuality
SIO_000300: 1.80405e6

FS
type: SiteQuality
SIO_000300: 1.3911e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175088131609871e-4
allele num: 8510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64106
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2726e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.461e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.805e0

DP
type: SiteQuality
SIO_000300: 1.805567e6

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558263471187709e-5
allele num: 64174
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

QD
type: SiteQuality
SIO_000300: 1.488e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.725e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.46e-1

DP
type: SiteQuality
SIO_000300: 1.80654e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.11100049776008e-5
allele num: 64288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.807871e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7096
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12165
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

BaseQRankSum
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SIO_000300: 2.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e0

FS
type: SiteQuality
SIO_000300: 1.882e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.313e1

DP
type: SiteQuality
SIO_000300: 1.809235e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.757711164897909e-5
allele num: 64452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-1

FS
type: SiteQuality
SIO_000300: 9.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
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SIO_000300: -1.43e0

DP
type: SiteQuality
SIO_000300: 1.810965e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.398e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.02e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.065e0

DP
type: SiteQuality
SIO_000300: 1.813657e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -3.353e-1

QD
type: SiteQuality
SIO_000300: 6.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546933976857868e-5
allele num: 64644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.814573e6

MQ
type: SiteQuality
SIO_000300: 5.884e1

FS
type: SiteQuality
SIO_000300: 1.114e0

MQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.02e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.386e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.593e-1

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4091
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3337
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12188
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4449
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18032
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.072041166380789e-4
allele num: 9328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.923e1

DP
type: SiteQuality
SIO_000300: 1.816992e6

MQRankSum
type: SiteQuality
SIO_000300: -1.476e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

FS
type: SiteQuality
SIO_000300: 3.333e0

QD
type: SiteQuality
SIO_000300: 1.142e1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.266e0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5052
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4457
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.254403553690965e-5
allele num: 64834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

QD
type: SiteQuality
SIO_000300: 1.315e1

VQSLOD
type: SiteQuality
SIO_000300: 8.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.819102e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
all individuals: 5057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12196
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 353
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2434
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variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
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variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4107
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4461
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.06700810926163e-4
allele num: 9372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.819777e6

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.195e0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3341
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5068
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2435
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.067463706233988e-4
allele num: 9368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64860
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.246e0

FS
type: SiteQuality
SIO_000300: 3.274e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

QD
type: SiteQuality
SIO_000300: 6.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 1.820306e6

VQSLOD
type: SiteQuality
SIO_000300: -2.139e0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5062
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7198
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4461
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3342
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4111
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12197
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 5.168e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.098e0

DP
type: SiteQuality
SIO_000300: 1.82079e6

QD
type: SiteQuality
SIO_000300: 1.058e1

GenotypeQuality
all individuals: 288
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7231
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5065
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variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 252
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 399
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GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12205
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3339
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4466
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.2306177701206e-4
allele num: 65008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

DP
type: SiteQuality
SIO_000300: 1.823713e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.159e1

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 4114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1525
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 290
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variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 5053
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variant carriers: 0

GenotypeQuality
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
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variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7102
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539456264047538e-5
allele num: 64958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 1.179e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.59e-1

FS
type: SiteQuality
SIO_000300: 2.369e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.991e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.825853e6

MQRankSum
type: SiteQuality
SIO_000300: -4.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.72e-1

GenotypeQuality
all individuals: 424
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 320
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5059
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
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GenotypeQuality
all individuals: 17416
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7122
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536712050895903e-5
allele num: 65074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.276e0

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

FS
type: SiteQuality
SIO_000300: 2.432e0

DP
type: SiteQuality
SIO_000300: 1.826612e6

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
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GenotypeQuality
all individuals: 4471
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7122
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17416
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.826612e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 2.432e0

QD
type: SiteQuality
SIO_000300: 1.269e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.276e0

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 285
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 3.25e1
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GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4470
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65056
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.203e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 1.827475e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

GenotypeQuality
all individuals: 267
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 215
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 284
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 511
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 490
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 11877
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1204
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 362
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 3298
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 318
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 341
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6963
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1407
bin: 2.25e1
variant carriers: 8

