6-168347623-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168347623
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168347623
    reference: chr 6
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3532+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3529+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3481+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3484+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3532+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.613+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3532+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3532+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2122+42C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3553+42C>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-168347626-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168347626
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168347626
    reference: chr 6
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3532+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3532+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3529+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3484+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3553+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3481+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3532+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2122+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.613+45A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3532+45A>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28669
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-168348491-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348491
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348491
    reference: chr 6
allele count: 3
allele frequency: 3.866577305768933e-5
allele num: 77588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-42A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-42A>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9583
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17074
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3809
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD

6-168348491-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348491
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348491
    reference: chr 6
allele count: 1
allele frequency: 1.288859101922978e-5
allele num: 77588
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-42A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-42A>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17074
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

6-168348492-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348492
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348492
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 77564
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-41T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-41T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16068
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

6-168348498-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348498
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348498
    reference: chr 6
allele count: 1
allele frequency: 1.336541031809677e-5
allele num: 74820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-35A>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14093
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13609
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/6-168348501-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348501
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348500
    reference: chr 6
allele count: 12
allele frequency: 1.634877384196185e-4
allele num: 73400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-31delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-31delC
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13836
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11731
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13353
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12069
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AC
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/6-168348502-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348502
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348502
    reference: chr 6
allele count: 2182
allele frequency: 2.97250905920497e-2
allele num: 73406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-31C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-31C>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 3.25e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 2.75e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 7.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.25e1
  variant carriers: 506
genotype depth: GenotypeDepth
  all individuals: 13184
  bin: 1.75e1
  variant carriers: 453
genotype depth: GenotypeDepth
  all individuals: 12861
  bin: 1.25e1
  variant carriers: 284
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 3.75e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 9.75e1
  variant carriers: 2072
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 10711
  bin: 7.5e0
  variant carriers: 2
num of homozygotes: 37
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

6-168348502-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348502
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348502
    reference: chr 6
allele count: 4
allele frequency: 5.449145846388578e-5
allele num: 73406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-31C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-31C>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13184
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12861
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD

6-168348504-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348504
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348503
    reference: chr 6
allele count: 62993
allele frequency: 6.111671679441156e-1
allele num: 103070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-19delT
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.5e0
  variant carriers: 642
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.25e1
  variant carriers: 1643
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.75e1
  variant carriers: 9794
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 3608
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.75e1
  variant carriers: 398
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 953
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 3.75e1
  variant carriers: 3397
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 1.75e1
  variant carriers: 8318
genotype depth: GenotypeDepth
  all individuals: 13812
  bin: 2.25e1
  variant carriers: 10914
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.25e1
  variant carriers: 6293
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 600
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 903
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 1.75e1
  variant carriers: 462
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 3.25e1
  variant carriers: 832
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 5.75e1
  variant carriers: 1553
num of homozygotes: 17057
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: CT
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP

6-168348504-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348504
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348502
    reference: chr 6
allele count: 268
allele frequency: 2.60017463859513e-3
allele num: 103070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-20_614-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-20_3533-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-20_3533-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-20_3533-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-20_3485-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-20_3482-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-20_3554-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-20_3530-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-20_2123-19delTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-20_3533-19delTT
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 1.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 13812
  bin: 2.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 2.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.25e1
  variant carriers: 14
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: CTT
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-168348504-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348504
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348504
    reference: chr 6
allele count: 12
allele frequency: 1.164257300863491e-4
allele num: 103070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-29C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-29C>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13812
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4894
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-168348504-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348504
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348505
    reference: chr 6
allele count: 86
allele frequency: 8.343843989521685e-4
allele num: 103070
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-19dupT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-19dupT
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13812
  bin: 2.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 7.5e0
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 24
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

6-168348507-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348507
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348507
    reference: chr 6
allele count: 1
allele frequency: 8.808244516867789e-6
allele num: 113530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-26T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-26T>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3747
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

6-168348511-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348511
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348511
    reference: chr 6
allele count: 2
allele frequency: 1.678753693258125e-5
allele num: 119136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-22T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-22T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17970
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4496
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

6-168348511-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348511
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348511
    reference: chr 6
allele count: 1
allele frequency: 8.393768466290626e-6
allele num: 119136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-22T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-22T>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17970
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8284
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-168348513-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348513
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348511
    reference: chr 6
allele count: 7
allele frequency: 5.885518261922378e-5
allele num: 118936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-19_3533-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-19_614-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-19_3533-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-19_3530-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-19_3533-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-19_3485-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-19_3482-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-19_3554-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-19_2123-18delTC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-19_3533-18delTC
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8556
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18484
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18440
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: TTC
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

6-168348514-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348514
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348514
    reference: chr 6
allele count: 107
allele frequency: 9.107468123861566e-4
allele num: 117486
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18877
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17973
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 6
  allele frequency: 7.129277566539924e-4
  allele num: 8416
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 2
  allele frequency: 3.063725490196078e-4
  allele num: 6528
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 64
  allele frequency: 9.911723710701564e-4
  allele num: 64570
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 6
  allele frequency: 3.784056508577195e-4
  allele num: 15856
  num of homozygotes: 0
population: Other
population: Latino
population: African
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

6-168348514-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348514
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348515
    reference: chr 6
allele count: 3
allele frequency: 2.553495735662121e-5
allele num: 117486
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-13dupC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-13dupC
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18877
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4925
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

6-168348514-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348514
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348513
    reference: chr 6
allele count: 483
allele frequency: 4.111128134416015e-3
allele num: 117486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-13delC
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-13delC
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18877
  bin: 2.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 3.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17973
  bin: 2.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 1.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 2
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: TC
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-168348520-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348520
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348519
    reference: chr 6
allele count: 2
allele frequency: 1.660853678790898e-5
allele num: 120420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-12delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-12delT
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8787
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: CT
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-168348522-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348522
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348522
    reference: chr 6
allele count: 2
allele frequency: 1.658429798666623e-5
allele num: 120596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-11G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-11G>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-168348524-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348524
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348524
    reference: chr 6
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3530-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3554-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3533-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3533-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2123-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3533-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.614-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3485-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3482-9C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3533-9C>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

6-168348545-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348545
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348545
    reference: chr 6
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3545G>C
  hgvsp: ENSP00000355771.2:p.Ser1182Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3545G>C
  hgvsp: ENSP00000404595.2:p.Ser1182Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.626G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3545G>C
  hgvsp: ENSP00000375956.3:p.Ser1182Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3545G>C
  hgvsp: ENSP00000341118.4:p.Ser1182Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3542G>C
  hgvsp: ENSP00000383623.3:p.Ser1181Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2135G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3494G>C
  hgvsp: ENSP00000375960.1:p.Ser1165Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3497G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3566G>C
  hgvsp: ENSP00000252692.5:p.Ser1189Thr
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser1182Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

