5-140070446-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070446
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070446
    reference: chr 5
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.174C>A
  hgvsp: ENST00000431330.2:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.209C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.174C>A
  hgvsp: ENST00000512396.1:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.174C>A
  hgvsp: ENST00000507746.1:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.211C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-313C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.174C>A
  hgvsp: ENST00000504156.1:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.166C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.174C>A
  hgvsp: ENST00000415192.2:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.174C>A
  hgvsp: ENST00000438307.2:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.174C>A
  hgvsp: ENST00000307633.3:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.174C>A
  hgvsp: ENST00000457527.2:c.174C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr58Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-140070446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070446
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070446
    reference: chr 5
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.166C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.174C>T
  hgvsp: ENST00000507746.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.174C>T
  hgvsp: ENST00000438307.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.174C>T
  hgvsp: ENST00000431330.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.174C>T
  hgvsp: ENST00000457527.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.174C>T
  hgvsp: ENST00000415192.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.209C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.174C>T
  hgvsp: ENST00000512396.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.174C>T
  hgvsp: ENST00000504156.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.174C>T
  hgvsp: ENST00000307633.3:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.211C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-313C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr58Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

5-140070448-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070448
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070448
    reference: chr 5
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.172A>G
  hgvsp: ENSP00000411511.2:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.172A>G
  hgvsp: ENSP00000387893.2:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.172A>G
  hgvsp: ENSP00000411085.2:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.164A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.172A>G
  hgvsp: ENSP00000393244.2:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.172A>G
  hgvsp: ENSP00000304668.3:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-315A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.172A>G
  hgvsp: ENSP00000425889.1:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.172A>G
  hgvsp: ENSP00000425634.1:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.172A>G
  hgvsp: ENSP00000421576.1:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.209A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.207A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr58Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-140070451-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070451
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070451
    reference: chr 5
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-318A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.169A>G
  hgvsp: ENSP00000387893.2:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.206A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.169A>G
  hgvsp: ENSP00000304668.3:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.169A>G
  hgvsp: ENSP00000411511.2:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.169A>G
  hgvsp: ENSP00000393244.2:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.169A>G
  hgvsp: ENSP00000425634.1:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.169A>G
  hgvsp: ENSP00000411085.2:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.169A>G
  hgvsp: ENSP00000425889.1:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.161A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.169A>G
  hgvsp: ENSP00000421576.1:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.204A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys57Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-140070455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070455
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070455
    reference: chr 5
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.165G>A
  hgvsp: ENST00000457527.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.165G>A
  hgvsp: ENST00000431330.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.165G>A
  hgvsp: ENST00000512396.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.165G>A
  hgvsp: ENST00000504156.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-322G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.202G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.157G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.165G>A
  hgvsp: ENST00000507746.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.165G>A
  hgvsp: ENST00000438307.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.165G>A
  hgvsp: ENST00000415192.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.165G>A
  hgvsp: ENST00000307633.3:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.200G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val55Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-140070465-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070465
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070465
    reference: chr 5
allele count: 25
allele frequency: 2.059647388367112e-4
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.155A>C
  hgvsp: ENSP00000387893.2:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.155A>C
  hgvsp: ENSP00000411511.2:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-332A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.155A>C
  hgvsp: ENSP00000425889.1:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.190A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.155A>C
  hgvsp: ENSP00000304668.3:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.155A>C
  hgvsp: ENSP00000421576.1:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.155A>C
  hgvsp: ENSP00000393244.2:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.147A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.192A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.155A>C
  hgvsp: ENSP00000411085.2:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.155A>C
  hgvsp: ENSP00000425634.1:p.Gln52Pro
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln52Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-140070480-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070480
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070480
    reference: chr 5
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-347C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.140C>T
  hgvsp: ENSP00000425634.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.140C>T
  hgvsp: ENSP00000304668.3:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.140C>T
  hgvsp: ENSP00000411511.2:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.132C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.140C>T
  hgvsp: ENSP00000421576.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.140C>T
  hgvsp: ENSP00000393244.2:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.175C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.140C>T
  hgvsp: ENSP00000387893.2:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.140C>T
  hgvsp: ENSP00000425889.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.140C>T
  hgvsp: ENSP00000411085.2:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.177C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro47Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-140070486-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070486
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070486
    reference: chr 5
allele count: 3
allele frequency: 2.471821237888076e-5
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.126T>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.134T>C
  hgvsp: ENSP00000425634.1:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.134T>C
  hgvsp: ENSP00000411085.2:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.134T>C
  hgvsp: ENSP00000421576.1:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.134T>C
  hgvsp: ENSP00000411511.2:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.134T>C
  hgvsp: ENSP00000387893.2:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.134T>C
  hgvsp: ENSP00000304668.3:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.134T>C
  hgvsp: ENSP00000393244.2:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.169T>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.134T>C
  hgvsp: ENSP00000425889.1:p.Leu45Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.171T>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-353T>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu45Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS

5-140070488-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070488
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070488
    reference: chr 5
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.132G>A
  hgvsp: ENST00000457527.2:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.132G>A
  hgvsp: ENST00000307633.3:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.132G>A
  hgvsp: ENST00000431330.2:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.132G>A
  hgvsp: ENST00000507746.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.132G>A
  hgvsp: ENST00000512396.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-355G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.132G>A
  hgvsp: ENST00000438307.2:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.132G>A
  hgvsp: ENST00000415192.2:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.167G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.124G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.132G>A
  hgvsp: ENST00000504156.1:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.169G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln44Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-140070490-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070490
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070490
    reference: chr 5
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.167C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.130C>T
  hgvsp: ENSP00000387893.2:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-357C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.130C>T
  hgvsp: ENSP00000393244.2:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.130C>T
  hgvsp: ENSP00000425634.1:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.130C>T
  hgvsp: ENSP00000425889.1:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.130C>T
  hgvsp: ENSP00000411085.2:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.122C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.130C>T
  hgvsp: ENSP00000411511.2:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.165C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.130C>T
  hgvsp: ENSP00000304668.3:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.130C>T
  hgvsp: ENSP00000421576.1:p.Gln44Ter
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln44Ter
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

5-140070491-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070491
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070491
    reference: chr 5
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.129A>C
  hgvsp: ENST00000504156.1:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.129A>C
  hgvsp: ENST00000307633.3:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.129A>C
  hgvsp: ENST00000415192.2:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.129A>C
  hgvsp: ENST00000431330.2:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.129A>C
  hgvsp: ENST00000512396.1:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.129A>C
  hgvsp: ENST00000457527.2:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.129A>C
  hgvsp: ENST00000438307.2:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.166A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.164A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.129A>C
  hgvsp: ENST00000507746.1:c.129A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.121A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-358A>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala43Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

5-140070505-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070505
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070505
    reference: chr 5
allele count: 2
allele frequency: 1.648396933981703e-5
allele num: 121330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.115C>T
  hgvsp: ENST00000457527.2:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.115C>T
  hgvsp: ENST00000431330.2:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.152C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.115C>T
  hgvsp: ENST00000504156.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.150C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-372C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.115C>T
  hgvsp: ENST00000512396.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.115C>T
  hgvsp: ENST00000507746.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.115C>T
  hgvsp: ENST00000307633.3:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.115C>T
  hgvsp: ENST00000438307.2:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.107C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.115C>T
  hgvsp: ENST00000415192.2:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu39Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

5-140070512-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070512
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070512
    reference: chr 5
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.108G>A
  hgvsp: ENST00000431330.2:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.108G>A
  hgvsp: ENST00000507746.1:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-379G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.108G>A
  hgvsp: ENST00000457527.2:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.100G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.108G>A
  hgvsp: ENST00000415192.2:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.108G>A
  hgvsp: ENST00000504156.1:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.108G>A
  hgvsp: ENST00000438307.2:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.143G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.108G>A
  hgvsp: ENST00000512396.1:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.108G>A
  hgvsp: ENST00000307633.3:c.108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.145G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala36Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

