10-45473455-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473455
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473455
    reference: chr 10
allele count: 5
allele frequency: 4.288973905882757e-5
allele num: 116578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4514G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+611C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4514G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4514G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4514G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4410G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2885G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.24C>T
  hgvsp: ENST00000298295.3:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.24C>T
  hgvsp: ENST00000448778.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4514G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4514G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4518G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18051
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser8Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

10-45473467-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473467
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473467
    reference: chr 10
allele count: 1
allele frequency: 8.604963342856159e-6
allele num: 116212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2873C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4502C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.12G>C
  hgvsp: ENST00000298295.3:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+599G>C
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4502C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4502C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.12G>C
  hgvsp: ENST00000448778.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4502C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4398C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4506C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4502C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4502C>G
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg4Arg
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

10-45473468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473468
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473468
    reference: chr 10
allele count: 4
allele frequency: 3.442340791738382e-5
allele num: 116200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4501C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4501C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4505C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4501C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+598G>A
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.11G>A
  hgvsp: ENSP00000298295.3:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2872C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.11G>A
  hgvsp: ENSP00000414494.1:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4501C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4397C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4501C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4501C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2284
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg4Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

10-45473469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473469
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473469
    reference: chr 10
allele count: 5
allele frequency: 4.304333603071573e-5
allele num: 116162
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.10C>T
  hgvsp: ENSP00000298295.3:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4500G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4500G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4500G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4504G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4396G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2871G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+597C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.10C>T
  hgvsp: ENSP00000414494.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4500G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4500G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4500G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14039
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg4Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-45473481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473481
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473481
    reference: chr 10
allele count: 1
allele frequency: 8.648424257100357e-6
allele num: 115628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4488C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-3G>A
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4488C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2859C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4488C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4384C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4488C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4492C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4488C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4488C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+585G>A
  variant of: http://identifiers.org/hgnc/23355
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

10-45473487-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473487
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473487
    reference: chr 10
allele count: 5
allele frequency: 4.3351598806964e-5
allele num: 115336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4482C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+579G>A
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4482C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4482C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4482C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-9G>A
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4378C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2853C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4482C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4482C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4486C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8085
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-45473488-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473488
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473488
    reference: chr 10
allele count: 3
allele frequency: 2.603443487920022e-5
allele num: 115232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2852G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4481G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4481G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4481G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-10C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4481G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4485G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4377G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-10C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4481G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+578C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4481G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

10-45473490-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473490
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473490
    reference: chr 10
allele count: 1
allele frequency: 8.67874748316323e-6
allele num: 115224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4479G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2850G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4483G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4479G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4479G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4479G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-12C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4479G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4479G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+576C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4375G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

10-45473492-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473492
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473492
    reference: chr 10
allele count: 1
allele frequency: 8.685984295740394e-6
allele num: 115128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4373G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+574C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2848G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4477G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4477G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4481G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-14C>T
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4477G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4477G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4477G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4477G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/10-45473501-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473501
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473501
    reference: chr 10
allele count: 2
allele frequency: 1.743800788197956e-5
allele num: 114692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-23T>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-23T>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4468A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4468A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4364A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4468A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4468A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4468A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4472A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+565T>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4468A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2839A>C
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13790
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7810
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-23T>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

10-45473506-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473506
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473505
    reference: chr 10
allele count: 1
allele frequency: 8.738508860847985e-6
allele num: 114436
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4357delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-25-4delA
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-29delA
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+559delA
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4461delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4461delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4461delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4461delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4465delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4461delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4461delT
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2832delT
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-25-4delA
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: GT
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/10-45473514-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473514
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473514
    reference: chr 10
allele count: 9
allele frequency: 7.892382973499132e-5
allele num: 114034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4455A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4455A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4459A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-36T>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4455A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4455A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4455A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4351A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2826A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4455A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+552T>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-25-11T>G
  variant of: http://identifiers.org/hgnc/23355
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15530
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

10-45473517-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473517
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473517
    reference: chr 10
allele count: 1
allele frequency: 8.801422309845271e-6
allele num: 113618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4348G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4452G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4456G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-39C>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4452G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+549C>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-25-14C>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4452G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4452G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4452G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2823G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4452G>C
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-45473529-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45473529
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45473529
    reference: chr 10
allele count: 1
allele frequency: 8.9394264463992e-6
allele num: 111864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-4336T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000414494
  ensembl transcript: ENST00000448778
  gene symbol: C10orf10
  hgvsc: ENST00000448778.1:c.-51A>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-4440T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-4440T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-2811T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl protein: ENSP00000298295
  ensembl transcript: ENST00000298295
  gene symbol: C10orf10
  hgvsc: ENST00000298295.3:c.-25-26A>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-4444T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-4440T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-4440T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-4440T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165507
  ensembl transcript: ENST00000496638
  gene symbol: C10orf10
  hgvsc: ENST00000496638.1:n.173+537A>G
  variant of: http://identifiers.org/hgnc/23355
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-4440T>C
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-45476295-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45476295
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45476295
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 14
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-1570T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-1674T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-1674T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-1674T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-1674T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-1674T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-1674T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-1678T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.139-45T>G
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/10-45476371-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45476371
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45476371
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 8
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-1494C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-1602C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-1598C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-1598C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-1598C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-1598C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-1598C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*20C>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-1598C>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

10-45477819-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477819
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477819
    reference: chr 10
allele count: 3
allele frequency: 1.100755852351948e-4
allele num: 27254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-46C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1333C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-150C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-154C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7656
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

10-45477820-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477820
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477820
    reference: chr 10
allele count: 2
allele frequency: 7.416196974191635e-5
allele num: 26968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-45G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-153G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-149G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-149G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1334G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-149G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-149G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-149G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-149G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-149G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24836
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