6-168348549-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348549
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348549
    reference: chr 6
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3501T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3549T>C
  hgvsp: ENST00000344191.4:c.3549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3570T>C
  hgvsp: ENST00000351017.4:c.3570T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3498T>C
  hgvsp: ENST00000392112.1:c.3498T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3549T>C
  hgvsp: ENST00000447894.2:c.3549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2139T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3549T>C
  hgvsp: ENST00000392108.3:c.3549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3546T>C
  hgvsp: ENST00000400822.3:c.3546T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3549T>C
  hgvsp: ENST00000366806.2:c.3549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.630T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro1183Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

6-168348552-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348552
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348552
    reference: chr 6
allele count: 5
allele frequency: 4.123575304732215e-5
allele num: 121254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3549A>T
  hgvsp: ENST00000400822.3:c.3549A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3504A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3552A>T
  hgvsp: ENST00000447894.2:c.3552A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.633A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3552A>T
  hgvsp: ENST00000366806.2:c.3552A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3552A>T
  hgvsp: ENST00000344191.4:c.3552A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3501A>T
  hgvsp: ENST00000392112.1:c.3501A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2142A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3552A>T
  hgvsp: ENST00000392108.3:c.3552A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3573A>T
  hgvsp: ENST00000351017.4:c.3573A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly1184Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

6-168348559-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348559
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348559
    reference: chr 6
allele count: 299
allele frequency: 2.464759706536971e-3
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3559A>G
  hgvsp: ENSP00000375956.3:p.Ser1187Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3559A>G
  hgvsp: ENSP00000404595.2:p.Ser1187Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3508A>G
  hgvsp: ENSP00000375960.1:p.Ser1170Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.640A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2149A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3559A>G
  hgvsp: ENSP00000341118.4:p.Ser1187Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3580A>G
  hgvsp: ENSP00000252692.5:p.Ser1194Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3559A>G
  hgvsp: ENSP00000355771.2:p.Ser1187Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3511A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3556A>G
  hgvsp: ENSP00000383623.3:p.Ser1186Gly
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20810
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 22601
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4555
  bin: 9.75e1
  variant carriers: 295
hgvs: p.Ser1187Gly
num of homozygotes: 4
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

6-168348572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348572
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348572
    reference: chr 6
allele count: 4
allele frequency: 3.29663084327817e-5
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.653C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3593C>T
  hgvsp: ENSP00000252692.5:p.Ser1198Phe
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3521C>T
  hgvsp: ENSP00000375960.1:p.Ser1174Phe
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3572C>T
  hgvsp: ENSP00000355771.2:p.Ser1191Phe
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3524C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3569C>T
  hgvsp: ENSP00000383623.3:p.Ser1190Phe
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3572C>T
  hgvsp: ENSP00000404595.2:p.Ser1191Phe
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2162C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3572C>T
  hgvsp: ENSP00000375956.3:p.Ser1191Phe
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3572C>T
  hgvsp: ENSP00000341118.4:p.Ser1191Phe
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20831
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser1191Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

6-168348580-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348580
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348580
    reference: chr 6
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3580A>G
  hgvsp: ENSP00000375956.3:p.Thr1194Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3577A>G
  hgvsp: ENSP00000383623.3:p.Thr1193Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3601A>G
  hgvsp: ENSP00000252692.5:p.Thr1201Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3580A>G
  hgvsp: ENSP00000341118.4:p.Thr1194Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3580A>G
  hgvsp: ENSP00000355771.2:p.Thr1194Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3529A>G
  hgvsp: ENSP00000375960.1:p.Thr1177Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3580A>G
  hgvsp: ENSP00000404595.2:p.Thr1194Ala
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2170A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3532A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.661A>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr1194Ala
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

6-168348583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348583
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348583
    reference: chr 6
allele count: 8
allele frequency: 6.592718342590609e-5
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3583G>A
  hgvsp: ENSP00000404595.2:p.Ala1195Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.664G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3604G>A
  hgvsp: ENSP00000252692.5:p.Ala1202Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3583G>A
  hgvsp: ENSP00000355771.2:p.Ala1195Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2173G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3583G>A
  hgvsp: ENSP00000341118.4:p.Ala1195Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3535G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3580G>A
  hgvsp: ENSP00000383623.3:p.Ala1194Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3583G>A
  hgvsp: ENSP00000375956.3:p.Ala1195Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3532G>A
  hgvsp: ENSP00000375960.1:p.Ala1178Thr
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20787
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37397
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala1195Thr
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

6-168348584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348584
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348584
    reference: chr 6
allele count: 3
allele frequency: 2.472269378471478e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3584C>T
  hgvsp: ENSP00000341118.4:p.Ala1195Val
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3605C>T
  hgvsp: ENSP00000252692.5:p.Ala1202Val
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3536C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3533C>T
  hgvsp: ENSP00000375960.1:p.Ala1178Val
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3581C>T
  hgvsp: ENSP00000383623.3:p.Ala1194Val
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3584C>T
  hgvsp: ENSP00000404595.2:p.Ala1195Val
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000507679
  gene symbol: MLLT4
  hgvsc: ENST00000507679.1:n.665C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2174C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3584C>T
  hgvsp: ENSP00000355771.2:p.Ala1195Val
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3584C>T
  hgvsp: ENSP00000375956.3:p.Ala1195Val
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8967
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala1195Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

6-168348594-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348594
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348594
    reference: chr 6
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3594A>G
  hgvsp: ENST00000392108.3:c.3594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3546A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3615A>G
  hgvsp: ENST00000351017.4:c.3615A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3594A>G
  hgvsp: ENST00000447894.2:c.3594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2184A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3594A>G
  hgvsp: ENST00000366806.2:c.3594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3543A>G
  hgvsp: ENST00000392112.1:c.3543A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3591A>G
  hgvsp: ENST00000400822.3:c.3591A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3594A>G
  hgvsp: ENST00000344191.4:c.3594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr1198Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

6-168348606-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348606
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348606
    reference: chr 6
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3606T>G
  hgvsp: ENST00000344191.4:c.3606T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3606T>G
  hgvsp: ENST00000366806.2:c.3606T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3603T>G
  hgvsp: ENST00000400822.3:c.3603T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3558T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3606T>G
  hgvsp: ENST00000447894.2:c.3606T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3555T>G
  hgvsp: ENST00000392112.1:c.3555T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3606T>G
  hgvsp: ENST00000392108.3:c.3606T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2196T>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3627T>G
  hgvsp: ENST00000351017.4:c.3627T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1202Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

