9-140043559-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140043559
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140043559
    reference: chr 9
allele count: 3
allele frequency: 3.872166864577418e-5
allele num: 77476
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.669C>G
  hgvsp: ENST00000371561.3:c.669C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.669C>G
  hgvsp: ENST00000350902.5:c.669C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.732C>G
  hgvsp: ENST00000371546.4:c.732C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.669C>G
  hgvsp: ENST00000315048.3:c.669C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.732C>G
  hgvsp: ENST00000371553.3:c.732C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1044C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.732C>G
  hgvsp: ENST00000371555.4:c.732C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.732C>G
  hgvsp: ENST00000371560.3:c.732C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.669C>G
  hgvsp: ENST00000371550.4:c.669C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.669C>G
  hgvsp: ENST00000371559.4:c.669C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18719
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.732C>G
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-140043582-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140043582
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140043582
    reference: chr 9
allele count: 1
allele frequency: 1.942879347192539e-5
allele num: 51470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.671+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.734+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.734+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.671+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.734+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1046+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.671+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.671+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.671+21A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.734+21A>G
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3912
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

9-140043585-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140043585
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140043585
    reference: chr 9
allele count: 1
allele frequency: 1.9486340075607e-5
allele num: 51318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.734+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.671+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.734+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.671+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.734+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.671+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.671+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1046+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.671+24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.734+24C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11440
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

9-140051071-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051071
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051071
    reference: chr 9
allele count: 3
allele frequency: 4.781333673339284e-5
allele num: 62744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-50C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-50C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15283
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4907
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

9-140051087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051087
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051087
    reference: chr 9
allele count: 1
allele frequency: 1.591900410710306e-5
allele num: 62818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-34G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-34G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14477
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22899
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

9-140051090-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051090
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051090
    reference: chr 9
allele count: 28
allele frequency: 4.461013924736322e-4
allele num: 62766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-31T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-31T>G
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14424
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 22952
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4895
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

9-140051096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051096
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051096
    reference: chr 9
allele count: 2
allele frequency: 3.194786109069998e-5
allele num: 62602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-25C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-25C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23157
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14010
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4786
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

9-140051097-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051097
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051097
    reference: chr 9
allele count: 1
allele frequency: 1.591495050450393e-5
allele num: 62834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-24C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13857
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3818
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

9-140051098-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051098
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051098
    reference: chr 9
allele count: 2
allele frequency: 3.185220576524925e-5
allele num: 62790
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-23C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-23C>G
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9953
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

9-140051098-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051098
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051098
    reference: chr 9
allele count: 2
allele frequency: 3.185220576524925e-5
allele num: 62790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-23C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-23C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13737
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23281
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8397
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25819
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

9-140051101-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051101
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051101
    reference: chr 9
allele count: 1
allele frequency: 1.582779360557138e-5
allele num: 63180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-20C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-20C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-140051106-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051106
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051106
    reference: chr 9
allele count: 1
allele frequency: 1.58247879478415e-5
allele num: 63192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-15C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-15C>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

9-140051107-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051107
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051107
    reference: chr 9
allele count: 4
allele frequency: 6.332119677061896e-5
allele num: 63170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-14C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-14C>G
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9680
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4454
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

9-140051107-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051107
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051107
    reference: chr 9
allele count: 2
allele frequency: 3.166059838530948e-5
allele num: 63170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-14C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-14C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27330
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

9-140051114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051114
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051114
    reference: chr 9
allele count: 2
allele frequency: 3.166962249809982e-5
allele num: 63152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.735-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.672-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.672-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.672-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.672-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.672-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1047-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.735-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.735-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.735-7C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12838
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
hgvs: c.735-7C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

http://identifiers.org/exac.variant/9-140051142-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051142
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051142
    reference: chr 9
allele count: 69
allele frequency: 1.139140196790596e-3
allele num: 60572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.756A>C
  hgvsp: ENST00000371560.3:c.756A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.693A>C
  hgvsp: ENST00000350902.5:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.756A>C
  hgvsp: ENST00000371546.4:c.756A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.693A>C
  hgvsp: ENST00000371561.3:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.756A>C
  hgvsp: ENST00000371553.3:c.756A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.693A>C
  hgvsp: ENST00000315048.3:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.693A>C
  hgvsp: ENST00000371550.4:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.756A>C
  hgvsp: ENST00000371555.4:c.756A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1068A>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.693A>C
  hgvsp: ENST00000371559.4:c.693A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24808
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 3.25e1
  variant carriers: 1
hgvs: p.Val252Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

9-140051145-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051145
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051145
    reference: chr 9
allele count: 6
allele frequency: 1.02006120367222e-4
allele num: 58820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1071C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.759C>T
  hgvsp: ENST00000371555.4:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.759C>T
  hgvsp: ENST00000371560.3:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.696C>T
  hgvsp: ENST00000371550.4:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.759C>T
  hgvsp: ENST00000371553.3:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.759C>T
  hgvsp: ENST00000371546.4:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.696C>T
  hgvsp: ENST00000315048.3:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.696C>T
  hgvsp: ENST00000350902.5:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.696C>T
  hgvsp: ENST00000371559.4:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.696C>T
  hgvsp: ENST00000371561.3:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24875
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14769
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Tyr253Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

9-140051154-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051154
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051154
    reference: chr 9
allele count: 1
allele frequency: 1.718331156780535e-5
allele num: 58196
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.768C>G
  hgvsp: ENST00000371553.3:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.705C>G
  hgvsp: ENST00000371561.3:c.705C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.768C>G
  hgvsp: ENST00000371546.4:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.768C>G
  hgvsp: ENST00000371560.3:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.705C>G
  hgvsp: ENST00000371550.4:c.705C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1080C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.705C>G
  hgvsp: ENST00000315048.3:c.705C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.705C>G
  hgvsp: ENST00000371559.4:c.705C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.768C>G
  hgvsp: ENST00000371555.4:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.705C>G
  hgvsp: ENST00000350902.5:c.705C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala256Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum

9-140051154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051154
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051154
    reference: chr 9
allele count: 5
allele frequency: 8.591655783902674e-5
allele num: 58196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1080C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.768C>T
  hgvsp: ENST00000371555.4:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.705C>T
  hgvsp: ENST00000371559.4:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.768C>T
  hgvsp: ENST00000371560.3:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.768C>T
  hgvsp: ENST00000371553.3:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.705C>T
  hgvsp: ENST00000350902.5:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.705C>T
  hgvsp: ENST00000371550.4:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.768C>T
  hgvsp: ENST00000371546.4:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.705C>T
  hgvsp: ENST00000371561.3:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.705C>T
  hgvsp: ENST00000315048.3:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala256Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

9-140051155-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051155
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051155
    reference: chr 9
allele count: 1
allele frequency: 1.720696537958566e-5
allele num: 58116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.769G>A
  hgvsp: ENSP00000360610.4:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1081G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.769G>A
  hgvsp: ENSP00000360608.3:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.706G>A
  hgvsp: ENSP00000360605.4:p.Ala236Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.706G>A
  hgvsp: ENSP00000316696.3:p.Ala236Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.706G>A
  hgvsp: ENSP00000360616.3:p.Ala236Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.769G>A
  hgvsp: ENSP00000360601.4:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.769G>A
  hgvsp: ENSP00000360615.3:p.Ala257Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.706G>A
  hgvsp: ENSP00000316915.8:p.Ala236Thr
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.706G>A
  hgvsp: ENSP00000360614.4:p.Ala236Thr
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala257Thr
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