GenotypeQuality
all individuals: 16488
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5003
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 3.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.656177542232527e-3
allele num: 6038
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175917215428034e-4
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 5.841674823960339e-4
allele num: 63338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.468275245755138e-4
allele num: 8952
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21300339640951e-4
allele num: 16488
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.7e-1

DP
type: SiteQuality
SIO_000300: 1.848962e6

MQRankSum
type: SiteQuality
SIO_000300: 3.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: -1.061e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.385e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 1.48611e2

GenotypeQuality
all individuals: 12212
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5137
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4191
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17102
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variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.606429192006951e-4
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 1.840963e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.936e0

QD
type: SiteQuality
SIO_000300: 1.175e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.69e-1

GenotypeQuality
all individuals: 142
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
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variant carriers: 0

GenotypeQuality
all individuals: 1323
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variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 12175
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variant carriers: 3

GenotypeQuality
all individuals: 241
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 534
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variant carriers: 0

GenotypeQuality
all individuals: 363
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GenotypeQuality
all individuals: 4167
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variant carriers: 0

GenotypeQuality
all individuals: 272
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GenotypeQuality
all individuals: 182
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variant carriers: 0

GenotypeQuality
all individuals: 16817
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7180
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variant carriers: 0

GenotypeQuality
all individuals: 5087
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variant carriers: 0

GenotypeQuality
all individuals: 441
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variant carriers: 0

GenotypeQuality
all individuals: 4477
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.557632398753894e-4
allele num: 6420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.083279375944255e-5
allele num: 64866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.21456e2

VQSLOD
type: SiteQuality
SIO_000300: -7.031999999999999e1

QD
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.417e0

MQ
type: SiteQuality
SIO_000300: 5.86e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.457e0

DP
type: SiteQuality
SIO_000300: 1.840573e6

GenotypeQuality
all individuals: 540
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7269
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
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variant carriers: 0

GenotypeQuality
all individuals: 17315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531299767242435e-5
allele num: 65304
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.841673e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.14e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.095e0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

QD
type: SiteQuality
SIO_000300: 8.01e0

FS
type: SiteQuality
SIO_000300: 1.281e0

GenotypeDepth
all individuals: 153
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 217
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 88
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GenotypeQuality
all individuals: 4488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 7326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 2.75e1
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GenotypeQuality
all individuals: 1246
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4199
bin: 7.25e1
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GenotypeQuality
all individuals: 12184
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.846245e6

VQSLOD
type: SiteQuality
SIO_000300: -1.113e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.004e0

FS
type: SiteQuality
SIO_000300: 4.303e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

QD
type: SiteQuality
SIO_000300: 2.204e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeDepth
all individuals: 296
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

African
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allele frequency: 1.045806316670153e-4
allele num: 9562
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.526531110704036e-5
allele num: 65508
num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 1.75e0

ClippingRankSum
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SIO_000300: -3.53e-1

MQRankSum
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FS
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MQ
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SIO_000300: 5.967e1

VQSLOD
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SIO_000300: 4.78e-1

BaseQRankSum
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SIO_000300: -1.68e-1

DP
type: SiteQuality
SIO_000300: 1.849253e6

InbreedingCoeff
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SIO_000300: 4.5e-3

QD
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SIO_000300: 1.087e1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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QD
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SIO_000300: 1.087e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

DP
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SIO_000300: 1.849253e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522950869604947e-5
allele num: 65662
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 1.855745e6

InbreedingCoeff
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SIO_000300: 1.5e-3

MQRankSum
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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SIO_000300: 5.954e1

BaseQRankSum
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SIO_000300: -1.614e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65738
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.036054703688355e-4
allele num: 9652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.531e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.858551e6

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

InbreedingCoeff
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SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 1.077e0

QD
type: SiteQuality
SIO_000300: 1.085e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.519064256418047e-5
allele num: 65830
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
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SIO_000300: 9.429999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 6.393e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