6-168348636-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348636
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348636
    reference: chr 6
allele count: 2
allele frequency: 1.656177542232527e-5
allele num: 120760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3573+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2214+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3624+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3621+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3624+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3624+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3576+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3645+12T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3624+12T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

6-168348649-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348649
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348649
    reference: chr 6
allele count: 1
allele frequency: 8.319882856049386e-6
allele num: 120194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3645+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3624+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3624+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3624+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2214+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3573+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3576+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3624+25G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3621+25G>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

6-168348654-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348654
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348654
    reference: chr 6
allele count: 2
allele frequency: 1.665750503889527e-5
allele num: 120066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3645+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3624+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3624+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3624+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2214+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3624+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3576+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3573+30T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3621+30T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8384
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28552
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

6-168348658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348658
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348658
    reference: chr 6
allele count: 1
allele frequency: 8.340283569641367e-6
allele num: 119900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2214+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3624+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3573+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3576+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3621+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3624+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3624+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3624+34G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3645+34G>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2902
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

6-168348671-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348671
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348671
    reference: chr 6
allele count: 1
allele frequency: 8.424883736604435e-6
allele num: 118696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3573+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3624+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3576+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3645+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2214+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3621+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3624+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3624+47T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3624+47T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5301
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5315
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

6-168348676-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348676
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348676
    reference: chr 6
allele count: 1
allele frequency: 8.473858147614609e-6
allele num: 118010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3624+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2214+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3624+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3576+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3645+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3624+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3621+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3573+52T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3624+52T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5607
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

6-168348925-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348925
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348925
    reference: chr 6
allele count: 4
allele frequency: 3.527772388125518e-5
allele num: 113386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.217C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-48C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-48C>T
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11407
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

6-168348927-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348927
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348927
    reference: chr 6
allele count: 114
allele frequency: 1.004405286343612e-3
allele num: 113500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.219G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-46G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-46G>A
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11501
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 1.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17974
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 1.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

6-168348929-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348929
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348929
    reference: chr 6
allele count: 1
allele frequency: 8.795848359574281e-6
allele num: 113690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-44A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.221A>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-44A>T
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4519
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

6-168348934-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348934
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348934
    reference: chr 6
allele count: 1
allele frequency: 8.770391159445711e-6
allele num: 114020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.226T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-39T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-39T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12275
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-168348938-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348938
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348938
    reference: chr 6
allele count: 1
allele frequency: 8.752275591653831e-6
allele num: 114256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.230A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-35A>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-35A>G
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

6-168348942-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348942
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348942
    reference: chr 6
allele count: 1
allele frequency: 8.719916288803627e-6
allele num: 114680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.234G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-31G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-31G>C
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2873
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

6-168348942-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348942
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348942
    reference: chr 6
allele count: 1
allele frequency: 8.719916288803627e-6
allele num: 114680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.234G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-31G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-31G>T
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

6-168348944-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348944
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348944
    reference: chr 6
allele count: 1
allele frequency: 8.685682520932494e-6
allele num: 115132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-29T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.236T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-29T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

6-168348947-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348947
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348946
    reference: chr 6
allele count: 4
allele frequency: 3.480924533556112e-5
allele num: 114912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.246delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-19delT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-19delT
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14398
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27684
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6336
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: CT
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

6-168348952-TTTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348952
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348949
    reference: chr 6
allele count: 1
allele frequency: 8.559884955146204e-6
allele num: 116824
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-18_3625-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-18_3577-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-18_2215-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-18_3625-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-18_3625-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-18_3646-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-18_3622-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.247_249delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-18_3574-16delGTT
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-18_3625-16delGTT
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: TTTG
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-168348953-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348953
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348953
    reference: chr 6
allele count: 1
allele frequency: 8.546570261354118e-6
allele num: 117006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.245T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-20T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-20T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14914
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

6-168348968-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348968
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348968
    reference: chr 6
allele count: 2
allele frequency: 1.667111229661243e-5
allele num: 119968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.260T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-5T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-5T>C
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36077
  bin: 6.25e1
  variant carriers: 0
hgvs: c.3625-5T>C
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-168348972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348972
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348972
    reference: chr 6
allele count: 1
allele frequency: 8.301648707433296e-6
allele num: 120458
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3625-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3577-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3646-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3625-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.264G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3625-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3574-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3625-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2215-1G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3622-1G>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2738
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3396
  bin: 7.75e1
  variant carriers: 0
hgvs: c.3625-1G>A
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

6-168348980-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348980
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348980
    reference: chr 6
allele count: 3
allele frequency: 2.48208760114507e-5
allele num: 120866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3632C>T
  hgvsp: ENSP00000341118.4:p.Thr1211Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3653C>T
  hgvsp: ENSP00000252692.5:p.Thr1218Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3629C>T
  hgvsp: ENSP00000383623.3:p.Thr1210Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3584C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2222C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3632C>T
  hgvsp: ENSP00000355771.2:p.Thr1211Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.272C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3632C>T
  hgvsp: ENSP00000375956.3:p.Thr1211Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3632C>T
  hgvsp: ENSP00000404595.2:p.Thr1211Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3581C>T
  hgvsp: ENSP00000375960.1:p.Thr1194Met
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1211Met
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

6-168348981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348981
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348981
    reference: chr 6
allele count: 852
allele frequency: 7.043068529387452e-3
allele num: 120970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3585G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3654G>A
  hgvsp: ENST00000351017.4:c.3654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3633G>A
  hgvsp: ENST00000447894.2:c.3633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3633G>A
  hgvsp: ENST00000344191.4:c.3633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3633G>A
  hgvsp: ENST00000392108.3:c.3633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.273G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2223G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3630G>A
  hgvsp: ENST00000400822.3:c.3630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3582G>A
  hgvsp: ENST00000392112.1:c.3582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3633G>A
  hgvsp: ENST00000366806.2:c.3633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 30668
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16196
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 3.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr1211Thr
num of homozygotes: 32
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

6-168348986-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348986
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348986
    reference: chr 6
allele count: 2
allele frequency: 1.651773178507128e-5
allele num: 121082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3659C>T
  hgvsp: ENSP00000252692.5:p.Pro1220Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3638C>T
  hgvsp: ENSP00000375956.3:p.Pro1213Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3635C>T
  hgvsp: ENSP00000383623.3:p.Pro1212Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3587C>T
  hgvsp: ENSP00000375960.1:p.Pro1196Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3638C>T
  hgvsp: ENSP00000404595.2:p.Pro1213Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3638C>T
  hgvsp: ENSP00000355771.2:p.Pro1213Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2228C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3590C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.278C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3638C>T
  hgvsp: ENSP00000341118.4:p.Pro1213Leu
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4957
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Pro1213Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