9-140051172-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051172
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051172
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 54596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.723G>A
  hgvsp: ENST00000371561.3:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.723G>A
  hgvsp: ENST00000371559.4:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1098G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.786G>A
  hgvsp: ENST00000371546.4:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.723G>A
  hgvsp: ENST00000315048.3:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.786G>A
  hgvsp: ENST00000371555.4:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.786G>A
  hgvsp: ENST00000371553.3:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.723G>A
  hgvsp: ENST00000371550.4:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.723G>A
  hgvsp: ENST00000350902.5:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.786G>A
  hgvsp: ENST00000371560.3:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr262Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

9-140051174-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051174
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051174
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 54342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.725G>C
  hgvsp: ENSP00000360616.3:p.Gly242Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.725G>C
  hgvsp: ENSP00000316696.3:p.Gly242Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.725G>C
  hgvsp: ENSP00000360605.4:p.Gly242Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.725G>C
  hgvsp: ENSP00000316915.8:p.Gly242Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.725G>C
  hgvsp: ENSP00000360614.4:p.Gly242Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.788G>C
  hgvsp: ENSP00000360610.4:p.Gly263Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.788G>C
  hgvsp: ENSP00000360601.4:p.Gly263Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1100G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.788G>C
  hgvsp: ENSP00000360608.3:p.Gly263Ala
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.788G>C
  hgvsp: ENSP00000360615.3:p.Gly263Ala
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25748
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly263Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-140051189-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051189
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051189
    reference: chr 9
allele count: 1
allele frequency: 1.941370607649e-5
allele num: 51510
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.803G>A
  hgvsp: ENSP00000360608.3:p.Trp268Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.740G>A
  hgvsp: ENSP00000360616.3:p.Trp247Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.803G>A
  hgvsp: ENSP00000360601.4:p.Trp268Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.803G>A
  hgvsp: ENSP00000360615.3:p.Trp268Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1115G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.803G>A
  hgvsp: ENSP00000360610.4:p.Trp268Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.740G>A
  hgvsp: ENSP00000360605.4:p.Trp247Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.740G>A
  hgvsp: ENSP00000316696.3:p.Trp247Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.740G>A
  hgvsp: ENSP00000360614.4:p.Trp247Ter
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.740G>A
  hgvsp: ENSP00000316915.8:p.Trp247Ter
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7857
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13979
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Trp268Ter
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

9-140051194-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051194
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051194
    reference: chr 9
allele count: 1
allele frequency: 1.972075412163761e-5
allele num: 50708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1120G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.808G>C
  hgvsp: ENSP00000360601.4:p.Val270Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.808G>C
  hgvsp: ENSP00000360615.3:p.Val270Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.745G>C
  hgvsp: ENSP00000360614.4:p.Val249Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.745G>C
  hgvsp: ENSP00000316915.8:p.Val249Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.745G>C
  hgvsp: ENSP00000360605.4:p.Val249Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.745G>C
  hgvsp: ENSP00000316696.3:p.Val249Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.808G>C
  hgvsp: ENSP00000360610.4:p.Val270Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.745G>C
  hgvsp: ENSP00000360616.3:p.Val249Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.808G>C
  hgvsp: ENSP00000360608.3:p.Val270Leu
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24420
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val270Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

9-140051195-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051195
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051195
    reference: chr 9
allele count: 1
allele frequency: 2.008758185689607e-5
allele num: 49782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.746T>G
  hgvsp: ENSP00000360605.4:p.Val249Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.809T>G
  hgvsp: ENSP00000360610.4:p.Val270Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1121T>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.809T>G
  hgvsp: ENSP00000360608.3:p.Val270Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.746T>G
  hgvsp: ENSP00000316915.8:p.Val249Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.809T>G
  hgvsp: ENSP00000360615.3:p.Val270Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.746T>G
  hgvsp: ENSP00000360616.3:p.Val249Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.746T>G
  hgvsp: ENSP00000316696.3:p.Val249Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.809T>G
  hgvsp: ENSP00000360601.4:p.Val270Gly
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.746T>G
  hgvsp: ENSP00000360614.4:p.Val249Gly
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val270Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

9-140051217-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051217
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051217
    reference: chr 9
allele count: 113
allele frequency: 2.194771394165404e-3
allele num: 51486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.831G>C
  hgvsp: ENST00000371546.4:c.831G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.768G>C
  hgvsp: ENST00000315048.3:c.768G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.768G>C
  hgvsp: ENST00000371561.3:c.768G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.831G>C
  hgvsp: ENST00000371555.4:c.831G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.831G>C
  hgvsp: ENST00000371560.3:c.831G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.768G>C
  hgvsp: ENST00000371559.4:c.768G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.768G>C
  hgvsp: ENST00000350902.5:c.768G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.831G>C
  hgvsp: ENST00000371553.3:c.831G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.768G>C
  hgvsp: ENST00000371550.4:c.768G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1143G>C
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 1.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13563
  bin: 1.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26661
  bin: 7.5e0
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 9.75e1
  variant carriers: 117
hgvs: p.Gly277Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-140051229-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051229
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051229
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 53074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.843C>A
  hgvsp: ENST00000371546.4:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.780C>A
  hgvsp: ENST00000371550.4:c.780C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.843C>A
  hgvsp: ENST00000371560.3:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.780C>A
  hgvsp: ENST00000371561.3:c.780C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.780C>A
  hgvsp: ENST00000371559.4:c.780C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.780C>A
  hgvsp: ENST00000315048.3:c.780C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.843C>A
  hgvsp: ENST00000371553.3:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.843C>A
  hgvsp: ENST00000371555.4:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1155C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.780C>A
  hgvsp: ENST00000350902.5:c.780C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27135
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg281Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-140051229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051229
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051229
    reference: chr 9
allele count: 12
allele frequency: 2.260994083732148e-4
allele num: 53074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.843C>T
  hgvsp: ENST00000371555.4:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.780C>T
  hgvsp: ENST00000371559.4:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.780C>T
  hgvsp: ENST00000371550.4:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.780C>T
  hgvsp: ENST00000350902.5:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.780C>T
  hgvsp: ENST00000315048.3:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.780C>T
  hgvsp: ENST00000371561.3:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.843C>T
  hgvsp: ENST00000371553.3:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.843C>T
  hgvsp: ENST00000371560.3:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.843C>T
  hgvsp: ENST00000371546.4:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1155C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27135
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3912
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg281Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/9-140051237-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051237
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051237
    reference: chr 9
allele count: 1
allele frequency: 1.809103408350821e-5
allele num: 55276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.788C>A
  hgvsp: ENSP00000316915.8:p.Pro263Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.851C>A
  hgvsp: ENSP00000360615.3:p.Pro284Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.788C>A
  hgvsp: ENSP00000316696.3:p.Pro263Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.788C>A
  hgvsp: ENSP00000360605.4:p.Pro263Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.788C>A
  hgvsp: ENSP00000360614.4:p.Pro263Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1163C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.788C>A
  hgvsp: ENSP00000360616.3:p.Pro263Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.851C>A
  hgvsp: ENSP00000360610.4:p.Pro284Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.851C>A
  hgvsp: ENSP00000360608.3:p.Pro284Gln
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.851C>A
  hgvsp: ENSP00000360601.4:p.Pro284Gln
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27062
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13853
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Pro284Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

