5-175811255-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811255
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811255
    reference: chr 5
allele count: 8
allele frequency: 6.624819887709302e-5
allele num: 120758
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*169A>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.514A>C
  hgvsp: ENSP00000373810.5:p.Lys172Gln
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.140A>C
  hgvsp: ENSP00000426392.1:p.Glu47Ala
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.423A>C
  hgvsp: ENSP00000421302.1:p.Arg141Ser
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15270T>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4041T>G
  variant of: http://identifiers.org/hgnc/22042
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3030
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg141Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

5-175811256-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811256
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811256
    reference: chr 5
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4040C>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.422G>C
  hgvsp: ENSP00000421302.1:p.Arg141Thr
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.513G>C
  hgvsp: ENSP00000373810.5:p.Gln171His
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.139G>C
  hgvsp: ENSP00000426392.1:p.Glu47Gln
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15271C>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*168G>C
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31939
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg141Thr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/5-175811261-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811261
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811261
    reference: chr 5
allele count: 6
allele frequency: 4.968944099378882e-5
allele num: 120750
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.417T>G
  hgvsp: ENST00000510123.1:c.417T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*163T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.134T>G
  hgvsp: ENSP00000426392.1:p.Phe45Cys
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15276A>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.508T>G
  hgvsp: ENSP00000373810.5:p.Leu170Val
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4035A>C
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5505
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8796
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31920
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu170Val
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

5-175811263-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811263
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811263
    reference: chr 5
allele count: 5
allele frequency: 4.140581006326808e-5
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.506C>A
  hgvsp: ENSP00000373810.5:p.Ser169Tyr
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15278G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.132C>A
  hgvsp: ENSP00000426392.1:p.Phe44Leu
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.415C>A
  hgvsp: ENSP00000421302.1:p.Leu139Ile
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4033G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*161C>A
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31911
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu139Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

5-175811267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811267
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811267
    reference: chr 5
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.128G>A
  hgvsp: ENSP00000426392.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15282C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.411G>A
  hgvsp: ENST00000510123.1:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.502G>A
  hgvsp: ENSP00000373810.5:p.Asp168Asn
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4029C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*157G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16391
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8796
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31912
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp168Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

5-175811268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811268
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811268
    reference: chr 5
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.501C>T
  hgvsp: ENST00000389158.5:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*156C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.410C>T
  hgvsp: ENSP00000421302.1:p.Ser137Leu
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.127C>T
  hgvsp: ENSP00000426392.1:p.Arg43Ter
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4028G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15283G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31915
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg43Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

5-175811274-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811274
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811274
    reference: chr 5
allele count: 9
allele frequency: 7.453539603140425e-5
allele num: 120748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4022G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.495C>G
  hgvsp: ENSP00000373810.5:p.Asp165Glu
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.121C>G
  hgvsp: ENSP00000426392.1:p.Leu41Val
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15289G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*150C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.404C>G
  hgvsp: ENSP00000421302.1:p.Thr135Ser
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31917
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8796
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr135Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

5-175811276-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811276
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811276
    reference: chr 5
allele count: 4
allele frequency: 3.312794010468429e-5
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4020C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*148G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.119G>A
  hgvsp: ENSP00000426392.1:p.Arg40Lys
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.493G>A
  hgvsp: ENSP00000373810.5:p.Asp165Asn
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.402G>A
  hgvsp: ENST00000510123.1:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15291C>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp165Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

5-175811277-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811277
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811277
    reference: chr 5
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.118A>G
  hgvsp: ENSP00000426392.1:p.Arg40Gly
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.401A>G
  hgvsp: ENSP00000421302.1:p.Lys134Arg
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*147A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4019T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15292T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.492A>G
  hgvsp: ENST00000389158.5:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3586
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31920
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys134Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

5-175811289-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811289
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811289
    reference: chr 5
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15304T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-5A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-5A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4007T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-2A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.480A>G
  hgvsp: ENST00000389158.5:c.480A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31892
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
hgvs: c.108-2A>G
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: QD

5-175811290-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811290
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811290
    reference: chr 5
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-3C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.479C>A
  hgvsp: ENSP00000373810.5:p.Pro160Gln
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-6C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15305G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-6C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4006G>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31873
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8799
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro160Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

5-175811290-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811290
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811290
    reference: chr 5
allele count: 4
allele frequency: 3.313068398297083e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-4006G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15305G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-6C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-6C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.479C>T
  hgvsp: ENSP00000373810.5:p.Pro160Leu
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-3C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5497
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8799
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro160Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