6-168348987-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348987
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348987
    reference: chr 6
allele count: 18
allele frequency: 1.485908633129159e-4
allele num: 121138
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3639G>A
  hgvsp: ENST00000392108.3:c.3639G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3639G>A
  hgvsp: ENST00000344191.4:c.3639G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3636G>A
  hgvsp: ENST00000400822.3:c.3636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3591G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3639G>A
  hgvsp: ENST00000366806.2:c.3639G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2229G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3639G>A
  hgvsp: ENST00000447894.2:c.3639G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3660G>A
  hgvsp: ENST00000351017.4:c.3660G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3588G>A
  hgvsp: ENST00000392112.1:c.3588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.279G>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16631
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro1213Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

6-168348989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348989
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348989
    reference: chr 6
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3662C>T
  hgvsp: ENSP00000252692.5:p.Pro1221Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3641C>T
  hgvsp: ENSP00000355771.2:p.Pro1214Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2231C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3590C>T
  hgvsp: ENSP00000375960.1:p.Pro1197Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3641C>T
  hgvsp: ENSP00000404595.2:p.Pro1214Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.281C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3641C>T
  hgvsp: ENSP00000375956.3:p.Pro1214Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3638C>T
  hgvsp: ENSP00000383623.3:p.Pro1213Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3641C>T
  hgvsp: ENSP00000341118.4:p.Pro1214Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3593C>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro1214Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

6-168348996-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168348996
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168348996
    reference: chr 6
allele count: 3
allele frequency: 2.473573984597879e-5
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3645T>C
  hgvsp: ENST00000400822.3:c.3645T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3648T>C
  hgvsp: ENST00000344191.4:c.3648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3648T>C
  hgvsp: ENST00000447894.2:c.3648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3597T>C
  hgvsp: ENST00000392112.1:c.3597T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3669T>C
  hgvsp: ENST00000351017.4:c.3669T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.288T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3648T>C
  hgvsp: ENST00000392108.3:c.3648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3600T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2238T>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3648T>C
  hgvsp: ENST00000366806.2:c.3648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30593
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro1216Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

6-168349010-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349010
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349010
    reference: chr 6
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3662T>A
  hgvsp: ENSP00000355771.2:p.Ile1221Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3662T>A
  hgvsp: ENSP00000404595.2:p.Ile1221Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3611T>A
  hgvsp: ENSP00000375960.1:p.Ile1204Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3662T>A
  hgvsp: ENSP00000341118.4:p.Ile1221Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3614T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3659T>A
  hgvsp: ENSP00000383623.3:p.Ile1220Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3683T>A
  hgvsp: ENSP00000252692.5:p.Ile1228Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3662T>A
  hgvsp: ENSP00000375956.3:p.Ile1221Asn
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.302T>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2252T>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile1221Asn
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

6-168349011-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349011
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349011
    reference: chr 6
allele count: 30283
allele frequency: 2.495591119608392e-1
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3663C>T
  hgvsp: ENST00000447894.2:c.3663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3612C>T
  hgvsp: ENST00000392112.1:c.3612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.303C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3660C>T
  hgvsp: ENST00000400822.3:c.3660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3663C>T
  hgvsp: ENST00000392108.3:c.3663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3684C>T
  hgvsp: ENST00000351017.4:c.3684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3663C>T
  hgvsp: ENST00000366806.2:c.3663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3663C>T
  hgvsp: ENST00000344191.4:c.3663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3615C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2253C>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 1672
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 3.75e1
  variant carriers: 802
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.75e1
  variant carriers: 1905
genotype depth: GenotypeDepth
  all individuals: 17559
  bin: 2.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 6.75e1
  variant carriers: 2261
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 9.75e1
  variant carriers: 5166
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 8.75e1
  variant carriers: 1464
genotype depth: GenotypeDepth
  all individuals: 11304
  bin: 2.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 5.75e1
  variant carriers: 2142
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 8.25e1
  variant carriers: 1632
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.25e1
  variant carriers: 1946
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 3.25e1
  variant carriers: 405
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 1197
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.25e1
  variant carriers: 1224
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 6.25e1
  variant carriers: 2280
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 7.25e1
  variant carriers: 2076
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 6
hgvs: p.Ile1221Ile
num of homozygotes: 3865
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-168349014-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349014
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349014
    reference: chr 6
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2256C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3687C>T
  hgvsp: ENST00000351017.4:c.3687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3666C>T
  hgvsp: ENST00000366806.2:c.3666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3663C>T
  hgvsp: ENST00000400822.3:c.3663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3615C>T
  hgvsp: ENST00000392112.1:c.3615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3666C>T
  hgvsp: ENST00000344191.4:c.3666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3666C>T
  hgvsp: ENST00000392108.3:c.3666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3666C>T
  hgvsp: ENST00000447894.2:c.3666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.306C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3618C>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro1222Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

6-168349020-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349020
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349020
    reference: chr 6
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3624G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.312G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3672G>C
  hgvsp: ENSP00000355771.2:p.Gln1224His
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2262G>C
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3621G>C
  hgvsp: ENSP00000375960.1:p.Gln1207His
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3669G>C
  hgvsp: ENSP00000383623.3:p.Gln1223His
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3672G>C
  hgvsp: ENSP00000404595.2:p.Gln1224His
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3672G>C
  hgvsp: ENSP00000341118.4:p.Gln1224His
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3693G>C
  hgvsp: ENSP00000252692.5:p.Gln1231His
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3672G>C
  hgvsp: ENSP00000375956.3:p.Gln1224His
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln1224His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

6-168349022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349022
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349022
    reference: chr 6
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3626C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3674C>T
  hgvsp: ENSP00000341118.4:p.Thr1225Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3674C>T
  hgvsp: ENSP00000375956.3:p.Thr1225Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.314C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2264C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3671C>T
  hgvsp: ENSP00000383623.3:p.Thr1224Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3674C>T
  hgvsp: ENSP00000404595.2:p.Thr1225Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3623C>T
  hgvsp: ENSP00000375960.1:p.Thr1208Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3674C>T
  hgvsp: ENSP00000355771.2:p.Thr1225Met
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3695C>T
  hgvsp: ENSP00000252692.5:p.Thr1232Met
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr1225Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

6-168349023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349023
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349023
    reference: chr 6
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2265G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3675G>A
  hgvsp: ENST00000447894.2:c.3675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3627G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3675G>A
  hgvsp: ENST00000366806.2:c.3675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3696G>A
  hgvsp: ENST00000351017.4:c.3696G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3672G>A
  hgvsp: ENST00000400822.3:c.3672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3624G>A
  hgvsp: ENST00000392112.1:c.3624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.315G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3675G>A
  hgvsp: ENST00000344191.4:c.3675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3675G>A
  hgvsp: ENST00000392108.3:c.3675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr1225Thr
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