9-140051238-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051238
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051238
    reference: chr 9
allele count: 22058
allele frequency: 3.307046476761619e-1
allele num: 66700
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.789A>G
  hgvsp: ENST00000315048.3:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.789A>G
  hgvsp: ENST00000371550.4:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1164A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.789A>G
  hgvsp: ENST00000350902.5:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.852A>G
  hgvsp: ENST00000371553.3:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.789A>G
  hgvsp: ENST00000371559.4:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.789A>G
  hgvsp: ENST00000371561.3:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.852A>G
  hgvsp: ENST00000371560.3:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.852A>G
  hgvsp: ENST00000371555.4:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.852A>G
  hgvsp: ENST00000371546.4:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16047
  bin: 1.25e1
  variant carriers: 8293
genotype depth: GenotypeDepth
  all individuals: 4610
  bin: 2.25e1
  variant carriers: 1988
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.75e1
  variant carriers: 355
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 21267
  bin: 7.5e0
  variant carriers: 4936
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.25e1
  variant carriers: 464
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 1.75e1
  variant carriers: 5242
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 2.5e0
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 447
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.75e1
  variant carriers: 771
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.75e1
  variant carriers: 450
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
hgvs: p.Pro284Pro
num of homozygotes: 3329
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

9-140051241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051241
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051241
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 65882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.855C>T
  hgvsp: ENST00000371560.3:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.792C>T
  hgvsp: ENST00000371559.4:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.792C>T
  hgvsp: ENST00000315048.3:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.855C>T
  hgvsp: ENST00000371546.4:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.855C>T
  hgvsp: ENST00000371553.3:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1167C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.792C>T
  hgvsp: ENST00000350902.5:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.792C>T
  hgvsp: ENST00000371561.3:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.855C>T
  hgvsp: ENST00000371555.4:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.792C>T
  hgvsp: ENST00000371550.4:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22496
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.855C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff

9-140051245-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051245
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051245
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 66556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+3G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+3G>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16300
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22461
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
hgvs: c.856+3G>T
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

9-140051252-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051252
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051252
    reference: chr 9
allele count: 1
allele frequency: 1.491424310216256e-5
allele num: 67050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+10G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+10G>C
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2657
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

9-140051254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051254
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051254
    reference: chr 9
allele count: 1
allele frequency: 1.481657085284182e-5
allele num: 67492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+12G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22352
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

9-140051257-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051257
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051257
    reference: chr 9
allele count: 12
allele frequency: 1.759737212576255e-4
allele num: 68192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+15T>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+15T>C
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16214
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22301
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

9-140051261-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051261
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051262
    reference: chr 9
allele count: 2
allele frequency: 2.945681630729351e-5
allele num: 67896
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+23dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+23dupG
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7449
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS

9-140051262-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051262
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051262
    reference: chr 9
allele count: 2
allele frequency: 2.901325905939014e-5
allele num: 68934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+20G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+20G>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16048
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

9-140051265-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051265
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051265
    reference: chr 9
allele count: 1
allele frequency: 1.427225758570491e-5
allele num: 70066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+23G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+23G>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7051
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5759
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

9-140051271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051271
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051271
    reference: chr 9
allele count: 2
allele frequency: 2.777777777777778e-5
allele num: 72000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+29G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+29G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15557
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS

9-140051271-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051271
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051271
    reference: chr 9
allele count: 2
allele frequency: 2.777777777777778e-5
allele num: 72000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+29G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+29G>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15557
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

9-140051278-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051278
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051278
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 75508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.856+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.793+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.793+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.793+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.793+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.856+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.793+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.856+36G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.856+36G>C
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20020
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

9-140051280-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051280
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051280
    reference: chr 9
allele count: 8
allele frequency: 1.049731006429602e-4
allele num: 76210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.857-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.794-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.857-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1168+38G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.794-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.794-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.794-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.857-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.857-35G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.794-35G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12122
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19716
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14056
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

9-140051301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051301
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051301
    reference: chr 9
allele count: 5
allele frequency: 5.806121975010451e-5
allele num: 86116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.857-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.794-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.794-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.857-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1169-31G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.794-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.857-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.794-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.857-14G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.794-14G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20045
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15229
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3540
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

9-140051308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051308
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051308
    reference: chr 9
allele count: 1
allele frequency: 1.101831243526741e-5
allele num: 90758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.857-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.794-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.794-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1169-24C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.794-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.794-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.857-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.857-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.857-7C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.794-7C>T
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
hgvs: c.857-7C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

9-140051309-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051309
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051309
    reference: chr 9
allele count: 1
allele frequency: 1.093493712411154e-5
allele num: 91450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.794-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.857-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.794-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.857-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.857-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.794-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.794-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1169-23G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.794-6G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.857-6G>C
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
hgvs: c.857-6G>C
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/9-140051320-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051320
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051320
    reference: chr 9
allele count: 1
allele frequency: 1.023625271260697e-5
allele num: 97692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.799C>A
  hgvsp: ENSP00000360616.3:p.Leu267Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.799C>A
  hgvsp: ENSP00000360614.4:p.Leu267Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.799C>A
  hgvsp: ENSP00000316915.8:p.Leu267Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.862C>A
  hgvsp: ENSP00000360610.4:p.Leu288Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.799C>A
  hgvsp: ENSP00000360605.4:p.Leu267Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.862C>A
  hgvsp: ENSP00000360608.3:p.Leu288Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.862C>A
  hgvsp: ENSP00000360615.3:p.Leu288Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1169-12C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.799C>A
  hgvsp: ENSP00000316696.3:p.Leu267Ile
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.862C>A
  hgvsp: ENSP00000360601.4:p.Leu288Ile
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27895
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu288Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

9-140051323-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051323
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051323
    reference: chr 9
allele count: 1
allele frequency: 1.007333387057781e-5
allele num: 99272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.802G>C
  hgvsp: ENSP00000360605.4:p.Gly268Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.802G>C
  hgvsp: ENSP00000360616.3:p.Gly268Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.865G>C
  hgvsp: ENSP00000360601.4:p.Gly289Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1169-9G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.865G>C
  hgvsp: ENSP00000360608.3:p.Gly289Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.865G>C
  hgvsp: ENSP00000360615.3:p.Gly289Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.802G>C
  hgvsp: ENSP00000360614.4:p.Gly268Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.865G>C
  hgvsp: ENSP00000360610.4:p.Gly289Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.802G>C
  hgvsp: ENSP00000316696.3:p.Gly268Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.802G>C
  hgvsp: ENSP00000316915.8:p.Gly268Arg
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly289Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

9-140051326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051326
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051326
    reference: chr 9
allele count: 1
allele frequency: 9.891979582954141e-6
allele num: 101092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.805C>T
  hgvsp: ENST00000371559.4:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.805C>T
  hgvsp: ENST00000371550.4:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.805C>T
  hgvsp: ENST00000315048.3:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.868C>T
  hgvsp: ENST00000371560.3:c.868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1169-6C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.868C>T
  hgvsp: ENST00000371546.4:c.868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.805C>T
  hgvsp: ENST00000371561.3:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.868C>T
  hgvsp: ENST00000371555.4:c.868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.868C>T
  hgvsp: ENST00000371553.3:c.868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.805C>T
  hgvsp: ENST00000350902.5:c.805C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
hgvs: n.1169-6C>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