10-45477821-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477821
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477821
    reference: chr 10
allele count: 5
allele frequency: 1.851166234727879e-4
allele num: 27010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-152T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1335T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-148T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-44T>C
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24923
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6737
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

10-45477829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477829
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477829
    reference: chr 10
allele count: 951
allele frequency: 3.370667044729567e-2
allele num: 28214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1343G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-140G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-140G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-36G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-140G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-140G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-144G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-140G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-140G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-140G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18379
  bin: 2.5e0
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 2.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 27003
  bin: 7.5e0
  variant carriers: 708
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 1.25e1
  variant carriers: 418
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 2.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 6.75e1
  variant carriers: 51
num of homozygotes: 17
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

10-45477832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477832
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477832
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 28542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1346G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-137G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-141G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-33G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27909
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

10-45477836-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477836
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477836
    reference: chr 10
allele count: 1
allele frequency: 3.402286336418073e-5
allele num: 29392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1350C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-137C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-133C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-29C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15896
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29218
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

10-45477837-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477837
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477837
    reference: chr 10
allele count: 4
allele frequency: 1.350621285791464e-4
allele num: 29616
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-28T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-132T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-132T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1351T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-132T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-132T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-132T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-136T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-132T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-132T>C
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29637
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4294
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

10-45477850-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477850
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477850
    reference: chr 10
allele count: 1
allele frequency: 2.955257402919794e-5
allele num: 33838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1364G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-15G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-119G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-123G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5511
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8634
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

10-45477857-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477857
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477857
    reference: chr 10
allele count: 1
allele frequency: 2.579446966570367e-5
allele num: 38768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1371C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-112C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-112C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-112C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-116C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-112C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-8C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-112C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-112C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-112C>G
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 1.25e1
  variant carriers: 0
hgvs: c.63-8C>G
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

10-45477858-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477858
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477858
    reference: chr 10
allele count: 1
allele frequency: 2.547640884540915e-5
allele num: 39252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1372T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.63-7T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-111T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-115T>G
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34482
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5813
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 3.75e1
  variant carriers: 0
hgvs: c.63-7T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

10-45477868-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477868
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477868
    reference: chr 10
allele count: 5
allele frequency: 1.019867009341982e-4
allele num: 49026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-101G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-101G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-101G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.66G>A
  hgvsp: ENST00000334940.6:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-101G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-101G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1382G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-105G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-101G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-101G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9280
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32709
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 10637
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg22Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

10-45477874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477874
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477874
    reference: chr 10
allele count: 1
allele frequency: 1.781578478531979e-5
allele num: 56130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-95G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1388G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-95G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.72G>A
  hgvsp: ENST00000334940.6:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-95G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-95G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-95G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-95G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-99G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-95G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val24Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

10-45477875-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477875
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477875
    reference: chr 10
allele count: 58
allele frequency: 1.004259445233231e-3
allele num: 57754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-94C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1389C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-94C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-94C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-98C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-94C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-94C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.73C>T
  hgvsp: ENSP00000334543.6:p.Gln25Ter
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-94C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-94C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13500
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29487
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln25Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

10-45477888-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477888
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477888
    reference: chr 10
allele count: 2
allele frequency: 2.574466441829931e-5
allele num: 77686
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1402T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+2T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-81T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-85T>C
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23350
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 7.75e1
  variant carriers: 0
hgvs: c.84+2T>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

10-45477890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477890
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477890
    reference: chr 10
allele count: 2
allele frequency: 2.503755633450175e-5
allele num: 79880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-83C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-79C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+4C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-79C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1404C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-79C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-79C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-79C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-79C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-79C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24495
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
hgvs: c.84+4C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

10-45477895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477895
    reference: chr 10
allele count: 3071
allele frequency: 3.475633219402884e-2
allele num: 88358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-74C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-74C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-74C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-74C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-74C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1409C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-78C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-74C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-74C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.25e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 27142
  bin: 2.25e1
  variant carriers: 709
genotype depth: GenotypeDepth
  all individuals: 4990
  bin: 1.25e1
  variant carriers: 338
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15636
  bin: 7.5e0
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 3.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 1.75e1
  variant carriers: 714
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 2.75e1
  variant carriers: 539
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 54
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

10-45477896-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477896
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477896
    reference: chr 10
allele count: 1
allele frequency: 1.102754681193622e-5
allele num: 90682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-73A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1410A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-73A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+10A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-73A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-73A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-73A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-77A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-73A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-73A>G
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

10-45477904-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477904
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477904
    reference: chr 10
allele count: 2
allele frequency: 2.011020391746772e-5
allele num: 99452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+18C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-65C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-65C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-65C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-65C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1418C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-69C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-65C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-65C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-65C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

10-45477911-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477911
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477911
    reference: chr 10
allele count: 1
allele frequency: 9.422051369024064e-6
allele num: 106134
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-58G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-58G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+25G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-58G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-58G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-58G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-58G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1425G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-62G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-58G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

10-45477914-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477914
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477914
    reference: chr 10
allele count: 5
allele frequency: 4.598800632794967e-5
allele num: 108724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-55A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-55A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-55A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-55A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-59A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-55A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+28A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-55A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1428A>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-55A>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

10-45477926-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477926
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477926
    reference: chr 10
allele count: 1
allele frequency: 8.753194916144393e-6
allele num: 114244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-43G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-43G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1440G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-43G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-43G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-43G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.84+40G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-47G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-43G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-43G>C
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39573
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

10-45477935-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477935
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477935
    reference: chr 10
allele count: 15
allele frequency: 1.290988897495481e-4
allele num: 116190
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-38T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1449T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-34T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.85-34T>G
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40159
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10736
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

10-45477938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477938
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477938
    reference: chr 10
allele count: 2
allele frequency: 1.714413070685251e-5
allele num: 116658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.85-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1452G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-35G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-31G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-31G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