6-168349023-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349023
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349023
    reference: chr 6
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3696G>T
  hgvsp: ENST00000351017.4:c.3696G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3675G>T
  hgvsp: ENST00000344191.4:c.3675G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2265G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3627G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3672G>T
  hgvsp: ENST00000400822.3:c.3672G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3675G>T
  hgvsp: ENST00000366806.2:c.3675G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.315G>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3675G>T
  hgvsp: ENST00000392108.3:c.3675G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3675G>T
  hgvsp: ENST00000447894.2:c.3675G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3624G>T
  hgvsp: ENST00000392112.1:c.3624G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr1225Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-168349044-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349044
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349044
    reference: chr 6
allele count: 7
allele frequency: 5.766252594813668e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3696C>A
  hgvsp: ENST00000447894.2:c.3696C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3696C>A
  hgvsp: ENST00000344191.4:c.3696C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3645C>A
  hgvsp: ENST00000392112.1:c.3645C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3696C>A
  hgvsp: ENST00000366806.2:c.3696C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3717C>A
  hgvsp: ENST00000351017.4:c.3717C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3648C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3693C>A
  hgvsp: ENST00000400822.3:c.3693C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2286C>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3696C>A
  hgvsp: ENST00000392108.3:c.3696C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.336C>A
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr1232Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-168349049-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349049
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349049
    reference: chr 6
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3650C>T
  hgvsp: ENSP00000375960.1:p.Pro1217Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3701C>T
  hgvsp: ENSP00000375956.3:p.Pro1234Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3722C>T
  hgvsp: ENSP00000252692.5:p.Pro1241Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3701C>T
  hgvsp: ENSP00000355771.2:p.Pro1234Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3701C>T
  hgvsp: ENSP00000404595.2:p.Pro1234Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3698C>T
  hgvsp: ENSP00000383623.3:p.Pro1233Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3701C>T
  hgvsp: ENSP00000341118.4:p.Pro1234Leu
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3653C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.341C>T
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2291C>T
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro1234Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

6-168349051-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349051
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349051
    reference: chr 6
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3703G>A
  hgvsp: ENSP00000404595.2:p.Ala1235Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3724G>A
  hgvsp: ENSP00000252692.5:p.Ala1242Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3700G>A
  hgvsp: ENSP00000383623.3:p.Ala1234Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.343G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3652G>A
  hgvsp: ENSP00000375960.1:p.Ala1218Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3703G>A
  hgvsp: ENSP00000341118.4:p.Ala1235Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3655G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3703G>A
  hgvsp: ENSP00000375956.3:p.Ala1235Thr
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2293G>A
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3703G>A
  hgvsp: ENSP00000355771.2:p.Ala1235Thr
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43061
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala1235Thr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

6-168349052-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 168349052
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 168349052
    reference: chr 6
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375956
  ensembl transcript: ENST00000392108
  gene symbol: MLLT4
  hgvsc: ENST00000392108.3:c.3704C>G
  hgvsp: ENSP00000375956.3:p.Ala1235Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000404595
  ensembl transcript: ENST00000447894
  gene symbol: MLLT4
  hgvsc: ENST00000447894.2:c.3704C>G
  hgvsp: ENSP00000404595.2:p.Ala1235Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000355771
  ensembl transcript: ENST00000366806
  gene symbol: MLLT4
  hgvsc: ENST00000366806.2:c.3704C>G
  hgvsp: ENSP00000355771.2:p.Ala1235Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000252692
  ensembl transcript: ENST00000351017
  gene symbol: MLLT4
  hgvsc: ENST00000351017.4:c.3725C>G
  hgvsp: ENSP00000252692.5:p.Ala1242Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000509296
  gene symbol: MLLT4
  hgvsc: ENST00000509296.1:n.344C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000511637
  gene symbol: MLLT4
  hgvsc: ENST00000511637.1:n.2294C>G
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000383623
  ensembl transcript: ENST00000400822
  gene symbol: MLLT4
  hgvsc: ENST00000400822.3:c.3701C>G
  hgvsp: ENSP00000383623.3:p.Ala1234Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000375960
  ensembl transcript: ENST00000392112
  gene symbol: MLLT4
  hgvsc: ENST00000392112.1:c.3653C>G
  hgvsp: ENSP00000375960.1:p.Ala1218Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130396
  ensembl protein: ENSP00000341118
  ensembl transcript: ENST00000344191
  gene symbol: MLLT4
  hgvsc: ENST00000344191.4:c.3704C>G
  hgvsp: ENSP00000341118.4:p.Ala1235Gly
  variant of: http://identifiers.org/hgnc/7137
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130396
  ensembl transcript: ENST00000366809
  gene symbol: MLLT4
  hgvsc: ENST00000366809.2:n.3656C>G
  variant of: http://identifiers.org/hgnc/7137
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala1235Gly
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5073
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7281
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1680
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26814
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.321e0

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

DP
type: SiteQuality
SIO_000300: 1.693026e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.04e-1

QD
type: SiteQuality
SIO_000300: 1.561e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.621e0

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.432e0

GenotypeQuality
all individuals: 26287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8156
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5089
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3663
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7288
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2066
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.04e-1

FS
type: SiteQuality
SIO_000300: 6.156e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

QD
type: SiteQuality
SIO_000300: 1.47e1

DP
type: SiteQuality
SIO_000300: 1.692239e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.477e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.38e0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16096
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5882
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 4.083855159270351e-4
allele num: 7346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.97e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.072204e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

QD
type: SiteQuality
SIO_000300: 1.876e1

GenotypeQuality
all individuals: 2306
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5882
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16096
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.095975232198143e-4
allele num: 3230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46580
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.072204e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.97e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.87e0

QD
type: SiteQuality
SIO_000300: 1.876e1

GenotypeQuality
all individuals: 13404
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5888
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 1.079055e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.01e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 1108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14674
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3716
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3679
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5558
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 180
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.143622722400857e-5
allele num: 46650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4792
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.045e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.56e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.789e1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.149202e6

VQSLOD
type: SiteQuality
SIO_000300: -1.379e0

GenotypeQuality
all individuals: 186
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2047
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13806
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 2.478314745972739e-3
allele num: 4842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4696
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

DP
type: SiteQuality
SIO_000300: 1.207137e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.398999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.68e-2

QD
type: SiteQuality
SIO_000300: 1.285e1

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

GenotypeQuality
all individuals: 900
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3447
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2101
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 12679
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 13

GenotypeQuality
all individuals: 4824
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 12

GenotypeQuality
all individuals: 342
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 241
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1723
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7367
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 470
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 903
bin: 4.75e1
variant carriers: 14