9-140051343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051343
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051343
    reference: chr 9
allele count: 3
allele frequency: 2.814153315072605e-5
allele num: 106604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.822C>T
  hgvsp: ENST00000371561.3:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.885C>T
  hgvsp: ENST00000371555.4:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.822C>T
  hgvsp: ENST00000350902.5:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.822C>T
  hgvsp: ENST00000315048.3:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.885C>T
  hgvsp: ENST00000371553.3:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1180C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.885C>T
  hgvsp: ENST00000371546.4:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.885C>T
  hgvsp: ENST00000371560.3:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.822C>T
  hgvsp: ENST00000371559.4:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.822C>T
  hgvsp: ENST00000371550.4:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31692
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7521
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly295Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

9-140051376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051376
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051376
    reference: chr 9
allele count: 30134
allele frequency: 2.678530159463832e-1
allele num: 112502
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.918G>A
  hgvsp: ENST00000371546.4:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.855G>A
  hgvsp: ENST00000371561.3:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.855G>A
  hgvsp: ENST00000350902.5:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.855G>A
  hgvsp: ENST00000371550.4:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.855G>A
  hgvsp: ENST00000371559.4:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.918G>A
  hgvsp: ENST00000371560.3:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.855G>A
  hgvsp: ENST00000315048.3:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.918G>A
  hgvsp: ENST00000371555.4:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.918G>A
  hgvsp: ENST00000371553.3:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1213G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 1.75e1
  variant carriers: 2318
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 1.25e1
  variant carriers: 1304
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 375
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 614
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.75e1
  variant carriers: 3206
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 3.25e1
  variant carriers: 3960
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 4.75e1
  variant carriers: 1491
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 926
genotype depth: GenotypeDepth
  all individuals: 12226
  bin: 2.75e1
  variant carriers: 4095
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.25e1
  variant carriers: 413
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 4.25e1
  variant carriers: 2222
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.5e0
  variant carriers: 523
genotype depth: GenotypeDepth
  all individuals: 21459
  bin: 2.25e1
  variant carriers: 3481
genotype quality: GenotypeQuality
hgvs: p.Val306Val
num of homozygotes: 4662
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

9-140051380-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051380
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051380
    reference: chr 9
allele count: 1
allele frequency: 8.947104716913606e-6
allele num: 111768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.859G>C
  hgvsp: ENSP00000360616.3:p.Val287Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.859G>C
  hgvsp: ENSP00000316696.3:p.Val287Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.922G>C
  hgvsp: ENSP00000360601.4:p.Val308Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.859G>C
  hgvsp: ENSP00000316915.8:p.Val287Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1217G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.922G>C
  hgvsp: ENSP00000360608.3:p.Val308Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.859G>C
  hgvsp: ENSP00000360614.4:p.Val287Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.859G>C
  hgvsp: ENSP00000360605.4:p.Val287Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.922G>C
  hgvsp: ENSP00000360610.4:p.Val308Leu
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.922G>C
  hgvsp: ENSP00000360615.3:p.Val308Leu
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19287
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val308Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

9-140051382-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051382
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051382
    reference: chr 9
allele count: 1
allele frequency: 8.953353030710001e-6
allele num: 111690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.861G>T
  hgvsp: ENST00000315048.3:c.861G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.924G>T
  hgvsp: ENST00000371555.4:c.924G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.861G>T
  hgvsp: ENST00000371559.4:c.861G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.924G>T
  hgvsp: ENST00000371553.3:c.924G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.861G>T
  hgvsp: ENST00000371550.4:c.861G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.861G>T
  hgvsp: ENST00000371561.3:c.861G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1219G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.924G>T
  hgvsp: ENST00000371546.4:c.924G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.861G>T
  hgvsp: ENST00000350902.5:c.861G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.924G>T
  hgvsp: ENST00000371560.3:c.924G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val308Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

9-140051385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051385
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051385
    reference: chr 9
allele count: 6
allele frequency: 5.377211378179276e-5
allele num: 111582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.864G>A
  hgvsp: ENST00000350902.5:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.864G>A
  hgvsp: ENST00000315048.3:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.927G>A
  hgvsp: ENST00000371553.3:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.927G>A
  hgvsp: ENST00000371546.4:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.864G>A
  hgvsp: ENST00000371550.4:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.864G>A
  hgvsp: ENST00000371561.3:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.927G>A
  hgvsp: ENST00000371555.4:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1222G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.927G>A
  hgvsp: ENST00000371560.3:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.864G>A
  hgvsp: ENST00000371559.4:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19230
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24182
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val309Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

9-140051391-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051391
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051391
    reference: chr 9
allele count: 1
allele frequency: 8.970057946574335e-6
allele num: 111482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.870G>T
  hgvsp: ENSP00000316696.3:p.Gln290His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.933G>T
  hgvsp: ENSP00000360601.4:p.Gln311His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.870G>T
  hgvsp: ENSP00000316915.8:p.Gln290His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.870G>T
  hgvsp: ENSP00000360605.4:p.Gln290His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.933G>T
  hgvsp: ENSP00000360610.4:p.Gln311His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.933G>T
  hgvsp: ENSP00000360615.3:p.Gln311His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.870G>T
  hgvsp: ENSP00000360614.4:p.Gln290His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.870G>T
  hgvsp: ENSP00000360616.3:p.Gln290His
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1228G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.933G>T
  hgvsp: ENSP00000360608.3:p.Gln311His
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gln311His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

9-140051400-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051400
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051400
    reference: chr 9
allele count: 2
allele frequency: 1.799208348326736e-5
allele num: 111160
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.942C>T
  hgvsp: ENST00000371553.3:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1237C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.879C>T
  hgvsp: ENST00000315048.3:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.879C>T
  hgvsp: ENST00000371561.3:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.942C>T
  hgvsp: ENST00000371555.4:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.942C>T
  hgvsp: ENST00000371560.3:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.879C>T
  hgvsp: ENST00000371550.4:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.879C>T
  hgvsp: ENST00000350902.5:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.942C>T
  hgvsp: ENST00000371546.4:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.879C>T
  hgvsp: ENST00000371559.4:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His314His
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

9-140051409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051409
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051409
    reference: chr 9
allele count: 8
allele frequency: 7.195668207738942e-5
allele num: 111178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.888C>T
  hgvsp: ENST00000371559.4:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.951C>T
  hgvsp: ENST00000371560.3:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1246C>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.951C>T
  hgvsp: ENST00000371546.4:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.951C>T
  hgvsp: ENST00000371555.4:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.888C>T
  hgvsp: ENST00000371561.3:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.951C>T
  hgvsp: ENST00000371553.3:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.888C>T
  hgvsp: ENST00000350902.5:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.888C>T
  hgvsp: ENST00000315048.3:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.888C>T
  hgvsp: ENST00000371550.4:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19660
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu317Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

9-140051432-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051432
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051432
    reference: chr 9
allele count: 1
allele frequency: 9.050920478612675e-6
allele num: 110486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.974C>G
  hgvsp: ENSP00000360610.4:p.Pro325Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.911C>G
  hgvsp: ENSP00000360614.4:p.Pro304Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.911C>G
  hgvsp: ENSP00000360605.4:p.Pro304Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1269C>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.974C>G
  hgvsp: ENSP00000360601.4:p.Pro325Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.974C>G
  hgvsp: ENSP00000360615.3:p.Pro325Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.911C>G
  hgvsp: ENSP00000316696.3:p.Pro304Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.911C>G
  hgvsp: ENSP00000360616.3:p.Pro304Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.911C>G
  hgvsp: ENSP00000316915.8:p.Pro304Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.974C>G
  hgvsp: ENSP00000360608.3:p.Pro325Arg
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.5C>G
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro325Arg
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