MQ
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SIO_000300: 6.0e1

VQSLOD
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ClippingRankSum
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SIO_000300: 4.45e-1

QD
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DP
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SIO_000300: 1.863944e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
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allele num: 66054
num of homozygotes: 0

East Asian
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Latino
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allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

European (Finnish)
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allele count: 0
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Other
type: Population
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DP
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
type: SiteQuality
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QD
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.027642374882679e-5
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European (Finnish)
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Latino
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allele frequency: 1.733102253032929e-4
allele num: 11540
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African
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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DP
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MQ
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BaseQRankSum
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VQSLOD
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

East Asian
type: Population
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Latino
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South Asian
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allele frequency: 6.056935190793458e-5
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European (Non-Finnish)
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allele frequency: 1.503081316699233e-5
allele num: 66530
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African
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Other
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DP
type: SiteQuality
SIO_000300: 1.884959e6

BaseQRankSum
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QD
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

FS
type: SiteQuality
SIO_000300: 3.053e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 8.116883116883117e-4
allele num: 8624
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

VQSLOD
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MQ
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SIO_000300: 5.946e1

FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.52e-2

DP
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QD
type: SiteQuality
SIO_000300: 1.835e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
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SIO_000300: -8.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502087902184036e-5
allele num: 66574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

VQSLOD
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SIO_000300: -4.397e-1

ClippingRankSum
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SIO_000300: 1.24e-1

QD
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MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 4.172e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.063e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

DP
type: SiteQuality
SIO_000300: 1.885928e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002191599867904e-5
allele num: 66618
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.98e-1

FS
type: SiteQuality
SIO_000300: 1.3032e1

QD
type: SiteQuality
SIO_000300: 1.302e1

VQSLOD
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SIO_000300: -1.86e0

ReadPosRankSum
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SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 1.886571e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502476361999099e-5
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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SIO_000300: -6.2e-1

BaseQRankSum
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SIO_000300: 4.01e0

FS
type: SiteQuality
SIO_000300: 5.93e-1

ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.367e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

East Asian
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South Asian
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQRankSum
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MQ
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QD
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FS
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VQSLOD
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DP
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66664
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South Asian
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European (Finnish)
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QD
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ReadPosRankSum
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MQRankSum
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DP
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.650016500165002e-4
allele num: 66666
num of homozygotes: 0

African
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.270348837209302e-3
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.099895005249738e-4
allele num: 66670
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European (Finnish)
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allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele num: 11572
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66674
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Other
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South Asian
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DP
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FS
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.914e1

BaseQRankSum
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SIO_000300: 1.27e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66678
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East Asian
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allele frequency: 0.0e0
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African
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European (Finnish)
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num of homozygotes: 0

Other
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MQ
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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DP
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VQSLOD
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QD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.999580058791769e-5
allele num: 66676
num of homozygotes: 0

Other
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European (Finnish)
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East Asian
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Latino
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South Asian
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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MQRankSum
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VQSLOD
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QD
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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South Asian
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allele num: 16512
num of homozygotes: 0

African
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European (Finnish)
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Latino
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East Asian
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Other
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 4
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allele num: 66660
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Other
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.888144e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.774e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

GenotypeDepth
all individuals: 301
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variant carriers: 0

GenotypeQuality
all individuals: 4359
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12273
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.50112528132033e-5
allele num: 66650
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: -4.87e-1

FS
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.887973e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.429999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

QD
type: SiteQuality
SIO_000300: 1.141e1

GenotypeDepth
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 7736
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

FS
type: SiteQuality
SIO_000300: 5.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.278e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 1.88823e6

MQ
type: SiteQuality
SIO_000300: 5.34e1

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 20077
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 7736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.278e0

DP
type: SiteQuality
SIO_000300: 1.88823e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.34e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

FS
type: SiteQuality
SIO_000300: 5.89e-1

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.502325720973501e-5
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.278e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.88823e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.34e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

GenotypeDepth
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7732
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12277
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.478664192949907e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.61e0

DP
type: SiteQuality
SIO_000300: 1.887969e6

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2