GenotypeQuality
all individuals: 411
bin: 7.75e1
variant carriers: 15

GenotypeQuality
all individuals: 3007
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 301
bin: 8.25e1
variant carriers: 19

South Asian
type: Population
allele count: 130
allele frequency: 1.644736842105263e-2
allele num: 7904
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 133
allele frequency: 2.850407201028718e-2
allele num: 4666
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1763
allele frequency: 3.763716322958029e-2
allele num: 46842
num of homozygotes: 30

African
type: Population
allele count: 51
allele frequency: 1.075949367088608e-2
allele num: 4740
num of homozygotes: 0

Other
type: Population
allele count: 17
allele frequency: 3.02491103202847e-2
allele num: 562
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2478
num of homozygotes: 0

Latino
type: Population
allele count: 88
allele frequency: 1.41615706469263e-2
allele num: 6214
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

QD
type: SiteQuality
SIO_000300: 1.324e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.247763e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4824
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10711
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12679
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4740
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 8.071025020177562e-4
allele num: 2478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.269672516118014e-5
allele num: 46842
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.247763e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

QD
type: SiteQuality
SIO_000300: 1.324e1

GenotypeQuality
all individuals: 1325
bin: 2.75e1
variant carriers: 639

GenotypeQuality
all individuals: 2862
bin: 6.25e1
variant carriers: 1691

GenotypeQuality
all individuals: 1075
bin: 1.25e1
variant carriers: 402

GenotypeQuality
all individuals: 1039
bin: 7.5e0
variant carriers: 340

GenotypeQuality
all individuals: 1858
bin: 2.25e1
variant carriers: 587

GenotypeQuality
all individuals: 1447
bin: 5.25e1
variant carriers: 1215

GenotypeQuality
all individuals: 1744
bin: 4.75e1
variant carriers: 1411

GenotypeQuality
all individuals: 1473
bin: 4.25e1
variant carriers: 1135

GenotypeQuality
all individuals: 4894
bin: 2.5e0
variant carriers: 279

GenotypeQuality
all individuals: 1045
bin: 9.25e1
variant carriers: 996

GenotypeQuality
all individuals: 1582
bin: 7.25e1
variant carriers: 1483

GenotypeQuality
all individuals: 1185
bin: 8.25e1
variant carriers: 1118

GenotypeQuality
all individuals: 29173
bin: 9.75e1
variant carriers: 28900

GenotypeQuality
all individuals: 1532
bin: 7.75e1
variant carriers: 1441

GenotypeQuality
all individuals: 1331
bin: 8.75e1
variant carriers: 1291

GenotypeQuality
all individuals: 1484
bin: 6.75e1
variant carriers: 1279

European (Finnish)
type: Population
allele count: 3313
allele frequency: 5.671003081136597e-1
allele num: 5842
num of homozygotes: 827

African
type: Population
allele count: 6419
allele frequency: 6.812778603268945e-1
allele num: 9422
num of homozygotes: 2022

Other
type: Population
allele count: 469
allele frequency: 5.966921119592875e-1
allele num: 786
num of homozygotes: 132

South Asian
type: Population
allele count: 10409
allele frequency: 7.053123729502643e-1
allele num: 14758
num of homozygotes: 3392

East Asian
type: Population
allele count: 6623
allele frequency: 8.112444879960804e-1
allele num: 8164
num of homozygotes: 2604

Latino
type: Population
allele count: 7046
allele frequency: 6.843434343434344e-1
allele num: 10296
num of homozygotes: 2201

European (Non-Finnish)
type: Population
allele count: 28714
allele frequency: 5.336976320582878e-1
allele num: 53802
num of homozygotes: 5879

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

MQ
type: SiteQuality
SIO_000300: 6.039e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.681e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

DP
type: SiteQuality
SIO_000300: 1.625462e6

GenotypeQuality
all individuals: 1045
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 997
bin: 1.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1733
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1185
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1417
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1331
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 29173
bin: 9.75e1
variant carriers: 184

GenotypeQuality
all individuals: 1075
bin: 1.25e1
variant carriers: 22

GenotypeQuality
all individuals: 4894
bin: 2.5e0
variant carriers: 16

GenotypeQuality
all individuals: 1473
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2862
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1039
bin: 7.5e0
variant carriers: 19

GenotypeQuality
all individuals: 1532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1447
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1484
bin: 6.75e1
variant carriers: 2

African
type: Population
allele count: 173
allele frequency: 1.836128210571004e-2
allele num: 9422
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.272264631043257e-3
allele num: 786
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.016397885892397e-3
allele num: 14758
num of homozygotes: 0

East Asian
type: Population
allele count: 22
allele frequency: 2.694757471827536e-3
allele num: 8164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 7.8064012490242e-4
allele num: 53802
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.456876456876457e-3
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.039e1

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

DP
type: SiteQuality
SIO_000300: 1.625462e6

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.681e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

GenotypeQuality
all individuals: 1325
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1858
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29173
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1484
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1473
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.273614943748673e-3
allele num: 9422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14758
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.625462e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.681e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 6.039e1

GenotypeQuality
all individuals: 1494
bin: 3.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1325
bin: 2.75e1
variant carriers: 19

GenotypeQuality
all individuals: 4894
bin: 2.5e0
variant carriers: 18

GenotypeQuality
all individuals: 1858
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1484
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 29173
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1447
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1473
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1045
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1744
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 997
bin: 1.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1331
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1733
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2862
bin: 6.25e1
variant carriers: 2

Latino
type: Population
allele count: 8
allele frequency: 7.77000777000777e-4
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.423485107839781e-4
allele num: 5842
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.184037359371683e-4
allele num: 9422
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.272264631043257e-3
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.224889759921607e-4
allele num: 8164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 54
allele frequency: 1.003680160588826e-3
allele num: 53802
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.151917604011384e-3
allele num: 14758
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

DP
type: SiteQuality
SIO_000300: 1.625462e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.681e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 6.039e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeQuality
all individuals: 1060
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2633
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17667
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1895
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.595252528475258e-5
allele num: 62686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15368
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.636727e6

MQRankSum
type: SiteQuality
SIO_000300: -5.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.582e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.187e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQ
type: SiteQuality
SIO_000300: 6.057e1

QD
type: SiteQuality
SIO_000300: 1.872e1

GenotypeQuality
all individuals: 925
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8284
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.966955153422502e-4
allele num: 10168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.513e-1

QD
type: SiteQuality
SIO_000300: 1.848e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

DP
type: SiteQuality
SIO_000300: 1.649433e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

MQ
type: SiteQuality
SIO_000300: 6.031e1

GenotypeQuality
all individuals: 2261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.83477576711251e-5
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.513e-1

MQ
type: SiteQuality
SIO_000300: 6.031e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