10-45477945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477945
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477945
    reference: chr 10
allele count: 6
allele frequency: 5.103169067991222e-5
allele num: 117574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.85-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-28G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1459G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-24G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-24G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11593
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40028
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

10-45477947-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477947
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477947
    reference: chr 10
allele count: 1
allele frequency: 8.4888202237653e-6
allele num: 117802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1461G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.85-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-22G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-26G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-22G>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

10-45477953-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477953
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477953
    reference: chr 10
allele count: 1
allele frequency: 8.451370812345762e-6
allele num: 118324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-20G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.85-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-16G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1467G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

10-45477960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477960
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477960
    reference: chr 10
allele count: 1
allele frequency: 8.426019548365353e-6
allele num: 118680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2145-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*25-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.139-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.118-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1474C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.173-13C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.139-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.85-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.56-9C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.139-9C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44972
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

10-45477974-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477974
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477974
    reference: chr 10
allele count: 1
allele frequency: 8.390528771123156e-6
allele num: 119182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.123A>G
  hgvsp: ENST00000428466.1:c.123A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.90A>G
  hgvsp: ENST00000334940.6:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.144A>G
  hgvsp: ENST00000340258.5:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.144A>G
  hgvsp: ENST00000427758.1:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.174A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*30A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1488A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2150A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.61A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.144A>G
  hgvsp: ENST00000374417.2:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
hgvs: n.174A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

10-45477982-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477982
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477982
    reference: chr 10
allele count: 1
allele frequency: 8.380262805041566e-6
allele num: 119328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.152T>C
  hgvsp: ENSP00000409767.1:p.Leu51Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*38T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2158T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1496T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.182T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.69T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.152T>C
  hgvsp: ENSP00000363538.2:p.Leu51Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.131T>C
  hgvsp: ENSP00000413468.1:p.Leu44Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.98T>C
  hgvsp: ENSP00000334543.6:p.Leu33Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.152T>C
  hgvsp: ENSP00000339692.4:p.Leu51Pro
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu51Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

10-45477988-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477988
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477988
    reference: chr 10
allele count: 3
allele frequency: 2.512941649494899e-5
allele num: 119382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.137T>C
  hgvsp: ENSP00000413468.1:p.Ile46Thr
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*44T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.104T>C
  hgvsp: ENSP00000334543.6:p.Ile35Thr
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.188T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.158T>C
  hgvsp: ENSP00000339692.4:p.Ile53Thr
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.158T>C
  hgvsp: ENSP00000363538.2:p.Ile53Thr
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1502T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2164T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.75T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.158T>C
  hgvsp: ENSP00000409767.1:p.Ile53Thr
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile53Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

10-45477989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477989
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477989
    reference: chr 10
allele count: 1
allele frequency: 8.376612497905846e-6
allele num: 119380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.138C>T
  hgvsp: ENST00000428466.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.189C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.159C>T
  hgvsp: ENST00000340258.5:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.105C>T
  hgvsp: ENST00000334940.6:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.76C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.159C>T
  hgvsp: ENST00000374417.2:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1503C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*45C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.159C>T
  hgvsp: ENST00000427758.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2165C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile53Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-45477990-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477990
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477990
    reference: chr 10
allele count: 2
allele frequency: 1.674901599531028e-5
allele num: 119410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.160G>A
  hgvsp: ENSP00000363538.2:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.160G>A
  hgvsp: ENSP00000339692.4:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2166G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.106G>A
  hgvsp: ENSP00000334543.6:p.Glu36Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.139G>A
  hgvsp: ENSP00000413468.1:p.Glu47Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*46G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1504G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.190G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.77G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.160G>A
  hgvsp: ENSP00000409767.1:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu54Lys
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

10-45477995-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477995
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477995
    reference: chr 10
allele count: 2
allele frequency: 1.673080140538732e-5
allele num: 119540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2171G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*51G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.165G>A
  hgvsp: ENST00000340258.5:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.144G>A
  hgvsp: ENST00000428466.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.82G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.165G>A
  hgvsp: ENST00000374417.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.195G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.165G>A
  hgvsp: ENST00000427758.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1509G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.111G>A
  hgvsp: ENST00000334940.6:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly55Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

10-45477997-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45477997
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45477997
    reference: chr 10
allele count: 1
allele frequency: 8.361623492817366e-6
allele num: 119594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.167T>C
  hgvsp: ENSP00000363538.2:p.Leu56Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.113T>C
  hgvsp: ENSP00000334543.6:p.Leu38Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.146T>C
  hgvsp: ENSP00000413468.1:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.167T>C
  hgvsp: ENSP00000339692.4:p.Leu56Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*53T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.167T>C
  hgvsp: ENSP00000409767.1:p.Leu56Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2173T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.197T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1511T>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.84T>C
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu56Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

10-45478002-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478002
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478002
    reference: chr 10
allele count: 1
allele frequency: 8.357989402069439e-6
allele num: 119646
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.172A>G
  hgvsp: ENSP00000339692.4:p.Asn58Asp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2178A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.172A>G
  hgvsp: ENSP00000409767.1:p.Asn58Asp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.172A>G
  hgvsp: ENSP00000363538.2:p.Asn58Asp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.151A>G
  hgvsp: ENSP00000413468.1:p.Asn51Asp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.118A>G
  hgvsp: ENSP00000334543.6:p.Asn40Asp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*58A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.202A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.89A>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1516A>G
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn58Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

10-45478008-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478008
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478008
    reference: chr 10
allele count: 1
allele frequency: 8.357989402069439e-6
allele num: 119646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.178G>C
  hgvsp: ENSP00000363538.2:p.Ala60Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*64G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2184G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1522G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.124G>C
  hgvsp: ENSP00000334543.6:p.Ala42Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.178G>C
  hgvsp: ENSP00000409767.1:p.Ala60Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.157G>C
  hgvsp: ENSP00000413468.1:p.Ala53Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.95G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.178G>C
  hgvsp: ENSP00000339692.4:p.Ala60Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.208G>C
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5741
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala60Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