9-140051433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051433
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051433
    reference: chr 9
allele count: 16
allele frequency: 1.44767557590344e-4
allele num: 110522
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.975G>A
  hgvsp: ENST00000371546.4:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.975G>A
  hgvsp: ENST00000371560.3:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.912G>A
  hgvsp: ENST00000371550.4:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.912G>A
  hgvsp: ENST00000315048.3:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.912G>A
  hgvsp: ENST00000371561.3:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.912G>A
  hgvsp: ENST00000350902.5:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.975G>A
  hgvsp: ENST00000371555.4:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.975G>A
  hgvsp: ENST00000371553.3:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.912G>A
  hgvsp: ENST00000371559.4:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.6G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1270G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20622
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro325Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

9-140051439-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051439
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051439
    reference: chr 9
allele count: 1
allele frequency: 9.070459328060374e-6
allele num: 110248
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.981G>A
  hgvsp: ENST00000371553.3:c.981G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.981G>A
  hgvsp: ENST00000371560.3:c.981G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.918G>A
  hgvsp: ENST00000350902.5:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.981G>A
  hgvsp: ENST00000371555.4:c.981G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.918G>A
  hgvsp: ENST00000371550.4:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.918G>A
  hgvsp: ENST00000315048.3:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.981G>A
  hgvsp: ENST00000371546.4:c.981G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1276G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.918G>A
  hgvsp: ENST00000371559.4:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.12G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.918G>A
  hgvsp: ENST00000371561.3:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg327Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

9-140051441-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051441
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051441
    reference: chr 9
allele count: 2
allele frequency: 1.81402604941407e-5
allele num: 110252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.14G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.983G>T
  hgvsp: ENSP00000360608.3:p.Gly328Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.920G>T
  hgvsp: ENSP00000360614.4:p.Gly307Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.983G>T
  hgvsp: ENSP00000360601.4:p.Gly328Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1278G>T
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.983G>T
  hgvsp: ENSP00000360610.4:p.Gly328Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.920G>T
  hgvsp: ENSP00000360605.4:p.Gly307Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.983G>T
  hgvsp: ENSP00000360615.3:p.Gly328Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.920G>T
  hgvsp: ENSP00000360616.3:p.Gly307Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.920G>T
  hgvsp: ENSP00000316696.3:p.Gly307Val
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.920G>T
  hgvsp: ENSP00000316915.8:p.Gly307Val
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly328Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

9-140051469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051469
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051469
    reference: chr 9
allele count: 1
allele frequency: 9.421873822265771e-6
allele num: 106136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1011G>A
  hgvsp: ENST00000371546.4:c.1011G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1011G>A
  hgvsp: ENST00000371555.4:c.1011G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.948G>A
  hgvsp: ENST00000315048.3:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1011G>A
  hgvsp: ENST00000371553.3:c.1011G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.42G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.948G>A
  hgvsp: ENST00000371561.3:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.948G>A
  hgvsp: ENST00000371550.4:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.948G>A
  hgvsp: ENST00000350902.5:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1011G>A
  hgvsp: ENST00000371560.3:c.1011G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.948G>A
  hgvsp: ENST00000371559.4:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1306G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys337Lys
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

9-140051478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051478
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051478
    reference: chr 9
allele count: 1
allele frequency: 9.727437209392813e-6
allele num: 102802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1020G>A
  hgvsp: ENST00000371555.4:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1020G>A
  hgvsp: ENST00000371560.3:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1315G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.957G>A
  hgvsp: ENST00000315048.3:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1020G>A
  hgvsp: ENST00000371553.3:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.957G>A
  hgvsp: ENST00000371550.4:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.957G>A
  hgvsp: ENST00000350902.5:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.957G>A
  hgvsp: ENST00000371559.4:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1020G>A
  hgvsp: ENST00000371546.4:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.957G>A
  hgvsp: ENST00000371561.3:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.51G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro340Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

9-140051478-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051478
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051478
    reference: chr 9
allele count: 1
allele frequency: 9.727437209392813e-6
allele num: 102802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.957G>C
  hgvsp: ENST00000315048.3:c.957G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.957G>C
  hgvsp: ENST00000371550.4:c.957G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.957G>C
  hgvsp: ENST00000350902.5:c.957G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.957G>C
  hgvsp: ENST00000371561.3:c.957G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1020G>C
  hgvsp: ENST00000371553.3:c.1020G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1020G>C
  hgvsp: ENST00000371555.4:c.1020G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1020G>C
  hgvsp: ENST00000371560.3:c.1020G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1020G>C
  hgvsp: ENST00000371546.4:c.1020G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.957G>C
  hgvsp: ENST00000371559.4:c.957G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.51G>C
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1315G>C
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro340Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

9-140051495-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051495
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051496
    reference: chr 9
allele count: 4
allele frequency: 4.290924694271615e-5
allele num: 93220
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.968+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.968+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1031+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1031+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.968+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1031+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.968+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.968+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.62+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1031+10dupG
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1326+10dupG
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13770
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13792
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1031+10dupG
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/9-140051503-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051503
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051503
    reference: chr 9
allele count: 1
allele frequency: 1.140328870846352e-5
allele num: 87694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.968+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1031+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.968+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.968+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1031+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.62+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.968+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1326+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1031+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1031+14C>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.968+14C>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

9-140051508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051508
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051508
    reference: chr 9
allele count: 1
allele frequency: 1.202761540496981e-5
allele num: 83142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.62+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.968+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1031+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.968+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.968+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1326+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.968+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1031+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.968+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1031+19G>A
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1031+19G>A
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21061
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

9-140051509-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051509
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051509
    reference: chr 9
allele count: 2
allele frequency: 2.40517593861991e-5
allele num: 83154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  hgvsc: ENST00000315048.3:c.968+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  hgvsc: ENST00000371550.4:c.968+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  hgvsc: ENST00000471122.1:n.1326+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  hgvsc: ENST00000371546.4:c.1031+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  hgvsc: ENST00000350902.5:c.968+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  hgvsc: ENST00000371560.3:c.1031+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  hgvsc: ENST00000485413.1:n.62+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  hgvsc: ENST00000371561.3:c.968+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  hgvsc: ENST00000371555.4:c.1031+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  hgvsc: ENST00000371559.4:c.968+20A>G
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  hgvsc: ENST00000371553.3:c.1031+20A>G
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21081
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4670
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

9-140051511-CTGGGCGGGGCTGCTCTTGGGGAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051511
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051487
    reference: chr 9
allele count: 1
allele frequency: 1.267009603932798e-5
allele num: 78926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: CTGGGCGGGGCTGCTCTTGGGGAGG
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