DP
type: SiteQuality
SIO_000300: 1.649433e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 1.848e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-1

GenotypeQuality
all individuals: 1185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 3

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.5e0
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
all individuals: 892
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 701
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.205013651030033e-5
allele num: 16116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178689297501179e-4
allele num: 8484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.802816901408451e-5
allele num: 11360
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.944773175542406e-4
allele num: 10140
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

QD
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

MQ
type: SiteQuality
SIO_000300: 6.103e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 1.675788e6

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.125044531528322e-4
allele num: 11228
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 1.996805111821086e-3
allele num: 10016
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.8e-1

DP
type: SiteQuality
SIO_000300: 1.705519e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

MQ
type: SiteQuality
SIO_000300: 6.063e1

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

GenotypeQuality
all individuals: 1486
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 690
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variant carriers: 0

GenotypeQuality
all individuals: 1024
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variant carriers: 0

GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
all individuals: 895
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variant carriers: 0

GenotypeQuality
all individuals: 1218
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variant carriers: 0

GenotypeQuality
all individuals: 1501
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GenotypeQuality
all individuals: 2994
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2721
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1570
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GenotypeQuality
all individuals: 1082
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GenotypeQuality
all individuals: 1918
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variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.097413659594239e-5
allele num: 64570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15856
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.906305664410402e-5
allele num: 11228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

FS
type: SiteQuality
SIO_000300: 9.8e-1

MQ
type: SiteQuality
SIO_000300: 6.063e1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 1.705519e6

GenotypeQuality
all individuals: 229
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2721
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7600
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1570
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GenotypeQuality
all individuals: 1218
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1024
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variant carriers: 3

GenotypeQuality
all individuals: 690
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 235
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variant carriers: 9

GenotypeQuality
all individuals: 260
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 825
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variant carriers: 3

GenotypeQuality
all individuals: 1918
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variant carriers: 2

GenotypeQuality
all individuals: 895
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variant carriers: 3

GenotypeQuality
all individuals: 1082
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 4925
bin: 9.75e1
variant carriers: 442

GenotypeQuality
all individuals: 1749
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variant carriers: 0

GenotypeQuality
all individuals: 27310
bin: 6.25e1
variant carriers: 5

South Asian
type: Population
allele count: 11
allele frequency: 6.937436932391524e-4
allele num: 15856
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.440366972477064e-3
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 130
allele frequency: 1.54467680608365e-2
allele num: 8416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.646120489391358e-5
allele num: 64570
num of homozygotes: 0

African
type: Population
allele count: 318
allele frequency: 3.174920127795527e-2
allele num: 10016
num of homozygotes: 2

Latino
type: Population
allele count: 18
allele frequency: 1.603135019593872e-3
allele num: 11228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.81e-1

FS
type: SiteQuality
SIO_000300: 9.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

DP
type: SiteQuality
SIO_000300: 1.705519e6

MQ
type: SiteQuality
SIO_000300: 6.063e1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.706853038245001e-5
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.471e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.991e1

FS
type: SiteQuality
SIO_000300: 3.178e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

QD
type: SiteQuality
SIO_000300: 6.41e0

DP
type: SiteQuality
SIO_000300: 1.73056e6

GenotypeQuality
all individuals: 464
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2906
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 35989
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.695559433779329e-5
allele num: 10314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.242e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.406e0

DP
type: SiteQuality
SIO_000300: 1.735734e6

FS
type: SiteQuality
SIO_000300: 1.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQ
type: SiteQuality
SIO_000300: 5.838e1

QD
type: SiteQuality
SIO_000300: 1.753e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
all individuals: 36349
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 395
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GenotypeQuality
all individuals: 8874
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GenotypeQuality
all individuals: 2913
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 1076
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GenotypeQuality
all individuals: 191
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variant carriers: 0

GenotypeQuality
all individuals: 219
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 822
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GenotypeQuality
all individuals: 1948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4350
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.55e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.03e0

DP
type: SiteQuality
SIO_000300: 1.738853e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.765e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.718e0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8940
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4348
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.334e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

QD
type: SiteQuality
SIO_000300: 2.509e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.708e0

DP
type: SiteQuality
SIO_000300: 1.749066e6

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4347
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
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GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 1952
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.749969e6

FS
type: SiteQuality
SIO_000300: 1.276e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

QD
type: SiteQuality
SIO_000300: 1.31e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.72e-1

GenotypeQuality
all individuals: 1948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3161
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 8951
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
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variant carriers: 0

GenotypeQuality
all individuals: 37231
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.500750075007501e-5
allele num: 66660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.138e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.750851e6

QD
type: SiteQuality
SIO_000300: 1.112e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

FS
type: SiteQuality
SIO_000300: 4.167e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 808
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1924
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variant carriers: 0

GenotypeQuality
all individuals: 1062
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variant carriers: 0

GenotypeQuality
all individuals: 3128
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variant carriers: 0

GenotypeQuality
all individuals: 8921
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.815980629539952e-3
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 268
allele frequency: 2.579899884482095e-2
allele num: 10388
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.199724063465403e-4
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.19e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e-1

FS
type: SiteQuality
SIO_000300: 5.74e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

DP
type: SiteQuality
SIO_000300: 1.765498e6

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2928
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 46
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
all individuals: 1938
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1067
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.997541008186643e-5
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

QD
type: SiteQuality
SIO_000300: 9.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.478e0

FS
type: SiteQuality
SIO_000300: 2.588e0

DP
type: SiteQuality
SIO_000300: 1.75309e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.44e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1934
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.214e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

DP
type: SiteQuality
SIO_000300: 1.753217e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

QD
type: SiteQuality
SIO_000300: 1.384e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1068
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GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.732063858434314e-4
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.125e0

FS
type: SiteQuality
SIO_000300: 1.753e0

DP
type: SiteQuality
SIO_000300: 1.75347e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1932
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variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.593360995850622e-4
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
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MQ
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MQRankSum
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ClippingRankSum
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SIO_000300: -8.1e-2

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.753332e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

QD
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InbreedingCoeff
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MQRankSum
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FS
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DP
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.925e0

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 1.0e-4

DP
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FS
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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SIO_000300: 5.74e-1

MQRankSum
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SIO_000300: 1.36e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
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Latino
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allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

South Asian
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allele frequency: 6.1020258725897e-5
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.784e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.76e0

MQRankSum
type: SiteQuality
SIO_000300: -7.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

DP
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.712509712509713e-5
allele num: 10296
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

DP
type: SiteQuality
SIO_000300: 1.676186e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66052
num of homozygotes: 0

Latino
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allele num: 11476
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Other
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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Latino
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Other
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East Asian
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DP
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InbreedingCoeff
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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FS
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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South Asian
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Other
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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VQSLOD
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 64876
num of homozygotes: 0