10-45478014-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478014
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478014
    reference: chr 10
allele count: 1
allele frequency: 8.357849692431131e-6
allele num: 119648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*70G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.130G>T
  hgvsp: ENSP00000334543.6:p.Gly44Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.184G>T
  hgvsp: ENSP00000409767.1:p.Gly62Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.184G>T
  hgvsp: ENSP00000339692.4:p.Gly62Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2190G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.101G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.163G>T
  hgvsp: ENSP00000413468.1:p.Gly55Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.184G>T
  hgvsp: ENSP00000363538.2:p.Gly62Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.214G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1528G>T
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly62Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

10-45478015-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478015
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478015
    reference: chr 10
allele count: 9
allele frequency: 7.520807567603704e-5
allele num: 119668
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.185G>A
  hgvsp: ENSP00000339692.4:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.185G>A
  hgvsp: ENSP00000409767.1:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.215G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.102G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*71G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.185G>A
  hgvsp: ENSP00000363538.2:p.Gly62Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.131G>A
  hgvsp: ENSP00000334543.6:p.Gly44Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2191G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.164G>A
  hgvsp: ENSP00000413468.1:p.Gly55Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1529G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37163
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly62Glu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-45478024-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478024
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478024
    reference: chr 10
allele count: 1
allele frequency: 8.351707088928977e-6
allele num: 119736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1538G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2200G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*80G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.111G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.194G>A
  hgvsp: ENSP00000363538.2:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.140G>A
  hgvsp: ENSP00000334543.6:p.Arg47Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.194G>A
  hgvsp: ENSP00000339692.4:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.194G>A
  hgvsp: ENSP00000409767.1:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.173G>A
  hgvsp: ENSP00000413468.1:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.224G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36751
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg65Gln
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-45478024-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478024
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478024
    reference: chr 10
allele count: 1
allele frequency: 8.351707088928977e-6
allele num: 119736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.194G>C
  hgvsp: ENSP00000409767.1:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.224G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*80G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2200G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1538G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.194G>C
  hgvsp: ENSP00000363538.2:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.173G>C
  hgvsp: ENSP00000413468.1:p.Arg58Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.111G>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.194G>C
  hgvsp: ENSP00000339692.4:p.Arg65Pro
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.140G>C
  hgvsp: ENSP00000334543.6:p.Arg47Pro
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg65Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

10-45478031-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478031
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478031
    reference: chr 10
allele count: 2
allele frequency: 1.669142561466175e-5
allele num: 119822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.147C>T
  hgvsp: ENST00000334940.6:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.118C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*87C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.201C>T
  hgvsp: ENST00000427758.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.231C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.201C>T
  hgvsp: ENST00000374417.2:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.180C>T
  hgvsp: ENST00000428466.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.201C>T
  hgvsp: ENST00000340258.5:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2207C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1545C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile67Ile
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-45478032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478032
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478032
    reference: chr 10
allele count: 1
allele frequency: 8.347942232239753e-6
allele num: 119790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.202C>T
  hgvsp: ENSP00000363538.2:p.Arg68Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.181C>T
  hgvsp: ENSP00000413468.1:p.Arg61Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2208C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.202C>T
  hgvsp: ENSP00000409767.1:p.Arg68Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*88C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.232C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.202C>T
  hgvsp: ENSP00000339692.4:p.Arg68Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.119C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1546C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.148C>T
  hgvsp: ENSP00000334543.6:p.Arg50Trp
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg68Trp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

10-45478033-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478033
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478033
    reference: chr 10
allele count: 20
allele frequency: 1.668641225450116e-4
allele num: 119858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.149G>A
  hgvsp: ENSP00000334543.6:p.Arg50Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.203G>A
  hgvsp: ENSP00000409767.1:p.Arg68Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.120G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.233G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.203G>A
  hgvsp: ENSP00000339692.4:p.Arg68Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.203G>A
  hgvsp: ENSP00000363538.2:p.Arg68Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*89G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.182G>A
  hgvsp: ENSP00000413468.1:p.Arg61Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1547G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2209G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36644
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14847
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg68Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

10-45478042-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478042
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478042
    reference: chr 10
allele count: 51
allele frequency: 4.251275382614784e-4
allele num: 119964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.212T>G
  hgvsp: ENSP00000363538.2:p.Met71Arg
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.212T>G
  hgvsp: ENSP00000409767.1:p.Met71Arg
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.158T>G
  hgvsp: ENSP00000334543.6:p.Met53Arg
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1556T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.242T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.191T>G
  hgvsp: ENSP00000413468.1:p.Met64Arg
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.212T>G
  hgvsp: ENSP00000339692.4:p.Met71Arg
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.129T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*98T>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2218T>G
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15064
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 36670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Met71Arg
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

10-45478043-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478043
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478043
    reference: chr 10
allele count: 10
allele frequency: 8.336390009670212e-5
allele num: 119956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.192G>A
  hgvsp: ENSP00000413468.1:p.Met64Ile
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.213G>A
  hgvsp: ENSP00000339692.4:p.Met71Ile
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.159G>A
  hgvsp: ENSP00000334543.6:p.Met53Ile
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.213G>A
  hgvsp: ENSP00000409767.1:p.Met71Ile
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*99G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2219G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.243G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1557G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.130G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.213G>A
  hgvsp: ENSP00000363538.2:p.Met71Ile
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36666
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15073
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met71Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

10-45478044-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478044
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478044
    reference: chr 10
allele count: 34
allele frequency: 2.834089090424113e-4
allele num: 119968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.214C>G
  hgvsp: ENSP00000363538.2:p.Gln72Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1558C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*100C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.160C>G
  hgvsp: ENSP00000334543.6:p.Gln54Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.193C>G
  hgvsp: ENSP00000413468.1:p.Gln65Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.214C>G
  hgvsp: ENSP00000409767.1:p.Gln72Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2220C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.214C>G
  hgvsp: ENSP00000339692.4:p.Gln72Glu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.244C>G
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.131C>G
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36601
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15068
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln72Glu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