5-175811299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811299
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811299
    reference: chr 5
allele count: 10
allele frequency: 8.284043275842073e-5
allele num: 120714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3997C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-12G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.470G>A
  hgvsp: ENSP00000373810.5:p.Arg157His
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-15G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15314C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-15G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg157His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-175811300-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811300
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811300
    reference: chr 5
allele count: 3
allele frequency: 2.485254158658626e-5
allele num: 120712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3996G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.469C>T
  hgvsp: ENSP00000373810.5:p.Arg157Cys
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-13C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-16C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-16C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15315G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31798
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4442
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg157Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

5-175811300-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811300
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811300
    reference: chr 5
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3996G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.469C>A
  hgvsp: ENSP00000373810.5:p.Arg157Ser
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-16C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-13C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15315G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-16C>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8793
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31798
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg157Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-175811306-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811306
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811306
    reference: chr 5
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-22T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-19T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.463T>G
  hgvsp: ENSP00000373810.5:p.Tyr155Asp
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3990A>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-22T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15321A>C
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31840
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5500
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr155Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-175811306-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811306
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811306
    reference: chr 5
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-22T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-22T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.463T>A
  hgvsp: ENSP00000373810.5:p.Tyr155Asn
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-19T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15321A>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3990A>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 771
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 31840
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8794
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr155Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

5-175811310-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811310
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811310
    reference: chr 5
allele count: 5
allele frequency: 4.143463272341554e-5
allele num: 120672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-23C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.459C>T
  hgvsp: ENST00000389158.5:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-26C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15325G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-26C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3986G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25385
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5505
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  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 8790
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31806
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn153Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

5-175811323-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811323
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811323
    reference: chr 5
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-36G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-39G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.446G>A
  hgvsp: ENSP00000373810.5:p.Arg149Gln
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-39G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15338C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3973C>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4418
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 5498
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genotype quality: GenotypeQuality
  all individuals: 31720
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 4
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genotype quality: GenotypeQuality
  all individuals: 3550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg149Gln
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-175811326-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811326
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811326
    reference: chr 5
allele count: 1
allele frequency: 8.301097405076952e-6
allele num: 120466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.443T>C
  hgvsp: ENSP00000373810.5:p.Ile148Thr
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-42T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3970A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15341A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-42T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-39T>C
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile148Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

5-175811332-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811332
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811332
    reference: chr 5
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3964T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.437A>G
  hgvsp: ENSP00000373810.5:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-45A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-48A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-48A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15347T>C
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8880
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4408
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3534
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5495
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys146Arg
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

5-175811337-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811337
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811337
    reference: chr 5
allele count: 1
allele frequency: 8.328475056217207e-6
allele num: 120070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.580C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15352G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-53C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.432C>G
  hgvsp: ENST00000389158.5:c.432C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3959G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-53C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-50C>G
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5493
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr144Thr
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

5-175811338-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811338
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811338
    reference: chr 5
allele count: 2
allele frequency: 1.666277868497351e-5
allele num: 120028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-51C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-54C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.579C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.431C>A
  hgvsp: ENSP00000373810.5:p.Thr144Asn
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15353G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-54C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3958G>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3506
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr144Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-175811345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811345
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811345
    reference: chr 5
allele count: 1
allele frequency: 8.358827757995218e-6
allele num: 119634
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-61C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-61C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3951G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15360G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.572C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-58C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.424C>T
  hgvsp: ENSP00000373810.5:p.Gln142Ter
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30990
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8565
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln142Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

5-175811349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811349
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811349
    reference: chr 5
allele count: 1
allele frequency: 8.381386616601851e-6
allele num: 119312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-65C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.568C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.420C>T
  hgvsp: ENST00000389158.5:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-65C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-62C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15364G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3947G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr140Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

5-175811352-ATTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811352
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811349
    reference: chr 5
allele count: 1
allele frequency: 8.408448809363649e-6
allele num: 118928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.414_416delGAA
  hgvsp: ENSP00000373810.5:p.Lys138del
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-68_108-66delGAA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-71_394-69delGAA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.562_564delGAA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3939_37-3937delTCT
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-71_*140-69delGAA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15372_133+15374delTCT
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5490
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys138del
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: ATTC
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

5-175811354-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811354
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811354
    reference: chr 5
allele count: 1
allele frequency: 8.41609156707625e-6
allele num: 118820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15369T>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3942T>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.415A>T
  hgvsp: ENSP00000373810.5:p.Asn139Tyr
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-70A>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.563A>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-67A>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-70A>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25062
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30091
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn139Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

5-175811362-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811362
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811362
    reference: chr 5
allele count: 23
allele frequency: 1.955483004302063e-4
allele num: 117618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.555A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15377T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-78A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-75A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.407A>G
  hgvsp: ENSP00000373810.5:p.Asp136Gly
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-78A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3934T>C
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14231
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5509
  bin: 9.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4326
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28883
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp136Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