5-140070517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070517
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070517
    reference: chr 5
allele count: 15
allele frequency: 1.236542297990207e-4
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.103G>A
  hgvsp: ENSP00000387893.2:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.103G>A
  hgvsp: ENSP00000304668.3:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.103G>A
  hgvsp: ENSP00000425889.1:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.138G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.103G>A
  hgvsp: ENSP00000425634.1:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.103G>A
  hgvsp: ENSP00000411511.2:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.103G>A
  hgvsp: ENSP00000421576.1:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.103G>A
  hgvsp: ENSP00000393244.2:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.103G>A
  hgvsp: ENSP00000411085.2:p.Val35Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.140G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.95G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-384G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val35Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-140070520-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070520
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070520
    reference: chr 5
allele count: 2
allele frequency: 1.648804616652927e-5
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.100G>C
  hgvsp: ENSP00000411085.2:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.100G>C
  hgvsp: ENSP00000411511.2:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.100G>C
  hgvsp: ENSP00000387893.2:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.137G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.100G>C
  hgvsp: ENSP00000393244.2:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-387G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.100G>C
  hgvsp: ENSP00000304668.3:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.135G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.92G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.100G>C
  hgvsp: ENSP00000425889.1:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.100G>C
  hgvsp: ENSP00000421576.1:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.100G>C
  hgvsp: ENSP00000425634.1:p.Glu34Gln
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu34Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

5-140070527-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070527
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070527
    reference: chr 5
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.93C>G
  hgvsp: ENSP00000387893.2:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.93C>G
  hgvsp: ENSP00000425634.1:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.93C>G
  hgvsp: ENSP00000425889.1:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.93C>G
  hgvsp: ENSP00000304668.3:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.93C>G
  hgvsp: ENSP00000411511.2:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.128C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.93C>G
  hgvsp: ENSP00000411085.2:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.93C>G
  hgvsp: ENSP00000393244.2:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.93C>G
  hgvsp: ENSP00000421576.1:p.Ile31Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-394C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.130C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.85C>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile31Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

5-140070533-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070533
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070533
    reference: chr 5
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-4A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.91-4A>G
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

5-140070539-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070539
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070539
    reference: chr 5
allele count: 1
allele frequency: 8.259411599517651e-6
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-10C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-10C>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

5-140070545-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070545
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070544
    reference: chr 5
allele count: 21
allele frequency: 1.7362546506821e-4
allele num: 120950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-17delC
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-17delC
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20503
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17057
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7407
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: AG
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-140070546-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070546
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070546
    reference: chr 5
allele count: 1
allele frequency: 8.271572260455268e-6
allele num: 120896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-17C>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-140070547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070547
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070547
    reference: chr 5
allele count: 1
allele frequency: 8.273899157717065e-6
allele num: 120862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-18C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-18C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

5-140070550-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070550
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070550
    reference: chr 5
allele count: 29
allele frequency: 2.401059778108958e-4
allele num: 120780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-21G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-21G>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7369
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16861
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20130
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 1
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-140070556-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070556
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070556
    reference: chr 5
allele count: 1
allele frequency: 8.292974192264313e-6
allele num: 120584
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-27A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

5-140070567-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070567
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070567
    reference: chr 5
allele count: 2
allele frequency: 1.666222340709144e-5
allele num: 120032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-38G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

5-140070571-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070571
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070571
    reference: chr 5
allele count: 1
allele frequency: 8.377594960038872e-6
allele num: 119366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-42G>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13261
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-140070581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070581
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070581
    reference: chr 5
allele count: 4
allele frequency: 3.357732858773756e-5
allele num: 119128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.128-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.83-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.126-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-396-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.91-52G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