10-45478053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478053
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478053
    reference: chr 10
allele count: 16
allele frequency: 1.334267320457654e-4
allele num: 119916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2229C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.223C>T
  hgvsp: ENSP00000339692.4:p.Arg75Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.202C>T
  hgvsp: ENSP00000413468.1:p.Arg68Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.253C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*109C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.223C>T
  hgvsp: ENSP00000363538.2:p.Arg75Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.223C>T
  hgvsp: ENSP00000409767.1:p.Arg75Trp
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.140C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1567C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.169C>T
  hgvsp: ENSP00000334543.6:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15131
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36463
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg75Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

10-45478054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478054
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478054
    reference: chr 10
allele count: 3
allele frequency: 2.501959868563708e-5
allele num: 119906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.170G>A
  hgvsp: ENSP00000334543.6:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1568G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.254G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.224G>A
  hgvsp: ENSP00000339692.4:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*110G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.203G>A
  hgvsp: ENSP00000413468.1:p.Arg68Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.224G>A
  hgvsp: ENSP00000363538.2:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2230G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.141G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.224G>A
  hgvsp: ENSP00000409767.1:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg75Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

10-45478054-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478054
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478054
    reference: chr 10
allele count: 22
allele frequency: 1.834770570280053e-4
allele num: 119906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*110G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.254G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.141G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.170G>T
  hgvsp: ENSP00000334543.6:p.Arg57Leu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.203G>T
  hgvsp: ENSP00000413468.1:p.Arg68Leu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.224G>T
  hgvsp: ENSP00000409767.1:p.Arg75Leu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1568G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.224G>T
  hgvsp: ENSP00000363538.2:p.Arg75Leu
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2230G>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.224G>T
  hgvsp: ENSP00000339692.4:p.Arg75Leu
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36427
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg75Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

10-45478056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478056
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478056
    reference: chr 10
allele count: 1
allele frequency: 8.336390009670212e-6
allele num: 119956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1570G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.172G>A
  hgvsp: ENSP00000334543.6:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.226G>A
  hgvsp: ENSP00000363538.2:p.Glu76Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.226G>A
  hgvsp: ENSP00000409767.1:p.Glu76Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2232G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.205G>A
  hgvsp: ENSP00000413468.1:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*112G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.256G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.143G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.226G>A
  hgvsp: ENSP00000339692.4:p.Glu76Lys
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu76Lys
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

10-45478064-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478064
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478064
    reference: chr 10
allele count: 3
allele frequency: 2.50095870083532e-5
allele num: 119954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.234G>A
  hgvsp: ENST00000427758.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.264G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.234G>A
  hgvsp: ENST00000374417.2:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.234G>A
  hgvsp: ENST00000340258.5:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1578G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*120G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2240G>A
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.213G>A
  hgvsp: ENST00000428466.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.180G>A
  hgvsp: ENST00000334940.6:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.151G>A
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val78Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-45478076-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478076
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478076
    reference: chr 10
allele count: 1
allele frequency: 8.34599142032082e-6
allele num: 119818
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.246C>T
  hgvsp: ENST00000340258.5:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1590C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.192C>T
  hgvsp: ENST00000334940.6:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.225C>T
  hgvsp: ENST00000428466.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000363538
  ensembl transcript: ENST00000374417
  gene symbol: RASSF4
  hgvsc: ENST00000374417.2:c.246C>T
  hgvsp: ENST00000374417.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000409767
  ensembl transcript: ENST00000427758
  gene symbol: RASSF4
  hgvsc: ENST00000427758.1:c.246C>T
  hgvsp: ENST00000427758.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.163C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2252C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.276C>T
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*132C>T
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser82Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/10-45478082-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45478082
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 45478082
    reference: chr 10
allele count: 1
allele frequency: 8.352125615969264e-6
allele num: 119730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000462822
  gene symbol: RASSF4
  hgvsc: ENST00000462822.1:n.282A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000472561
  gene symbol: RASSF4
  hgvsc: ENST00000472561.1:n.169A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000473555
  ensembl transcript: ENST00000483709
  gene symbol: RASSF4
  hgvsc: ENST00000483709.2:c.*138A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000339692
  ensembl transcript: ENST00000340258
  gene symbol: RASSF4
  hgvsc: ENST00000340258.5:c.252A>C
  hgvsp: ENST00000340258.5:c.252A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000334543
  ensembl transcript: ENST00000334940
  gene symbol: RASSF4
  hgvsc: ENST00000334940.6:c.198A>C
  hgvsp: ENST00000334940.6:c.198A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000465735
  gene symbol: RASSF4
  hgvsc: ENST00000465735.1:n.1596A>C
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107551
  ensembl protein: ENSP00000413468
  ensembl transcript: ENST00000428466
  gene symbol: RASSF4
  hgvsc: ENST00000428466.1:c.231A>C
  hgvsp: ENST00000428466.1:c.231A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20793
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107551
  ensembl transcript: ENST00000489171
  gene symbol: RASSF4
  hgvsc: ENST00000489171.1:n.2258A>C
  variant of: http://identifiers.org/hgnc/20793
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Ser84Ser
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 50
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2281
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26435
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8355
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6681
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.510414228879008e-4
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575448215017173e-5
allele num: 63474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.859281e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 5.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeDepth
all individuals: 233
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6678
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3537
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26181
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579429510060966e-5
allele num: 63314
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 9.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 1.321e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.853711e6

FS
type: SiteQuality
SIO_000300: 2.632e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

GenotypeDepth
all individuals: 50
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8501
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8330
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26162
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6682
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.223210315695865e-4
allele num: 8996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.158459934935725e-5
allele num: 63322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.927e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.853318e6