5-175811365-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811365
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811365
    reference: chr 5
allele count: 2
allele frequency: 1.706368165995495e-5
allele num: 117208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-81G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3931C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.552G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.404G>A
  hgvsp: ENSP00000373810.5:p.Arg135His
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-81G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-78G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.542G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15380C>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4313
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg135His
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

5-175811366-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811366
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811366
    reference: chr 5
allele count: 2
allele frequency: 1.706193482340897e-5
allele num: 117220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.551C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3930G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-79C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-82C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15381G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-82C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.541C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.403C>T
  hgvsp: ENSP00000373810.5:p.Arg135Cys
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5496
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg135Cys
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

5-175811368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811368
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811368
    reference: chr 5
allele count: 1
allele frequency: 8.545693824881643e-6
allele num: 117018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15383G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.401C>T
  hgvsp: ENSP00000373810.5:p.Ala134Val
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3928G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.539C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-84C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-84C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-81C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.549C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5493
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala134Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

5-175811369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811369
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811369
    reference: chr 5
allele count: 3
allele frequency: 2.568361214321182e-5
allele num: 116806
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.538G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15384C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.400G>A
  hgvsp: ENSP00000373810.5:p.Ala134Thr
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.548G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-82G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-85G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3927C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-85G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala134Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-175811380-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811380
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811380
    reference: chr 5
allele count: 1
allele frequency: 8.657858738376825e-6
allele num: 115502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-5C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-96C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-5C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-93C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-96C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3916G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15395G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-5C>G
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8026
  bin: 6.75e1
  variant carriers: 0
hgvs: c.394-5C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

5-175811389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811389
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811389
    reference: chr 5
allele count: 1
allele frequency: 8.710346149155967e-6
allele num: 114806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-14C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-105C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-14C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3907G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-102C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-105C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-14C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15404G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5490
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

5-175811394-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811394
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811393
    reference: chr 5
allele count: 2
allele frequency: 1.751742984269348e-5
allele num: 114172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-20delA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3899delT
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15412delT
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-20delA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-111delA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-108delA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-111delA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-20delA
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5491
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: CT
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

5-175811396-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811396
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811396
    reference: chr 5
allele count: 1
allele frequency: 8.774084862948794e-6
allele num: 113972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3900T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-112A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-21A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-21A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15411T>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-21A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-112A>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-109A>G
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26935
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-175811399-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811399
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811399
    reference: chr 5
allele count: 2
allele frequency: 1.763077628307974e-5
allele num: 113438
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-112T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-115T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-24T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3897A>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-24T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15414A>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-115T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-24T>G
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5491
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26731
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

5-175811405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811405
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811405
    reference: chr 5
allele count: 1
allele frequency: 8.889204949509316e-6
allele num: 112496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3891G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-30C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-30C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-118C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-121C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-30C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-121C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15420G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7894
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3337
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

5-175811408-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811408
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811408
    reference: chr 5
allele count: 1
allele frequency: 8.930325599671364e-6
allele num: 111978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-124T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3888A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-33T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-33T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-121T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-33T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15423A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-124T>C
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25953
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4262
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum

5-175811421-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175811421
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175811421
    reference: chr 5
allele count: 1
allele frequency: 9.034239768723461e-6
allele num: 110690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*140-137G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.394-46G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.542-46G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-134G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3875C>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+15436C>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.394-137G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.532-46G>C
  variant of: http://identifiers.org/hgnc/26934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5487
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2030
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24024
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/5-175812127-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812127
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812127
    reference: chr 5
allele count: 2
allele frequency: 1.965717880169838e-5
allele num: 101744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-840T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+95T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+95T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*35T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+95T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3169A>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16142A>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+95T>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+95T>G
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7935
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24064
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

5-175812127-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812127
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812127
    reference: chr 5
allele count: 1
allele frequency: 9.82858940084919e-6
allele num: 101744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16142A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+95T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+95T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+95T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3169A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*35T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+95T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-840T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+95T>C
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

http://identifiers.org/exac.variant/5-175812130-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812130
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812130
    reference: chr 5
allele count: 2
allele frequency: 1.957981712450806e-5
allele num: 102146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3166C>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-843G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16145C>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+92G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+92G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*32G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+92G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+92G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+92G>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27260
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-175812130-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812130
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812130
    reference: chr 5
allele count: 1
allele frequency: 9.789908562254029e-6
allele num: 102146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+92G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3166C>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+92G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16145C>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-843G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+92G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*32G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+92G>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+92G>C
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27260
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2963
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

5-175812130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812130
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812130
    reference: chr 5
allele count: 22
allele frequency: 2.153779883695886e-4
allele num: 102146
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+92G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*32G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3166C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+92G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-843G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16145C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+92G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+92G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+92G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27260
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