5-140070751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070751
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070751
    reference: chr 5
allele count: 1
allele frequency: 9.09338910611985e-6
allele num: 109970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+49C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8576
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-140070758-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070758
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070758
    reference: chr 5
allele count: 3
allele frequency: 2.718080672634364e-5
allele num: 110372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+42G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+42G>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20619
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP

5-140070772-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070772
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070773
    reference: chr 5
allele count: 22
allele frequency: 1.975290906478954e-4
allele num: 111376
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+27dupG
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+27dupG
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16313
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26157
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-140070781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070781
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070781
    reference: chr 5
allele count: 1
allele frequency: 8.888730867006808e-6
allele num: 112502
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+19G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+19G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

5-140070782-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070782
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070782
    reference: chr 5
allele count: 1
allele frequency: 8.880994671403197e-6
allele num: 112600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+18G>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

5-140070784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070784
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070784
    reference: chr 5
allele count: 1
allele frequency: 8.866191438805547e-6
allele num: 112788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+16C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+16C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

5-140070786-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070786
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070786
    reference: chr 5
allele count: 3
allele frequency: 2.652519893899204e-5
allele num: 113100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+14A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+14A>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28006
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

5-140070787-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070787
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070787
    reference: chr 5
allele count: 1
allele frequency: 8.838763280241829e-6
allele num: 113138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+13C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/5-140070795-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070795
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070795
    reference: chr 5
allele count: 1
allele frequency: 8.782098570274352e-6
allele num: 113868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+5G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+5G>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18363
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.90+5G>T
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

5-140070796-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070796
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070796
    reference: chr 5
allele count: 3
allele frequency: 2.631763632535617e-5
allele num: 113992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.82+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.125+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.127+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.90+4A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-397+4A>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18408
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.90+4A>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ

5-140070805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070805
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070805
    reference: chr 5
allele count: 1
allele frequency: 8.715356458079136e-6
allele num: 114740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.85G>A
  hgvsp: ENSP00000421576.1:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.122G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.85G>A
  hgvsp: ENSP00000393244.2:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.85G>A
  hgvsp: ENSP00000387893.2:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.85G>A
  hgvsp: ENSP00000425889.1:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.85G>A
  hgvsp: ENSP00000411511.2:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.85G>A
  hgvsp: ENSP00000411085.2:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.85G>A
  hgvsp: ENSP00000304668.3:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-402G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.120G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.77G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.85G>A
  hgvsp: ENSP00000425634.1:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu29Lys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

5-140070816-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070816
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070816
    reference: chr 5
allele count: 2
allele frequency: 1.723424789742176e-5
allele num: 116048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.74A>G
  hgvsp: ENSP00000411511.2:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.74A>G
  hgvsp: ENSP00000304668.3:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.74A>G
  hgvsp: ENSP00000425634.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-413A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.74A>G
  hgvsp: ENSP00000425889.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.74A>G
  hgvsp: ENSP00000421576.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.66A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.109A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.74A>G
  hgvsp: ENSP00000411085.2:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.74A>G
  hgvsp: ENSP00000393244.2:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.111A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.74A>G
  hgvsp: ENSP00000387893.2:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19478
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys25Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

5-140070818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070818
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070818
    reference: chr 5
allele count: 22
allele frequency: 1.891919782601218e-4
allele num: 116284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-415G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.72G>A
  hgvsp: ENST00000438307.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.72G>A
  hgvsp: ENST00000504156.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.72G>A
  hgvsp: ENST00000431330.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.72G>A
  hgvsp: ENST00000457527.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.72G>A
  hgvsp: ENST00000512396.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.72G>A
  hgvsp: ENST00000507746.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.64G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.109G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.107G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.72G>A
  hgvsp: ENST00000415192.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.72G>A
  hgvsp: ENST00000307633.3:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19533
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln24Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