QD
type: SiteQuality
SIO_000300: 1.058e1

FS
type: SiteQuality
SIO_000300: 1.452e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

GenotypeDepth
all individuals: 29
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6681
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 8325
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26159
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.898644592587911e-5
allele num: 63302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.251e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

DP
type: SiteQuality
SIO_000300: 1.853072e6

FS
type: SiteQuality
SIO_000300: 2.891e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeDepth
all individuals: 235
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 25721
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6676
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1685
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4625
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.401e1

DP
type: SiteQuality
SIO_000300: 1.844404e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.635e0

GenotypeDepth
all individuals: 34
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

African
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allele frequency: 1.136105430583958e-4
allele num: 8802
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.445286709866732e-4
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62834
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -1.3e-3

BaseQRankSum
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FS
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SIO_000300: 1.234e0

MQ
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ClippingRankSum
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MQRankSum
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SIO_000300: -4.56e-1

VQSLOD
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DP
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ReadPosRankSum
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SIO_000300: 2.28e-1

QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
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allele count: 1
allele frequency: 1.592813226721035e-5
allele num: 62782
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.349624060150376e-4
allele num: 8512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

QD
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FS
type: SiteQuality
SIO_000300: 1.974e0

MQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
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SIO_000300: -2.042e0

InbreedingCoeff
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SIO_000300: -2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.389999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.837526e6

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62774
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 16356
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Other
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MQRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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VQSLOD
type: SiteQuality
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MQ
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.735150244584206e-5
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62704
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.834271e6

ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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SIO_000300: 1.029e1

FS
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SIO_000300: 1.228e0

MQRankSum
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SIO_000300: -1.233e0

VQSLOD
type: SiteQuality
SIO_000300: -1.894e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.203280158882696e-5
allele num: 62436
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 3.38e0

DP
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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SIO_000300: 1.0291e1

InbreedingCoeff
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SIO_000300: -1.5e-3

MQRankSum
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MQ
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SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.404e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62310
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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Other
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ReadPosRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62052
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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East Asian
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African
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.186521120075937e-4
allele num: 8428
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61804
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 4.228e0

BaseQRankSum
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SIO_000300: -4.95e-1

QD
type: SiteQuality
SIO_000300: 2.725e1

MQ
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-1

VQSLOD
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SIO_000300: -3.053e0

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.64533219256968e-5
allele num: 60778
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.291e1

ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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SIO_000300: -1.098e0

BaseQRankSum
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SIO_000300: -2.484e0

VQSLOD
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SIO_000300: 2.61e-1

ReadPosRankSum
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.115e3

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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SIO_000300: 7.31e-1

VQSLOD
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SIO_000300: 7.65e-1

InbreedingCoeff
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SIO_000300: -9.810000000000001e-2

QD
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SIO_000300: 1.604e1

FS
type: SiteQuality
SIO_000300: 4.347e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.984e1

DP
type: SiteQuality
SIO_000300: 6.764e3

QD
type: SiteQuality
SIO_000300: 8.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.093e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 2.379064234734338e-4
allele num: 12610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.308e0

DP
type: SiteQuality
SIO_000300: 5.28242e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.48e-2

FS
type: SiteQuality
SIO_000300: 2.106e0

QD
type: SiteQuality
SIO_000300: 1.078e1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1922
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1850
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1948
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.400384061449832e-4
allele num: 8332
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DP
type: SiteQuality
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ClippingRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 6.63e-1

InbreedingCoeff
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SIO_000300: 3.07e-2

BaseQRankSum
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QD
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ReadPosRankSum
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SIO_000300: 3.22e-1

MQRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 4.008980115458627e-4
allele num: 12472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1930
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.19e0

InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
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QD
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SIO_000300: 1.035e1

DP
type: SiteQuality
SIO_000300: 5.32233e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 40

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 86

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1053

GenotypeQuality
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variant carriers: 9

African
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allele count: 12
allele frequency: 5.994005994005994e-3
allele num: 2002
num of homozygotes: 0

European (Non-Finnish)
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allele count: 668
allele frequency: 5.004495055439017e-2
allele num: 13348
num of homozygotes: 8

Other
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allele count: 10
allele frequency: 3.472222222222222e-2
allele num: 288
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European (Finnish)
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allele count: 52
allele frequency: 2.272727272727273e-2
allele num: 2288
num of homozygotes: 0

Latino
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allele count: 23
allele frequency: 2.436440677966102e-2
allele num: 944
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.03950103950104e-3
allele num: 962
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South Asian
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allele count: 185
allele frequency: 2.20711047482701e-2
allele num: 8382
num of homozygotes: 8

QD
type: SiteQuality
SIO_000300: 1.268e1

ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.278e0

DP
type: SiteQuality
SIO_000300: 5.56467e5

ReadPosRankSum
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SIO_000300: 3.58e-1

MQRankSum
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SIO_000300: 2.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 286
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2272
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13558
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.025e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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MQRankSum
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SIO_000300: -7.31e-1

BaseQRankSum
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SIO_000300: -7.31e-1

FS
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-2

DP
type: SiteQuality
SIO_000300: 5.55592e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1054
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2338
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14036
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 9.310986964618249e-4
allele num: 1074
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.092e1

VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 5.69488e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14144
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.669724770642202e-3
allele num: 1090
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.72e-2

VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.72783e5

BaseQRankSum
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SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.975857535556353e-5
allele num: 16734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2534
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.33373e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 3.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.95e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.574e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.114578689255461e-4
allele num: 8972
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e0

FS
type: SiteQuality
SIO_000300: 2.539e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 6.74396e5

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.98355427090601e-5
allele num: 20066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1920
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1984
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2768
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

QD
type: SiteQuality
SIO_000300: 8.34e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 1.908542636842507e-4
allele num: 26198
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 406
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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QD
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 436
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.268614761064261e-5
allele num: 30594
num of homozygotes: 0