5-175812131-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812131
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812131
    reference: chr 5
allele count: 16
allele frequency: 1.556117486870259e-4
allele num: 102820
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+91C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+91C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-844C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16146G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+91C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3165G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+91C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*31C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+91C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9033
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7026
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29017
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7667
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 8.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

5-175812144-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812144
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812143
    reference: chr 5
allele count: 1
allele frequency: 9.135256609358157e-6
allele num: 109466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*17delC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16161delG
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+77delC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+77delC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3150delG
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+77delC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-858delC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+77delC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+77delC
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: AG
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

5-175812148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812148
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812148
    reference: chr 5
allele count: 1
allele frequency: 8.99005699696136e-6
allele num: 111234
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+74C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-861C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+74C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16163G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+74C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+74C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+74C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3148G>A
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10080
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39579
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-175812149-CTGCGCAAGCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812149
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812139
    reference: chr 5
allele count: 5
allele frequency: 4.475314167054527e-5
allele num: 111724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*3_*12delTGCTTGCGCA
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10293
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37789
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40083
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: CTGCGCAAGCA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

5-175812152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812152
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812152
    reference: chr 5
allele count: 329
allele frequency: 2.9080045255268e-3
allele num: 113136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+70G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3144C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-865G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+70G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+70G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+70G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+70G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16167C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10721
  bin: 2.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38317
  bin: 2.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 3.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 8
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

5-175812153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812153
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812153
    reference: chr 5
allele count: 1
allele frequency: 8.778398117911443e-6
allele num: 113916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+69C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-866C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3143G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+69C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16168G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+69C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+69C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+69C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-175812157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812157
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812157
    reference: chr 5
allele count: 1
allele frequency: 8.647676369359553e-6
allele num: 115638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3139G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-870C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16172G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*5C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+65C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+65C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+65C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+65C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+65C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11500
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2557
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

5-175812160-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812160
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812160
    reference: chr 5
allele count: 2
allele frequency: 1.712123546835139e-5
allele num: 116814
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*2C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+62C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+62C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-873C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+62C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+62C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3136G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+62C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16175G>C
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

5-175812160-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812160
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812161
    reference: chr 5
allele count: 5
allele frequency: 4.280308867087849e-5
allele num: 116814
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+61dupT
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+61dupT
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3135dupA
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+61dupT
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*1dupT
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-874dupT
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+61dupT
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16176dupA
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+61dupT
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39489
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11875
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

5-175812161-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812161
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812161
    reference: chr 5
allele count: 1
allele frequency: 8.545109633756601e-6
allele num: 117026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.*1T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+61T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16176A>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+61T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+61T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3135A>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+61T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-874T>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+61T>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

5-175812164-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812164
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812164
    reference: chr 5
allele count: 1
allele frequency: 8.49314603115286e-6
allele num: 117742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+58T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16179A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-877T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.451T>C
  hgvsp: ENSP00000427489.1:p.Ter151ArgextTer9
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3132A>G
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+58T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+58T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+58T>C
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+58T>C
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ter151ArgextTer9
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-175812168-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812168
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812168
    reference: chr 5
allele count: 3
allele frequency: 2.53074859543453e-5
allele num: 118542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+54G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16183C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+54G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+54G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+54G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+54G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-881G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.447G>A
  hgvsp: ENST00000509257.1:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3128C>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6384
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala149Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-175812169-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812169
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812169
    reference: chr 5
allele count: 2
allele frequency: 1.681604923739217e-5
allele num: 118934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+53C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3127G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.446C>T
  hgvsp: ENSP00000427489.1:p.Ala149Val
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+53C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16184G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+53C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+53C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+53C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-882C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala149Val
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

5-175812169-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812169
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812169
    reference: chr 5
allele count: 1
allele frequency: 8.408024618696084e-6
allele num: 118934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+53C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-882C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+53C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16184G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+53C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+53C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.446C>A
  hgvsp: ENSP00000427489.1:p.Ala149Glu
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+53C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3127G>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala149Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

5-175812170-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812170
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812171
    reference: chr 5
allele count: 2
allele frequency: 1.678781875870868e-5
allele num: 119134
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-884dupC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+51dupC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+51dupC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+51dupC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+51dupC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16186dupG
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3125dupG
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+51dupC
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.444dupC
  hgvsp: ENSP00000427489.1:p.Ala149ArgfsTer25
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala149ArgfsTer25
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-175812170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812170
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812170
    reference: chr 5
allele count: 3
allele frequency: 2.518172813806302e-5
allele num: 119134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-883G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16185C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+52G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.445G>A
  hgvsp: ENSP00000427489.1:p.Ala149Thr
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+52G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3126C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+52G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+52G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+52G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala149Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