5-140070829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070829
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070829
    reference: chr 5
allele count: 1
allele frequency: 8.550516451193652e-6
allele num: 116952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.61C>T
  hgvsp: ENSP00000411085.2:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.61C>T
  hgvsp: ENSP00000387893.2:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.61C>T
  hgvsp: ENSP00000411511.2:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.96C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.61C>T
  hgvsp: ENSP00000425634.1:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.98C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.61C>T
  hgvsp: ENSP00000425889.1:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.61C>T
  hgvsp: ENSP00000393244.2:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.61C>T
  hgvsp: ENSP00000304668.3:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.61C>T
  hgvsp: ENSP00000421576.1:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.53C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-426C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu21Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

5-140070832-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070832
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070832
    reference: chr 5
allele count: 2
allele frequency: 1.709167977028783e-5
allele num: 117016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.95G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.58G>A
  hgvsp: ENSP00000421576.1:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.93G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-429G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.58G>A
  hgvsp: ENSP00000393244.2:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.58G>A
  hgvsp: ENSP00000304668.3:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.58G>A
  hgvsp: ENSP00000425889.1:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.58G>A
  hgvsp: ENSP00000387893.2:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.58G>A
  hgvsp: ENSP00000411511.2:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.58G>A
  hgvsp: ENSP00000411085.2:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.50G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.58G>A
  hgvsp: ENSP00000425634.1:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20074
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly20Ser
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

5-140070838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070838
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070838
    reference: chr 5
allele count: 5
allele frequency: 4.265774835341091e-5
allele num: 117212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.52G>A
  hgvsp: ENSP00000304668.3:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.52G>A
  hgvsp: ENSP00000411511.2:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.87G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.52G>A
  hgvsp: ENSP00000393244.2:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.89G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.52G>A
  hgvsp: ENSP00000425889.1:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.44G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.52G>A
  hgvsp: ENSP00000425634.1:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.52G>A
  hgvsp: ENSP00000387893.2:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-435G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.52G>A
  hgvsp: ENSP00000421576.1:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.52G>A
  hgvsp: ENSP00000411085.2:p.Val18Met
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20121
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val18Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

5-140070850-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070850
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070850
    reference: chr 5
allele count: 129
allele frequency: 1.10309207825968e-3
allele num: 116944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.40C>A
  hgvsp: ENSP00000411511.2:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.77C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.75C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.40C>A
  hgvsp: ENSP00000393244.2:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.32C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.40C>A
  hgvsp: ENSP00000411085.2:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.40C>A
  hgvsp: ENSP00000304668.3:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.40C>A
  hgvsp: ENSP00000421576.1:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.40C>A
  hgvsp: ENSP00000425889.1:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-447C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.40C>A
  hgvsp: ENSP00000387893.2:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.40C>A
  hgvsp: ENSP00000425634.1:p.Gln14Lys
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20343
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29660
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln14Lys
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

5-140070862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070862
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070862
    reference: chr 5
allele count: 1
allele frequency: 8.634982039237358e-6
allele num: 115808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.20C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.28C>T
  hgvsp: ENST00000457527.2:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.28C>T
  hgvsp: ENST00000507746.1:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-459C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.65C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.28C>T
  hgvsp: ENST00000307633.3:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.28C>T
  hgvsp: ENST00000438307.2:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.63C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.28C>T
  hgvsp: ENST00000512396.1:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.28C>T
  hgvsp: ENST00000431330.2:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.28C>T
  hgvsp: ENST00000415192.2:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.28C>T
  hgvsp: ENST00000504156.1:c.28C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu10Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