African
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South Asian
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VQSLOD
type: SiteQuality
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QD
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MQ
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BaseQRankSum
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DP
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MQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.167564143173899e-5
allele num: 31570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

African
type: Population
allele count: 48
allele frequency: 1.007133864876206e-2
allele num: 4766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3380
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 2.352326189231574e-3
allele num: 3826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.289e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 7.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.37384e5

QD
type: SiteQuality
SIO_000300: 1.289e1

GenotypeQuality
all individuals: 21515
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 23814
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.613823013749193e-5
allele num: 43348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.84e-1

QD
type: SiteQuality
SIO_000300: 1.452e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

DP
type: SiteQuality
SIO_000300: 9.97312e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 419
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44610
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.09981401115933e-4
allele num: 6452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.16e-1

DP
type: SiteQuality
SIO_000300: 1.018779e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.539e0

QD
type: SiteQuality
SIO_000300: 1.011e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-1

FS
type: SiteQuality
SIO_000300: 2.465e0

VQSLOD
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 917
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1767
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 411
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variant carriers: 21

GenotypeQuality
all individuals: 703
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variant carriers: 10

GenotypeQuality
all individuals: 1909
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variant carriers: 8

GenotypeQuality
all individuals: 3444
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variant carriers: 2895

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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variant carriers: 21

GenotypeQuality
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variant carriers: 14

GenotypeQuality
all individuals: 750
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variant carriers: 17

GenotypeQuality
all individuals: 197
bin: 8.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1268
bin: 3.75e1
variant carriers: 9

European (Non-Finnish)
type: Population
allele count: 1842
allele frequency: 3.725276058730737e-2
allele num: 49446
num of homozygotes: 25

South Asian
type: Population
allele count: 368
allele frequency: 2.982655211541579e-2
allele num: 12338
num of homozygotes: 10

Latino
type: Population
allele count: 64
allele frequency: 8.35727343954035e-3
allele num: 7658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 230
allele frequency: 4.63896732553449e-2
allele num: 4958
num of homozygotes: 8

African
type: Population
allele count: 53
allele frequency: 7.530548451264564e-3
allele num: 7038
num of homozygotes: 1

Other
type: Population
allele count: 20
allele frequency: 3.08641975308642e-2
allele num: 648
num of homozygotes: 0

East Asian
type: Population
allele count: 494
allele frequency: 7.876275510204081e-2
allele num: 6272
num of homozygotes: 10

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.099464e6

VQSLOD
type: SiteQuality
SIO_000300: 5.82e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.264e1

GenotypeQuality
all individuals: 3227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
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variant carriers: 0

GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 1750
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GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 29375
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GenotypeQuality
all individuals: 478
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GenotypeQuality
all individuals: 558
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GenotypeQuality
all individuals: 15469
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GenotypeQuality
all individuals: 857
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GenotypeQuality
all individuals: 1942
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GenotypeQuality
all individuals: 193
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GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 960
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GenotypeQuality
all individuals: 840
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GenotypeQuality
all individuals: 667
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GenotypeQuality
all individuals: 1343
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.384274640088594e-4
allele num: 7224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.11495e6

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

GenotypeQuality
all individuals: 357
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variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 665
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 484
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African
type: Population
allele count: 2
allele frequency: 2.541942043721403e-4
allele num: 7868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7210
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 2.634e1

VQSLOD
type: SiteQuality
SIO_000300: -2.298e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.197215e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 675
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GenotypeQuality
all individuals: 284
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.690274162469152e-5
allele num: 59162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

FS
type: SiteQuality
SIO_000300: 4.476e0

DP
type: SiteQuality
SIO_000300: 1.264422e6

QD
type: SiteQuality
SIO_000300: 4.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.48e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8794
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European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.265555775970377e-5
allele num: 60492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.415e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

QD
type: SiteQuality
SIO_000300: 1.078e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.292316e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 586
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 767
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10950
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.646284726837697e-5
allele num: 15046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.323e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.247e0

DP
type: SiteQuality
SIO_000300: 1.351367e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15386
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.656020818547433e-3
allele num: 8454
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64338
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.039933444259567e-4
allele num: 9616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

QD
type: SiteQuality
SIO_000300: 1.139e1

FS
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.752e0

DP
type: SiteQuality
SIO_000300: 1.374548e6

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64556
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.789869339538214e-4
allele num: 11174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.24e0

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

DP
type: SiteQuality
SIO_000300: 1.382603e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

FS
type: SiteQuality
SIO_000300: 2.417e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.012e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.621214455158816e-5
allele num: 64918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.103662321539416e-4
allele num: 6444
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.397134083930399e-5
allele num: 15632
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.395131e6

VQSLOD
type: SiteQuality
SIO_000300: 8.7e-1

FS
type: SiteQuality
SIO_000300: 5.044e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

QD
type: SiteQuality
SIO_000300: 1.188e1

GenotypeQuality
all individuals: 455
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 444
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GenotypeQuality
all individuals: 527
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.000200040008002e-4
allele num: 9998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.851e0

DP
type: SiteQuality
SIO_000300: 1.398148e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.627e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

FS
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.08e-1

QD
type: SiteQuality
SIO_000300: 7.83e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.341154090044388e-5
allele num: 15770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65244
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.883e1

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.007e0

DP
type: SiteQuality
SIO_000300: 1.406221e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.7353e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.029e0

QD
type: SiteQuality
SIO_000300: 1.279e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.317119393556538e-5
allele num: 15830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.45e-1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

MQ
type: SiteQuality
SIO_000300: 5.887e1

QD
type: SiteQuality
SIO_000300: 9.43e0

DP
type: SiteQuality
SIO_000300: 1.414102e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523879186858066e-5
allele num: 65622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 2.1e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.423289e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44416
bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16048
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.76731544800982e-5
allele num: 11406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65672
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.587e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.877e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