5-175812171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812171
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812171
    reference: chr 5
allele count: 23
allele frequency: 1.926040061633282e-4
allele num: 119416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3125G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+51C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+51C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+51C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+51C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16186G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-884C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+51C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.444C>T
  hgvsp: ENST00000509257.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12782
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40052
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe148Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-175812171-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812171
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812171
    reference: chr 5
allele count: 11
allele frequency: 9.211495946941784e-5
allele num: 119416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16186G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+51C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3125G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+51C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+51C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+51C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.444C>G
  hgvsp: ENSP00000427489.1:p.Phe148Leu
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-884C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+51C>G
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12782
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 40052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe148Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

5-175812176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812176
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812176
    reference: chr 5
allele count: 1
allele frequency: 8.344459279038718e-6
allele num: 119840
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+46C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-889C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+46C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3120G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+46C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.439C>T
  hgvsp: ENSP00000427489.1:p.Pro147Ser
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+46C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16191G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+46C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro147Ser
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-175812184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812184
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812184
    reference: chr 5
allele count: 5
allele frequency: 4.158695832986775e-5
allele num: 120230
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+38G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+38G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16199C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.431G>A
  hgvsp: ENSP00000427489.1:p.Arg144His
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+38G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+38G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-897G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3112C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+38G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg144His
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

5-175812189-TCCCAGCCAGCCCAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812189
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812175
    reference: chr 5
allele count: 2
allele frequency: 1.66013679527193e-5
allele num: 120472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsp: ENSP00000427489.1:p.Val138LysfsTer31
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46648
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val138LysfsTer31
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: TCCCAGCCAGCCCAC
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/5-175812199-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812199
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812199
    reference: chr 5
allele count: 2
allele frequency: 1.658237293756736e-5
allele num: 120610
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.416G>T
  hgvsp: ENSP00000427489.1:p.Gly139Val
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+23G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-912G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16214C>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+23G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+23G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+23G>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3097C>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+23G>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly139Val
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

5-175812203-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812203
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812203
    reference: chr 5
allele count: 2
allele frequency: 1.657412778652524e-5
allele num: 120670
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+19G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3093C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+19G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.412G>A
  hgvsp: ENSP00000427489.1:p.Val138Met
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+19G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-916G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16218C>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+19G>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+19G>A
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val138Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-175812204-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812204
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812204
    reference: chr 5
allele count: 4
allele frequency: 3.315100281783524e-5
allele num: 120660
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+18C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16219G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3092G>A
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.411C>T
  hgvsp: ENST00000509257.1:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+18C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+18C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+18C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-917C>T
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+18C>T
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6612
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro137Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

5-175812204-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812204
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812204
    reference: chr 5
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16219G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+18C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.411C>G
  hgvsp: ENST00000509257.1:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3092G>C
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+18C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+18C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+18C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+18C>G
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-917C>G
  variant of: http://identifiers.org/hgnc/26934
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro137Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-175812204-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 175812204
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 175812204
    reference: chr 5
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000426392
  ensembl transcript: ENST00000507413
  gene symbol: NOP16
  hgvsc: ENST00000507413.1:c.108-917C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000503849
  gene symbol: NOP16
  hgvsc: ENST00000503849.1:n.541+18C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000427489
  ensembl transcript: ENST00000509257
  gene symbol: NOP16
  hgvsc: ENST00000509257.1:c.411C>A
  hgvsp: ENST00000509257.1:c.411C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000421302
  ensembl transcript: ENST00000510123
  gene symbol: NOP16
  hgvsc: ENST00000510123.1:c.393+18C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000373810
  ensembl transcript: ENST00000389158
  gene symbol: NOP16
  hgvsc: ENST00000389158.5:c.393+18C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl protein: ENSP00000423835
  ensembl transcript: ENST00000502663
  gene symbol: NOP16
  hgvsc: ENST00000502663.1:c.*139+18C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048162
  ensembl transcript: ENST00000504821
  gene symbol: NOP16
  hgvsc: ENST00000504821.1:n.531+18C>A
  variant of: http://identifiers.org/hgnc/26934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000421449
  ensembl transcript: ENST00000514533
  gene symbol: ARL10
  hgvsc: ENST00000514533.1:c.133+16219G>T
  variant of: http://identifiers.org/hgnc/22042
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175414
  ensembl protein: ENSP00000424831
  ensembl transcript: ENST00000503175
  gene symbol: ARL10
  hgvsc: ENST00000503175.1:c.37-3092G>T
  variant of: http://identifiers.org/hgnc/22042
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6612
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro137Pro
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 4449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8793
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31939
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198825151351675e-4
allele num: 66732
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 9.12e-1