5-140070865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070865
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070865
    reference: chr 5
allele count: 4
allele frequency: 3.464583297243924e-5
allele num: 115454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.60G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.25G>A
  hgvsp: ENSP00000304668.3:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-462G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.25G>A
  hgvsp: ENSP00000425634.1:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.25G>A
  hgvsp: ENSP00000387893.2:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.25G>A
  hgvsp: ENSP00000421576.1:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.25G>A
  hgvsp: ENSP00000425889.1:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.25G>A
  hgvsp: ENSP00000411085.2:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.25G>A
  hgvsp: ENSP00000411511.2:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.25G>A
  hgvsp: ENSP00000393244.2:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.62G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.17G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu9Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

5-140070866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070866
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070866
    reference: chr 5
allele count: 1
allele frequency: 8.659208202002008e-6
allele num: 115484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.24G>A
  hgvsp: ENST00000507746.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.24G>A
  hgvsp: ENST00000512396.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.61G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.24G>A
  hgvsp: ENST00000431330.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.24G>A
  hgvsp: ENST00000307633.3:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-463G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.24G>A
  hgvsp: ENST00000438307.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.24G>A
  hgvsp: ENST00000504156.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.59G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.24G>A
  hgvsp: ENST00000415192.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.24G>A
  hgvsp: ENST00000457527.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.16G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27485
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu8Glu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/5-140070869-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070869
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070869
    reference: chr 5
allele count: 1
allele frequency: 8.693988976021978e-6
allele num: 115022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.21G>T
  hgvsp: ENST00000507746.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.21G>T
  hgvsp: ENST00000431330.2:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.56G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-466G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.21G>T
  hgvsp: ENST00000438307.2:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.58G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.21G>T
  hgvsp: ENST00000457527.2:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.21G>T
  hgvsp: ENST00000415192.2:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.21G>T
  hgvsp: ENST00000307633.3:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.21G>T
  hgvsp: ENST00000512396.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.21G>T
  hgvsp: ENST00000504156.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.13G>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu7Leu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

5-140070874-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070874
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070874
    reference: chr 5
allele count: 1
allele frequency: 8.738050715646353e-6
allele num: 114442
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.16G>C
  hgvsp: ENSP00000387893.2:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.8G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.16G>C
  hgvsp: ENSP00000304668.3:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.16G>C
  hgvsp: ENSP00000411511.2:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.51G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.16G>C
  hgvsp: ENSP00000411085.2:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.16G>C
  hgvsp: ENSP00000393244.2:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.16G>C
  hgvsp: ENSP00000421576.1:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-471G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.53G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.16G>C
  hgvsp: ENSP00000425889.1:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.16G>C
  hgvsp: ENSP00000425634.1:p.Ala6Pro
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19495
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala6Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-140070875-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070875
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070875
    reference: chr 5
allele count: 1
allele frequency: 8.767622922073367e-6
allele num: 114056
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.7G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.15G>C
  hgvsp: ENST00000457527.2:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.15G>C
  hgvsp: ENST00000415192.2:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.15G>C
  hgvsp: ENST00000504156.1:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.15G>C
  hgvsp: ENST00000307633.3:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.15G>C
  hgvsp: ENST00000507746.1:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.50G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-472G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.15G>C
  hgvsp: ENST00000438307.2:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.15G>C
  hgvsp: ENST00000431330.2:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.52G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.15G>C
  hgvsp: ENST00000512396.1:c.15G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19334
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala5Ala
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

5-140070876-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070876
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070876
    reference: chr 5
allele count: 670
allele frequency: 5.904436258526182e-3
allele num: 113474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.14C>A
  hgvsp: ENSP00000411511.2:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-473C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.14C>A
  hgvsp: ENSP00000425634.1:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.14C>A
  hgvsp: ENSP00000393244.2:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.14C>A
  hgvsp: ENSP00000387893.2:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.14C>A
  hgvsp: ENSP00000304668.3:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.49C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.14C>A
  hgvsp: ENSP00000425889.1:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.14C>A
  hgvsp: ENSP00000421576.1:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000502888
  gene symbol: HARS
  hgvsc: ENST00000502888.1:n.6C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.51C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.14C>A
  hgvsp: ENSP00000411085.2:p.Ala5Glu
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 3.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 24803
  bin: 2.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19119
  bin: 2.75e1
  variant carriers: 111
genotype quality: GenotypeQuality
hgvs: p.Ala5Glu
num of homozygotes: 3
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-140070890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070890
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070890
    reference: chr 5
allele count: 3
allele frequency: 2.718868950516585e-5
allele num: 110340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.37G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-487G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-1G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17789
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20918
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