9-140051511-CTGGGCGGGGCTGCTCTTGGGGAGGTGGGCGGGGTCACTCCAGAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140051511
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 140051466
    reference: chr 9
allele count: 3
allele frequency: 3.801028811798394e-5
allele num: 78926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000471122
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316696
  ensembl transcript: ENST00000315048
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360616
  ensembl transcript: ENST00000371561
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl transcript: ENST00000485413
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360615
  ensembl transcript: ENST00000371560
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000316915
  ensembl transcript: ENST00000350902
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360614
  ensembl transcript: ENST00000371559
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360605
  ensembl transcript: ENST00000371550
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360608
  ensembl transcript: ENST00000371553
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360601
  ensembl transcript: ENST00000371546
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176884
  ensembl protein: ENSP00000360610
  ensembl transcript: ENST00000371555
  gene symbol: GRIN1
  variant of: http://identifiers.org/hgnc/4584
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22982
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: CTGGGCGGGGCTGCTCTTGGGGAGGTGGGCGGGGTCACTCCAGAGA

GenotypeDepth
all individuals: 543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31460
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7596
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2954
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 4.504504504504505e-4
allele num: 6660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11786
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.212e1

FS
type: SiteQuality
SIO_000300: 9.629e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 1.279995e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.391999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

GenotypeQuality
all individuals: 197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7594
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11301
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24874
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3157
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1734
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.027326895418122e-4
allele num: 9734
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.69e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.695e0

DP
type: SiteQuality
SIO_000300: 1.090105e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.28e-2

QD
type: SiteQuality
SIO_000300: 1.563e1

GenotypeQuality
all individuals: 26116
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7594
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.535317825072474e-5
allele num: 28286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4998
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.42e0

FS
type: SiteQuality
SIO_000300: 6.02e-1

DP
type: SiteQuality
SIO_000300: 1.087099e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.28e-2

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 4723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3443
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19740
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5102
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 164
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.755545178613122e-5
allele num: 34264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.712e0

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

DP
type: SiteQuality
SIO_000300: 7.69429e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeQuality
all individuals: 375
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24972
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3921
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4899
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2709
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.67897918065816e-4
allele num: 5956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4816
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.395e0

QD
type: SiteQuality
SIO_000300: 4.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 7.97796e5

GenotypeQuality
all individuals: 1555
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 9.75e1
variant carriers: 28

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 28
allele frequency: 5.816368923971749e-3
allele num: 4814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.68e-1

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

FS
type: SiteQuality
SIO_000300: 4.232e0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

DP
type: SiteQuality
SIO_000300: 8.00319e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 8911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1448
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.698369565217391e-4
allele num: 5888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.441087613293051e-5
allele num: 10592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34284
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.255e-1

FS
type: SiteQuality
SIO_000300: 2.674e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.18e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 8.10926e5

QD
type: SiteQuality
SIO_000300: 7.09e0

GenotypeQuality
all individuals: 641
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25452
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34458
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.699524133242692e-4
allele num: 5884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 8.1265e5

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

FS
type: SiteQuality
SIO_000300: 2.632e0

VQSLOD
type: SiteQuality
SIO_000300: -2.748e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

MQ
type: SiteQuality
SIO_000300: 5.843e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

QD
type: SiteQuality
SIO_000300: 3.82e0

GenotypeQuality
all individuals: 2030
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4741
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
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GenotypeQuality
all individuals: 25819
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.808212812917465e-5
allele num: 34434
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.16142e5

VQSLOD
type: SiteQuality
SIO_000300: 3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 8.15e0

FS
type: SiteQuality
SIO_000300: 7.603e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-1

GenotypeQuality
all individuals: 1423
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4741
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
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variant carriers: 0

GenotypeQuality
all individuals: 9953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.808212812917465e-5
allele num: 34434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 8.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

FS
type: SiteQuality
SIO_000300: 7.603e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

DP
type: SiteQuality
SIO_000300: 8.16142e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

GenotypeQuality
all individuals: 1178
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.5e0
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GenotypeQuality
all individuals: 3546
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4628
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 7.75e1
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GenotypeQuality
all individuals: 1417
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 520
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GenotypeQuality
all individuals: 11291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26744
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.931247585940518e-4
allele num: 5178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34690
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0261e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.253e0

MQRankSum
type: SiteQuality
SIO_000300: -6.18e-1

DP
type: SiteQuality
SIO_000300: 8.24849e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.32e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.127e0

GenotypeQuality
all individuals: 432
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3599
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 3331
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 4506
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 482
bin: 4.75e1
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GenotypeQuality
all individuals: 27153
bin: 2.25e1
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GenotypeQuality
all individuals: 1427
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11443
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.059308072487644e-4
allele num: 4856
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.27e-1

FS
type: SiteQuality
SIO_000300: 6.229e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.05e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 8.29928e5

QD
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 367
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1125
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3548
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34682
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.748828491096532e-4
allele num: 10670
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e0

DP
type: SiteQuality
SIO_000300: 8.32952e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.028e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

FS
type: SiteQuality
SIO_000300: 2.213e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

GenotypeQuality
all individuals: 473
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4454
bin: 7.5e0
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GenotypeQuality
all individuals: 3260
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.883340061126809e-5
allele num: 34682
num of homozygotes: 0

South Asian
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allele frequency: 9.372071227741331e-5
allele num: 10670
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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FS
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele count: 2
allele frequency: 1.877229209686503e-4
allele num: 10654
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ClippingRankSum
type: SiteQuality
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DP
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -1.06e-2

BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 65

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 55
allele frequency: 1.64483521741731e-3
allele num: 33438
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 14
allele frequency: 1.339200306102927e-3
allele num: 10454
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 3.65e-1

VQSLOD
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ClippingRankSum
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SIO_000300: -1.82e-1

MQRankSum
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InbreedingCoeff
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SIO_000300: -1.19e-2

FS
type: SiteQuality
SIO_000300: 1.741e0

BaseQRankSum
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MQ
type: SiteQuality
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DP
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SIO_000300: 7.95553e5

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1374
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.851166234727879e-4
allele num: 32412
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.055e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 32164
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.012072434607646e-4
allele num: 4970
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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QD
type: SiteQuality
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQ
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 1.554533018281308e-4
allele num: 32164
num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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Other
type: Population
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QD
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

African
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Other
type: Population
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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VQSLOD
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SIO_000300: -2.216e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

DP
type: SiteQuality
SIO_000300: 7.45837e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

QD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

DP
type: SiteQuality
SIO_000300: 7.42236e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 7.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.62e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 247
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.519887363604365e-5
allele num: 28410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.463e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

QD
type: SiteQuality
SIO_000300: 7.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

DP
type: SiteQuality
SIO_000300: 7.18043e5

GenotypeQuality
all individuals: 3085
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.577049649449134e-5
allele num: 27956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4084
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 7.12325e5

FS
type: SiteQuality
SIO_000300: 3.473e0

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
type: SiteQuality
SIO_000300: 4.04e-1

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 355
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.659250585480094e-5
allele num: 27328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.241e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 7.10999e5

QD
type: SiteQuality
SIO_000300: 2.55e0

FS
type: SiteQuality
SIO_000300: 7.207599999999999e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.99e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.608e1

MQ
type: SiteQuality
SIO_000300: 5.93e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.074e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 4

East Asian
type: Population
allele count: 109
allele frequency: 3.395638629283489e-2
allele num: 3210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1078
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.420135527589545e-4
allele num: 4132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 7.055171440666009e-5
allele num: 28348
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.717391304347826e-3
allele num: 368
num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.41e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1216
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.329e1

DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

FS
type: SiteQuality
SIO_000300: 7.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

BaseQRankSum
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SIO_000300: -2.025e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 243
bin: 8.25e1
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GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 5.263157894736842e-3
allele num: 380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.415767181308922e-5
allele num: 29276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1216
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 2.73224043715847e-3
allele num: 3294
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 7.37078e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.025e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

FS
type: SiteQuality
SIO_000300: 7.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

QD
type: SiteQuality
SIO_000300: 1.329e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 403
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GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 7.75e1
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GenotypeQuality
all individuals: 1913
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variant carriers: 1

GenotypeQuality
all individuals: 1166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.260089978483406e-5
allele num: 30674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.892e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

QD
type: SiteQuality
SIO_000300: 2.58e0

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 7.5857e5

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 81

GenotypeQuality
all individuals: 3380
bin: 7.5e0
variant carriers: 240

GenotypeQuality
all individuals: 1477
bin: 3.75e1
variant carriers: 662

GenotypeQuality
all individuals: 17043
bin: 2.25e1
variant carriers: 674

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 325

GenotypeQuality
all individuals: 1177
bin: 1.25e1
variant carriers: 292

GenotypeQuality
all individuals: 2693
bin: 2.75e1
variant carriers: 445

GenotypeQuality
all individuals: 2658
bin: 3.25e1
variant carriers: 732

GenotypeQuality
all individuals: 609
bin: 7.75e1
variant carriers: 455

GenotypeQuality
all individuals: 604
bin: 4.25e1
variant carriers: 379

GenotypeQuality
all individuals: 2510
bin: 2.5e0
variant carriers: 111

GenotypeQuality
all individuals: 5068
bin: 6.25e1
variant carriers: 457

GenotypeQuality
all individuals: 510
bin: 5.75e1
variant carriers: 412

GenotypeQuality
all individuals: 1152
bin: 6.75e1
variant carriers: 340

GenotypeQuality
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bin: 5.25e1
variant carriers: 590

GenotypeQuality
all individuals: 882
bin: 4.75e1
variant carriers: 665

GenotypeQuality
all individuals: 15287
bin: 9.75e1
variant carriers: 15227

GenotypeQuality
all individuals: 614
bin: 8.25e1
variant carriers: 551

GenotypeQuality
all individuals: 654
bin: 8.75e1
variant carriers: 641

GenotypeQuality
all individuals: 615
bin: 9.25e1
variant carriers: 603

GenotypeQuality
all individuals: 1583
bin: 1.75e1
variant carriers: 548

South Asian
type: Population
allele count: 2953
allele frequency: 2.623955926781589e-1
allele num: 11254
num of homozygotes: 368

East Asian
type: Population
allele count: 8
allele frequency: 2.34192037470726e-3
allele num: 3416
num of homozygotes: 0

Latino
type: Population
allele count: 1521
allele frequency: 2.807308970099668e-1
allele num: 5418
num of homozygotes: 132

European (Finnish)
type: Population
allele count: 1315
allele frequency: 5.148786217697729e-1
allele num: 2554
num of homozygotes: 248

African
type: Population
allele count: 440
allele frequency: 8.939455505891913e-2
allele num: 4922
num of homozygotes: 13

Other
type: Population
allele count: 179
allele frequency: 3.744769874476988e-1
allele num: 478
num of homozygotes: 32

European (Non-Finnish)
type: Population
allele count: 15642
allele frequency: 4.046251746081018e-1
allele num: 38658
num of homozygotes: 2536

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

FS
type: SiteQuality
SIO_000300: 1.091e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.51e-2

DP
type: SiteQuality
SIO_000300: 8.4261e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.52e-1

QD
type: SiteQuality
SIO_000300: 1.768e1

VQSLOD
type: SiteQuality
SIO_000300: 5.2e0

GenotypeDepth
all individuals: 80
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 406
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GenotypeQuality
all individuals: 1064
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
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GenotypeQuality
all individuals: 798
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variant carriers: 0

GenotypeQuality
all individuals: 4033
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GenotypeQuality
all individuals: 3149
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variant carriers: 0

GenotypeQuality
all individuals: 1574
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 6453
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GenotypeQuality
all individuals: 2330
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variant carriers: 0

GenotypeQuality
all individuals: 23935
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GenotypeQuality
all individuals: 1262
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variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
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variant carriers: 0

GenotypeQuality
all individuals: 4994
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variant carriers: 0

GenotypeQuality
all individuals: 397
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variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3470
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 5.572e1

FS
type: SiteQuality
SIO_000300: 2.808e0

VQSLOD
type: SiteQuality
SIO_000300: -1.803e0

DP
type: SiteQuality
SIO_000300: 8.12589e5

QD
type: SiteQuality
SIO_000300: 6.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

GenotypeQuality
all individuals: 6749
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
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variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
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GenotypeQuality
all individuals: 1379
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variant carriers: 0

GenotypeQuality
all individuals: 3186
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variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 383
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variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 213
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variant carriers: 0

GenotypeQuality
all individuals: 5043
bin: 2.75e1
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GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
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variant carriers: 0

GenotypeQuality
all individuals: 24182
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variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
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variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5651
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38228
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -2.444e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.16176e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.04e0

GenotypeQuality
all individuals: 3238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
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variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
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variant carriers: 0

GenotypeQuality
all individuals: 5095
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5729
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23481
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6392
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.607833933135138e-5
allele num: 38346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.192e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

DP
type: SiteQuality
SIO_000300: 8.22995e5

MQ
type: SiteQuality
SIO_000300: 5.89e1

QD
type: SiteQuality
SIO_000300: 1.098e1

GenotypeQuality
all individuals: 1573
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 752
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 380
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GenotypeQuality
all individuals: 3557
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7013
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variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.725923369002416e-4
allele num: 5794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.26245e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

GenotypeQuality
all individuals: 5761
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24358
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variant carriers: 0

GenotypeQuality
all individuals: 3234
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GenotypeQuality
all individuals: 192
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GenotypeQuality
all individuals: 1768
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 1276
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
all individuals: 1216
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GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.926782273603083e-4
allele num: 5190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.571355104139882e-4
allele num: 38890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.70299727520436e-4
allele num: 5872
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.42e-1

DP
type: SiteQuality
SIO_000300: 8.31491e5

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.103e1

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

FS
type: SiteQuality
SIO_000300: 3.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5665
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3209
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1570
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GenotypeQuality
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GenotypeQuality
all individuals: 1212
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GenotypeQuality
all individuals: 724
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GenotypeQuality
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GenotypeQuality
all individuals: 140
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GenotypeQuality
all individuals: 1212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.177055290950507e-5
allele num: 38632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5174
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.31e-1

DP
type: SiteQuality
SIO_000300: 8.4063e5

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

QD
type: SiteQuality
SIO_000300: 3.092e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

FS
type: SiteQuality
SIO_000300: 2.56e0

GenotypeQuality
all individuals: 1088
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24205
bin: 2.25e1
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GenotypeQuality
all individuals: 1194
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.549459514582908e-5
allele num: 39224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.718395815170009e-5
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.98e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -9.1e-3

FS
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.46467e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.442598925256473e-4
allele num: 4094
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39772
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.51729e5

VQSLOD
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ReadPosRankSum
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SIO_000300: -8.31e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
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SIO_000300: 1.935e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