DP
type: SiteQuality
SIO_000300: 1.724977e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 4.213e0

QD
type: SiteQuality
SIO_000300: 1.529e1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5502
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1749
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3030
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8793
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.096e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.223e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 1.72447e6

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.122448979591836e-4
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

QD
type: SiteQuality
SIO_000300: 1.493e1

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.724764e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5505
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.796429399489915e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.219e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

FS
type: SiteQuality
SIO_000300: 4.595e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.724993e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.195e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.05e-1

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5502
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1753
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQRankSum
type: SiteQuality
SIO_000300: -1.941e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.18e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.64e1

DP
type: SiteQuality
SIO_000300: 1.724632e6

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5502
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

QD
type: SiteQuality
SIO_000300: 1.568e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 1.7248e6

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.14e-1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5506
bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4450
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.725077e6

MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5500
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 8793
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.318e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 2.2028e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.913e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.355e1

DP
type: SiteQuality
SIO_000300: 1.724806e6

GenotypeQuality
all individuals: 5498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4451
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.724687e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.469e-1

QD
type: SiteQuality
SIO_000300: 1.007e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 5494
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.252e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.062e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 1.724556e6

FS
type: SiteQuality
SIO_000300: 4.56e0

QD
type: SiteQuality
SIO_000300: 1.433e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 1.811e0

QD
type: SiteQuality
SIO_000300: 1.38e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

DP
type: SiteQuality
SIO_000300: 1.724783e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 1.811e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.724783e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 5502
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 31778
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239341085271318e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592912705272256e-4
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.04e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.224e1

DP
type: SiteQuality
SIO_000300: 1.724878e6

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8793
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5499
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

DP
type: SiteQuality
SIO_000300: 1.724473e6

FS
type: SiteQuality
SIO_000300: 1.0685e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

QD
type: SiteQuality
SIO_000300: 1.438e1

GenotypeQuality
all individuals: 3035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 1.724473e6

FS
type: SiteQuality
SIO_000300: 1.0685e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.438e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeQuality
all individuals: 3573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.012e0

FS
type: SiteQuality
SIO_000300: 4.108e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.132e0

QD
type: SiteQuality
SIO_000300: 1.212e1

DP
type: SiteQuality
SIO_000300: 1.724142e6

GenotypeQuality
all individuals: 3036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.986e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.212e1

DP
type: SiteQuality
SIO_000300: 1.724142e6

FS
type: SiteQuality
SIO_000300: 4.108e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.012e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.132e0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.999340072592015e-5
allele num: 66674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 1.198e0

MQRankSum
type: SiteQuality
SIO_000300: 5.14e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

QD
type: SiteQuality
SIO_000300: 1.348e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.723642e6

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.61e-1

DP
type: SiteQuality
SIO_000300: 1.721049e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQRankSum
type: SiteQuality
SIO_000300: -6.79e-1

FS
type: SiteQuality
SIO_000300: 1.787e0

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

QD
type: SiteQuality
SIO_000300: 1.128e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.61e-1

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5499
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1294
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 4419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090133982947625e-5
allele num: 16420
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.51e0

MQRankSum
type: SiteQuality
SIO_000300: -2.561e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

FS
type: SiteQuality
SIO_000300: 1.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

QD
type: SiteQuality
SIO_000300: 1.353e1

DP
type: SiteQuality
SIO_000300: 1.719081e6

MQ
type: SiteQuality
SIO_000300: 5.907e1

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 8715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31483
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.714588e6

VQSLOD
type: SiteQuality
SIO_000300: -5.72e-2

MQ
type: SiteQuality
SIO_000300: 5.921e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.37e-1

FS
type: SiteQuality
SIO_000300: 3.181e0

MQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

QD
type: SiteQuality
SIO_000300: 1.512e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 9.25e1
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GenotypeQuality
all individuals: 583
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 1.710521e6

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.28e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.53e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8635
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.233197681588359e-4
allele num: 16218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

DP
type: SiteQuality
SIO_000300: 1.70954e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

QD
type: SiteQuality
SIO_000300: 2.028e1

GenotypeQuality
all individuals: 4365
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 3485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509251713000694e-5
allele num: 66258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.73e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.991e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 8.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 1.701718e6

VQSLOD
type: SiteQuality
SIO_000300: -1.49e-2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511990081345066e-5
allele num: 66138
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e-1

DP
type: SiteQuality
SIO_000300: 1.695545e6

FS
type: SiteQuality
SIO_000300: 3.899e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.234e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514142087093453e-5
allele num: 66044
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 8.766999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.749e1

QD
type: SiteQuality
SIO_000300: 1.849e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.687492e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.453278265358803e-5
allele num: 15496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