South Asian
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Other
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BaseQRankSum
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MQ
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63450
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.010713563776026e-4
allele num: 9894
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.753753753753754e-4
allele num: 7992
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Other
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

FS
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
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SIO_000300: -3.532e0

InbreedingCoeff
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SIO_000300: 9.0e-4

MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 109

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575299306868305e-5
allele num: 63480
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.783166904422254e-4
allele num: 11216
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.347417840375587e-3
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8004
num of homozygotes: 0

South Asian
type: Population
allele count: 109
allele frequency: 8.059745637385389e-3
allele num: 13524
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.743e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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QD
type: SiteQuality
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DP
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SIO_000300: 1.394662e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63582
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.903133903133904e-5
allele num: 11232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
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MQRankSum
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FS
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.407098e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.882572392965002e-5
allele num: 11258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63752
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.831e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.43805e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.001201441730076e-4
allele num: 9988
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8062
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.668e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
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allele num: 64114
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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QD
type: SiteQuality
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MQRankSum
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DP
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559721745640578e-5
allele num: 64114
num of homozygotes: 0

Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 64284
num of homozygotes: 0

Latino
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African
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European (Finnish)
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South Asian
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Other
type: Population
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQ
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 211
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 221
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4571
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30623
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.229105211406096e-4
allele num: 8136
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.213966238638003e-5
allele num: 13862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.115555970963018e-5
allele num: 64194
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.539768e6

VQSLOD
type: SiteQuality
SIO_000300: -1.003e0

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

FS
type: SiteQuality
SIO_000300: 9.821e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.419e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.11e0

GenotypeQuality
all individuals: 746
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6804
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4683
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2563
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537657225451303e-5
allele num: 65034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: -6.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 4.74e0

MQ
type: SiteQuality
SIO_000300: 5.826e1

DP
type: SiteQuality
SIO_000300: 1.556976e6

QD
type: SiteQuality
SIO_000300: 1.833e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.305e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.339e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

GenotypeQuality
all individuals: 253
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4687
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33362
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.884207627702051e-5
allele num: 14526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.560587e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.422e0

QD
type: SiteQuality
SIO_000300: 2.046e1

FS
type: SiteQuality
SIO_000300: 5.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e0

MQRankSum
type: SiteQuality
SIO_000300: -6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.638e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4730
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019141356198297e-5
allele num: 66244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

DP
type: SiteQuality
SIO_000300: 1.611861e6

FS
type: SiteQuality
SIO_000300: 1.671e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.589e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.71e-1

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4738
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505615947484116e-5
allele num: 66418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 1.620312e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.411e1

FS
type: SiteQuality
SIO_000300: 7.281e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.92e-1

GenotypeQuality
all individuals: 287
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7339
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4761
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1093
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3450
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502855425308085e-5
allele num: 66540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.926040061633282e-4
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.293e1

FS
type: SiteQuality
SIO_000300: 1.508e0

DP
type: SiteQuality
SIO_000300: 1.629531e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2746
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
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variant carriers: 1

GenotypeQuality
all individuals: 2298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 9.75e1
variant carriers: 817

GenotypeQuality
all individuals: 1358
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 842
allele frequency: 7.283737024221454e-2
allele num: 11560
num of homozygotes: 32

Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.852822192255828e-4
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.131207847946045e-5
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004175804368072e-5
allele num: 66574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.04e0

FS
type: SiteQuality
SIO_000300: 6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

QD
type: SiteQuality
SIO_000300: 1.349e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.68e-1

DP
type: SiteQuality
SIO_000300: 1.665897e6

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7379
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.308e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.644602e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.539942252165544e-3
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
SIO_000300: 1.64605e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 1.252e1

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 4987
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.647194e6

VQSLOD
type: SiteQuality
SIO_000300: -2.755e0

QD
type: SiteQuality
SIO_000300: 2.745e1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.81e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.699e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.885725278953444e-4
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 4.626e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 1.649584e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 2820
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 1406
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.651731e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.442e1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 3815
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 1123
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 378
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
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variant carriers: 26230

GenotypeQuality
all individuals: 1145
bin: 7.75e1
variant carriers: 26

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 1872
allele frequency: 2.834645669291339e-1
allele num: 6604
num of homozygotes: 274

Latino
type: Population
allele count: 3271
allele frequency: 2.826650535776011e-1
allele num: 11572
num of homozygotes: 451

African
type: Population
allele count: 1421
allele frequency: 1.366608963262166e-1
allele num: 10398
num of homozygotes: 91

East Asian
type: Population
allele count: 2891
allele frequency: 3.341423948220065e-1
allele num: 8652
num of homozygotes: 479

Other
type: Population
allele count: 265
allele frequency: 2.918502202643172e-1
allele num: 908
num of homozygotes: 48

South Asian
type: Population
allele count: 4663
allele frequency: 2.825375666505089e-1
allele num: 16504
num of homozygotes: 651

European (Non-Finnish)
type: Population
allele count: 15900
allele frequency: 2.38352221622594e-1
allele num: 66708
num of homozygotes: 1871

DP
type: SiteQuality
SIO_000300: 2.894927e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e0

QD
type: SiteQuality
SIO_000300: 1.462e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.690808e6

VQSLOD
type: SiteQuality
SIO_000300: -7.737000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.23e-1

BaseQRankSum
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SIO_000300: -1.956e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.851e1

FS
type: SiteQuality
SIO_000300: 3.049e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 42983
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

FS
type: SiteQuality
SIO_000300: 1.568e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.048e0

DP
type: SiteQuality
SIO_000300: 1.690625e6

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: -1.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

QD
type: SiteQuality
SIO_000300: 1.179e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 660
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GenotypeQuality
all individuals: 3045
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variant carriers: 3

GenotypeQuality
all individuals: 504
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GenotypeQuality
all individuals: 7
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 1.690734e6

ReadPosRankSum
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SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
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SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.104e0

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
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allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.175e1

InbreedingCoeff
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SIO_000300: 1.0e-4

ClippingRankSum
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SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 5.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

MQRankSum
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SIO_000300: 1.0e-2

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

DP
type: SiteQuality
SIO_000300: 1.690683e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.175e1

DP
type: SiteQuality
SIO_000300: 1.690683e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.743e0

VQSLOD
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SIO_000300: 3.62e0

BaseQRankSum
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SIO_000300: -2.185e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
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SIO_000300: 1.212e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495863805299125e-5
allele num: 66728
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
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FS
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MQ
type: SiteQuality
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VQSLOD
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QD
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ClippingRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 66728
num of homozygotes: 0

European (Finnish)
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VQSLOD
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MQ
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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