QD
type: SiteQuality
SIO_000300: 9.42e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65684
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.488372093023256e-4
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

MQ
type: SiteQuality
SIO_000300: 5.881e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.427853e6

FS
type: SiteQuality
SIO_000300: 2.468e0

VQSLOD
type: SiteQuality
SIO_000300: -2.915e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522487134983709e-5
allele num: 65682
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.473e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.044881554107545e-5
allele num: 65684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 2.905e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

DP
type: SiteQuality
SIO_000300: 1.430984e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65746
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.948178453146308e-4
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16146
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VQSLOD
type: SiteQuality
SIO_000300: 9.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.043e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.669e1

DP
type: SiteQuality
SIO_000300: 1.431298e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.192e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520218911523259e-5
allele num: 65780
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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FS
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65808
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African
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allele num: 10262
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Other
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South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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FS
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MQ
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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DP
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SIO_000300: 1.43302e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.5194797301404e-5
allele num: 65812
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Other
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East Asian
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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DP
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QD
type: SiteQuality
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FS
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MQ
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1882
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variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

QD
type: SiteQuality
SIO_000300: 1.434e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

FS
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.435612e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeQuality
all individuals: 5714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42655
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.771929824561404e-4
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 1.436012e6

FS
type: SiteQuality
SIO_000300: 5.971e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518879674352198e-5
allele num: 65838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.22e-2

QD
type: SiteQuality
SIO_000300: 1.539e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.443007e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 6.908e0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 383
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variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518879674352198e-5
allele num: 65838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

FS
type: SiteQuality
SIO_000300: 6.908e0

DP
type: SiteQuality
SIO_000300: 1.443007e6

QD
type: SiteQuality
SIO_000300: 1.539e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.22e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 974
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 499
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GenotypeQuality
all individuals: 206
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.035822707953856e-5
allele num: 65880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.143e1

DP
type: SiteQuality
SIO_000300: 1.448674e6

FS
type: SiteQuality
SIO_000300: 1.028e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.447e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.26e-1

GenotypeQuality
all individuals: 975
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 480
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GenotypeQuality
all individuals: 1927
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518095700752976e-5
allele num: 65872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.68e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.45016e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

QD
type: SiteQuality
SIO_000300: 1.503e1

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
all individuals: 413
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 7.849293563579278e-4
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.127450980392157e-5
allele num: 16320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.365456972933608e-4
allele num: 65912
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.248e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

FS
type: SiteQuality
SIO_000300: 3.192e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.450278e6

GenotypeQuality
all individuals: 202
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 409
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1185
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1980
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 314
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variant carriers: 0

GenotypeQuality
all individuals: 421
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GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 9.75e1
variant carriers: 50

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 2.266387726638773e-3
allele num: 11472
num of homozygotes: 1

South Asian
type: Population
allele count: 8
allele frequency: 4.893564962074871e-4
allele num: 16348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-5
allele num: 65980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.362663032898579e-3
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.277904328018223e-3
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.454539e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

QD
type: SiteQuality
SIO_000300: 1.334e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.737098344693282e-4
allele num: 10270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.283e1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.629e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 3.221e0

DP
type: SiteQuality
SIO_000300: 1.454386e6

GenotypeQuality
all individuals: 428
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
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GenotypeQuality
all individuals: 201
bin: 4.25e1
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GenotypeQuality
all individuals: 5853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44213
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 1956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.940229745703634e-4
allele num: 65986
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.446183953033268e-4
allele num: 16352
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.615062761506276e-4
allele num: 11472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.42e0

DP
type: SiteQuality
SIO_000300: 1.455212e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeQuality
all individuals: 44006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 433
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5847
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.234688536032106e-4
allele num: 11462
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.748488984207447e-5
allele num: 10258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.364421939904794e-4
allele num: 65962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 1.068e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

DP
type: SiteQuality
SIO_000300: 1.456525e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
all individuals: 1986
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 447
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65966
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.221150323604836e-4
allele num: 16378
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

DP
type: SiteQuality
SIO_000300: 1.457099e6

FS
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

QD
type: SiteQuality
SIO_000300: 1.174e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e-1

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 455
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variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 410
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65966
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 1.950078003120125e-3
allele num: 10256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

FS
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.174e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
type: SiteQuality
SIO_000300: 1.457099e6

GenotypeQuality
all individuals: 400
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
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variant carriers: 0

GenotypeQuality
all individuals: 437
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variant carriers: 0

GenotypeQuality
all individuals: 189
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variant carriers: 0

GenotypeQuality
all individuals: 44051
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 410
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variant carriers: 0

GenotypeQuality
all individuals: 1993
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 423
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GenotypeQuality
all individuals: 5896
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.771e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 5.176e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.243e0

VQSLOD
type: SiteQuality
SIO_000300: -3.685e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

DP
type: SiteQuality
SIO_000300: 1.457139e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

GenotypeQuality
all individuals: 1202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 361
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variant carriers: 0

GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 299
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GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 414
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GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
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variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 387
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320724065908564e-4
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.1441647597254e-3
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65996
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.368e1

DP
type: SiteQuality
SIO_000300: 1.458741e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

FS
type: SiteQuality
SIO_000300: 8.103e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.368e0

GenotypeQuality
all individuals: 1044
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 2.5e0
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GenotypeQuality
all individuals: 163
bin: 4.25e1
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GenotypeQuality
all individuals: 2075
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GenotypeQuality
all individuals: 328
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5953
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GenotypeQuality
all individuals: 214
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 335
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 176
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GenotypeQuality
all individuals: 44412
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GenotypeQuality
all individuals: 317
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GenotypeQuality
all individuals: 428
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516300227445034e-5
allele num: 65950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.09e-1

FS
type: SiteQuality
SIO_000300: 1.454e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e0

DP
type: SiteQuality
SIO_000300: 1.461764e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -3.719e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1