QD
type: SiteQuality
SIO_000300: 8.51e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 3.598416696653472e-4
allele num: 5558
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40752
num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.061e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.127932436659368e-4
allele num: 6394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11774
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 8.78846e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

QD
type: SiteQuality
SIO_000300: 3.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
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SIO_000300: -2.694e0

DP
type: SiteQuality
SIO_000300: 9.20943e5

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.662439388287953e-5
allele num: 42896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 8.605851979345956e-4
allele num: 6972
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12188
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2868
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 9.30158e5

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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VQSLOD
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MQRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.480165778567199e-4
allele num: 6756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.158868787689748e-5
allele num: 48090
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.528117359413203e-4
allele num: 13088
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
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DP
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 8778
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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East Asian
type: Population
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Other
type: Population
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European (Non-Finnish)
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allele num: 50664
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European (Finnish)
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BaseQRankSum
type: SiteQuality
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QD
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.959631589261219e-5
allele num: 51030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.107e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.067e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

DP
type: SiteQuality
SIO_000300: 1.123858e6

QD
type: SiteQuality
SIO_000300: 9.99e0

GenotypeQuality
all individuals: 743
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.845018450184502e-5
allele num: 54200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7200
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 3.257e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.279e1

DP
type: SiteQuality
SIO_000300: 1.200264e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9846
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.968641114982578e-5
allele num: 14350
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.944e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1369e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 1.223465e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1002
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.786671431123816e-5
allele num: 55970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

VQSLOD
type: SiteQuality
SIO_000300: -3.725e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 6.76e0

DP
type: SiteQuality
SIO_000300: 1.24496e6

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 1172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4225
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GenotypeQuality
all individuals: 1200
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4726
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.846840007591573e-4
allele num: 10538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15186
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.83e0

VQSLOD
type: SiteQuality
SIO_000300: -6.488e-1

FS
type: SiteQuality
SIO_000300: 8.149999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.171e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.317625e6

GenotypeDepth
all individuals: 187
bin: 8.25e1
variant carriers: 186

GenotypeQuality
all individuals: 618
bin: 2.75e1
variant carriers: 104

GenotypeQuality
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variant carriers: 123

GenotypeQuality
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GenotypeQuality
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variant carriers: 199

GenotypeQuality
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GenotypeQuality
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variant carriers: 367

GenotypeQuality
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variant carriers: 94

GenotypeQuality
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variant carriers: 340

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 272

GenotypeQuality
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GenotypeQuality
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variant carriers: 221

GenotypeQuality
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GenotypeQuality
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variant carriers: 73

GenotypeQuality
all individuals: 686
bin: 3.25e1
variant carriers: 136

GenotypeQuality
all individuals: 484
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variant carriers: 373

GenotypeQuality
all individuals: 22303
bin: 9.75e1
variant carriers: 22250

South Asian
type: Population
allele count: 3611
allele frequency: 2.258004002001001e-1
allele num: 15992
num of homozygotes: 438

European (Non-Finnish)
type: Population
allele count: 21108
allele frequency: 3.409355213851919e-1
allele num: 61912
num of homozygotes: 3500

Other
type: Population
allele count: 243
allele frequency: 3.029925187032419e-1
allele num: 802
num of homozygotes: 42

Latino
type: Population
allele count: 2168
allele frequency: 1.968046477850399e-1
allele num: 11016
num of homozygotes: 202

East Asian
type: Population
allele count: 9
allele frequency: 1.093560145808019e-3
allele num: 8230
num of homozygotes: 0

African
type: Population
allele count: 543
allele frequency: 6.09154139555755e-2
allele num: 8914
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 2452
allele frequency: 4.350603264726757e-1
allele num: 5636
num of homozygotes: 467

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

FS
type: SiteQuality
SIO_000300: 5.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

QD
type: SiteQuality
SIO_000300: 1.611e1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

DP
type: SiteQuality
SIO_000300: 1.651265e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.099999999999999e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1027
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.629248264850598e-5
allele num: 61378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.278e0

QD
type: SiteQuality
SIO_000300: 1.086e1

DP
type: SiteQuality
SIO_000300: 1.369433e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 100
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GenotypeQuality
all individuals: 128
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.630098131907541e-5
allele num: 61346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8864
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
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SIO_000300: 1.367029e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-1

FS
type: SiteQuality
SIO_000300: 2.434e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

QD
type: SiteQuality
SIO_000300: 7.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61244
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11014
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.045949214026602e-4
allele num: 8270
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2672348959639e-5
allele num: 15956
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8870
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.204e0

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

FS
type: SiteQuality
SIO_000300: 8.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.364762e6

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8868
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.079353550027238e-5
allele num: 11014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.108e0

BaseQRankSum
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SIO_000300: -1.977e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

InbreedingCoeff
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SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

DP
type: SiteQuality
SIO_000300: 1.363025e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.81e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.281162844111953e-5
allele num: 60954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.301e1

VQSLOD
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SIO_000300: 4.77e0

DP
type: SiteQuality
SIO_000300: 1.364402e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.996252810392206e-4
allele num: 16012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ReadPosRankSum
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SIO_000300: -2.22e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

ClippingRankSum
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SIO_000300: 3.08e-1

FS
type: SiteQuality
SIO_000300: 2.415e0

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
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SIO_000300: 1.36927e6

BaseQRankSum
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SIO_000300: -5.8e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.652674026574998e-5
allele num: 60508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

ClippingRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 8.96e-1

BaseQRankSum
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DP
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InbreedingCoeff
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SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.98294665873488e-4
allele num: 60516
num of homozygotes: 0

European (Finnish)
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allele count: 4
allele frequency: 7.6103500761035e-4
allele num: 5256
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -6.43e-1

QD
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InbreedingCoeff
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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FS
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SIO_000300: 0.0e0

DP
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SIO_000300: 1.380902e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.264094211976948e-5
allele num: 15964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5216
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60374
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11022
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

DP
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MQ
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SIO_000300: 6.0e1

VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.656122685568547e-5
allele num: 60382
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele frequency: 9.077705156136529e-5
allele num: 11016
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.624e0

MQ
type: SiteQuality
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.715383559763963e-5
allele num: 58296
num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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DP
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -3.5e-3

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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European (Finnish)
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4496
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10448
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 56564
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

African
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num of homozygotes: 0

South Asian
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allele num: 15110
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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FS
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DP
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QD
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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SIO_000300: 5.659999999999999e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 51384
num of homozygotes: 0

South Asian
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Other
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FS
type: SiteQuality
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QD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13674
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3518
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 1.470155836518671e-4
allele num: 6802
num of homozygotes: 0

Latino
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
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Other
type: Population
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African
type: Population
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allele frequency: 1.826150474799123e-4
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 365
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.180637544273908e-4
allele num: 8470
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.82882223847842e-4
allele num: 5468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13226
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.894e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.53e-1

QD
type: SiteQuality
SIO_000300: 1.451e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.24e-2

FS
type: SiteQuality
SIO_000300: 1.5558e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

DP
type: SiteQuality
SIO_000300: 8.56664e5

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6259
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24290
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 565
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2432
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8644
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.956947162426615e-4
allele num: 5110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.375e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

DP
type: SiteQuality
SIO_000300: 7.81655e5

MQ
type: SiteQuality
SIO_000300: 5.787e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1