QD
type: SiteQuality
SIO_000300: 1.207e1

DP
type: SiteQuality
SIO_000300: 1.685033e6

MQRankSum
type: SiteQuality
SIO_000300: -1.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.566e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.198196826170388e-4
allele num: 65662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.661694e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

FS
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.051385328939338e-5
allele num: 65544
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

FS
type: SiteQuality
SIO_000300: 2.861e0

VQSLOD
type: SiteQuality
SIO_000300: -5.377e-1

QD
type: SiteQuality
SIO_000300: 1.078e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.45e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e0

DP
type: SiteQuality
SIO_000300: 1.65482e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.051478441304812e-5
allele num: 65542
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.159999999999999e-1

ReadPosRankSum
type: SiteQuality
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QD
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 1.654186e6

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.526904049349539e-5
allele num: 65492
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11502
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South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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QD
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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East Asian
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.583511581005928e-5
allele num: 65452
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Latino
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
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allele num: 848
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South Asian
type: Population
allele count: 1
allele frequency: 7.49063670411985e-5
allele num: 13350
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 8.669e0

QD
type: SiteQuality
SIO_000300: 1.289e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

DP
type: SiteQuality
SIO_000300: 1.629057e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8005
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.751937984496124e-5
allele num: 12900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.621336e6

VQSLOD
type: SiteQuality
SIO_000300: -6.37e-1

FS
type: SiteQuality
SIO_000300: 1.217e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.002e0

QD
type: SiteQuality
SIO_000300: 1.789e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7980
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variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.102165230187093e-4
allele num: 9514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.076e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.525e0

DP
type: SiteQuality
SIO_000300: 1.616408e6

FS
type: SiteQuality
SIO_000300: 3.203e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5489
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.266e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.909e1

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

DP
type: SiteQuality
SIO_000300: 1.61386e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4270
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64524
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.748251748251748e-4
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11994
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

QD
type: SiteQuality
SIO_000300: 1.078e1

VQSLOD
type: SiteQuality
SIO_000300: 8.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

DP
type: SiteQuality
SIO_000300: 1.609831e6

FS
type: SiteQuality
SIO_000300: 5.344e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.454e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26401
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555548642006035e-5
allele num: 64286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.082e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.421e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 1.603156e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 3.873e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3332
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 366
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.756567425569177e-5
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10992
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.053e0

DP
type: SiteQuality
SIO_000300: 1.597592e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.0e-2

QD
type: SiteQuality
SIO_000300: 1.573e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 2.957e0

MQRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63832
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 804
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East Asian
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.587092e6

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.95e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7026
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 2
allele frequency: 2.43605359317905e-4
allele num: 8210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

QD
type: SiteQuality
SIO_000300: 1.002e1

DP
type: SiteQuality
SIO_000300: 1.120082e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.791922015553883e-5
allele num: 55806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.120082e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 1.002e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7815
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 284
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.42600679281902e-4
allele num: 8244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56058
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.194e1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 2.045e0

DP
type: SiteQuality
SIO_000300: 1.155237e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.717e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 1002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 585
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.077354018530489e-4
allele num: 9282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.155237e6

FS
type: SiteQuality
SIO_000300: 2.045e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.717e0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.194e1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7815
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 9.75e1
variant carriers: 22

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5696
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.154708037060978e-4
allele num: 9282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 2.304706453178069e-3
allele num: 8244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.783866709479468e-5
allele num: 56058
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 1.194e1

FS
type: SiteQuality
SIO_000300: 2.045e0

DP
type: SiteQuality
SIO_000300: 1.155237e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.717e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

GenotypeQuality
all individuals: 4333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4239
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2693
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 14
allele frequency: 1.686340640809443e-3
allele num: 8302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.742767514813524e-4
allele num: 5738
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.067235859124867e-4
allele num: 9370
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.697e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.016e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.179506e6

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 38374
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5377
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.664502813009754e-5
allele num: 60078
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.091e0

DP
type: SiteQuality
SIO_000300: 1.315942e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 7.63e0

GenotypeQuality
all individuals: 5656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4615
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1084
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.275100401606425e-5
allele num: 15936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -4.782e-1

DP
type: SiteQuality
SIO_000300: 1.342752e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.02e0

MQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.034e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.109e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

GenotypeQuality
all individuals: 4388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 297
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1580
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.446438692612885e-5
allele num: 10586
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.430660168365086e-4
allele num: 9028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16004
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

MQRankSum
type: SiteQuality
SIO_000300: -2.065e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.876e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.873e0

FS
type: SiteQuality
SIO_000300: 4.763e0

MQ
type: SiteQuality
SIO_000300: 5.479e1

QD
type: SiteQuality
SIO_000300: 3.14e0

DP
type: SiteQuality
SIO_000300: 1.350592e6

GenotypeQuality
all individuals: 320
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5795
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 390
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 578
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 9.75e1
variant carriers: 316

GenotypeQuality
all individuals: 239
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.721622627465575e-4
allele num: 10748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 319
allele frequency: 1.978171896316508e-2
allele num: 16126
num of homozygotes: 8

African
type: Population
allele count: 1
allele frequency: 1.094091903719913e-4
allele num: 9140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.030580450354951e-5
allele num: 62262
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.524e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

DP
type: SiteQuality
SIO_000300: 1.375707e6

QD
type: SiteQuality
SIO_000300: 1.392e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

MQ
type: SiteQuality
SIO_000300: 6.022e1

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 497
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5930
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.75e1
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GenotypeQuality
all individuals: 1370
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 198
bin: 5.75e1
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GenotypeQuality
all individuals: 1613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1789
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62732
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.08695652173913e-4
allele num: 9200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
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SIO_000300: 1.387651e6

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568479829349395e-5
allele num: 63756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.957e0

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.003e0

InbreedingCoeff
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SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.97e-1

DP
type: SiteQuality
SIO_000300: 1.407907e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64446
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.78858880343409e-4
allele num: 11182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.919e0

MQRankSum
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.543e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.604e1

QD
type: SiteQuality
SIO_000300: 1.24e1

DP
type: SiteQuality
SIO_000300: 1.422223e6

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.942944017170452e-5
allele num: 11182
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.231013327691982e-4
allele num: 9454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.084e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.919e0

QD
type: SiteQuality
SIO_000300: 1.24e1

DP
type: SiteQuality
SIO_000300: 1.422223e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.899e0

MQ
type: SiteQuality
SIO_000300: 5.604e1

FS
type: SiteQuality
SIO_000300: 4.543e0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1020258725897e-5
allele num: 16388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.424109e6

MQ
type: SiteQuality
SIO_000300: 5.869e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.419e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.904e-1

QD
type: SiteQuality
SIO_000300: 1.202e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64962
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.088650754992694e-5
allele num: 16424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.71e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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QD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65458
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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African
type: Population
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allele frequency: 3.123048094940662e-4
allele num: 9606
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South Asian
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allele frequency: 0.0e0
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FS
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BaseQRankSum
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.76731544800982e-5
allele num: 11406
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele num: 65706
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European (Finnish)
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Other
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BaseQRankSum
type: SiteQuality
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MQ
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DP
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.521931026085898e-5
allele num: 65706
num of homozygotes: 0

FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.038497766704142e-5
allele num: 65822
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
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South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: 2.5e-3

ReadPosRankSum
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FS
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VQSLOD
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DP
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ClippingRankSum
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MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -3.218e0

QD
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SIO_000300: 1.518e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.214181641573579e-4
allele num: 16472
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.519248883352071e-5
allele num: 65822
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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VQSLOD
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DP
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QD
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ClippingRankSum
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BaseQRankSum
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SIO_000300: -3.218e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele count: 9
allele frequency: 1.06710931942139e-3
allele num: 8434
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South Asian
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allele frequency: 1.214034235765449e-4
allele num: 16474
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African
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allele count: 8
allele frequency: 8.276432857438444e-4
allele num: 9666
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.621002970470033e-4
allele num: 11446
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ClippingRankSum
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VQSLOD
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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SIO_000300: 5.969e1

QD
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ReadPosRankSum
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SIO_000300: 2.96e-1

BaseQRankSum
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SIO_000300: 4.08e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.666969752076135e-4
allele num: 65988
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

BaseQRankSum
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SIO_000300: 4.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.456599e6

QD
type: SiteQuality
SIO_000300: 1.418e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66230
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 1.030290541932825e-4
allele num: 9706
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
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QD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 3.474635163307853e-4
allele num: 11512
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.504755025881786e-5
allele num: 66456
num of homozygotes: 0

Other
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East Asian
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VQSLOD
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DP
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MQ
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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FS
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 3.004085556356645e-5
allele num: 66576
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Other
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African
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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DP
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.729206294310911e-4
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African
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: -7.05e-1

DP
type: SiteQuality
SIO_000300: 1.473472e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.353e1

FS
type: SiteQuality
SIO_000300: 1.943e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.029e0

VQSLOD
type: SiteQuality
SIO_000300: 3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.877e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeQuality
all individuals: 1008
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46836
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.339e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 1.474267e6

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

GenotypeQuality
all individuals: 1712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021450459652707e-4
allele num: 9790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

FS
type: SiteQuality
SIO_000300: 8.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.339e1

DP
type: SiteQuality
SIO_000300: 1.474267e6

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0