5-140070892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070892
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070892
    reference: chr 5
allele count: 1
allele frequency: 9.119594360442848e-6
allele num: 109654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-489G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.33G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20136
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-140070893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070893
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070893
    reference: chr 5
allele count: 3
allele frequency: 2.737825801270351e-5
allele num: 109576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-490C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.32C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.34C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17552
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

5-140070894-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070894
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070894
    reference: chr 5
allele count: 1
allele frequency: 9.159018885896942e-6
allele num: 109182
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.31C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-491C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.33C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-5C>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

5-140070898-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070898
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070898
    reference: chr 5
allele count: 2
allele frequency: 1.855459690138232e-5
allele num: 107790
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.27A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-495A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.29A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16304
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12465
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

5-140070899-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070899
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070899
    reference: chr 5
allele count: 6
allele frequency: 5.60475283040018e-5
allele num: 107052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-496G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.28G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.26G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-10G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15509
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15847
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3229
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

5-140070905-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070905
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070905
    reference: chr 5
allele count: 1
allele frequency: 9.532706716745152e-6
allele num: 104902
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.22C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-502C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.20C>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13077
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

5-140070910-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070910
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070910
    reference: chr 5
allele count: 1
allele frequency: 9.74089226573154e-6
allele num: 102660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-507C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.15C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.17C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-21C>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10643
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

5-140070912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070912
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070912
    reference: chr 5
allele count: 15
allele frequency: 1.467136150234742e-4
allele num: 102240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.13G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.15G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-509G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-23G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21058
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9515
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10405
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17644
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

5-140070913-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070913
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070913
    reference: chr 5
allele count: 1
allele frequency: 9.823761714835845e-6
allele num: 101794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-510A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.14A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-24A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.12A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20352
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

5-140070914-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070914
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070914
    reference: chr 5
allele count: 10
allele frequency: 9.866019455790366e-5
allele num: 101358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-511C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.13C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.11C>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-25C>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21916
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 3.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

5-140070916-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070916
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070916
    reference: chr 5
allele count: 1
allele frequency: 1.000040001600064e-5
allele num: 99996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.9A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-27A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.11A>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000413605
  ensembl transcript: ENST00000448240
  gene symbol: HARS
  hgvsc: ENST00000448240.1:c.-513A>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9550
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

5-140070918-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070918
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070918
    reference: chr 5
allele count: 1
allele frequency: 1.002164675699511e-5
allele num: 99784
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.7A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.9A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-29A>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-140070921-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070921
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070921
    reference: chr 5
allele count: 2
allele frequency: 2.035913514393909e-5
allele num: 98236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.6G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.4G>T
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23321
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6334
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/5-140070923-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070923
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070923
    reference: chr 5
allele count: 1
allele frequency: 1.032524522457408e-5
allele num: 96850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.2T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-34T>G
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.4T>G
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9030
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6454
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2198
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

5-140070924-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070924
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070924
    reference: chr 5
allele count: 1
allele frequency: 1.03137440953815e-5
allele num: 96958
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.1G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.3G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-35G>C
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

5-140070924-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140070924
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140070924
    reference: chr 5
allele count: 4
allele frequency: 4.125497638152602e-5
allele num: 96958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000518126
  gene symbol: HARS
  hgvsc: ENST00000518126.1:n.1G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000387893
  ensembl transcript: ENST00000457527
  gene symbol: HARS
  hgvsc: ENST00000457527.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000421576
  ensembl transcript: ENST00000512396
  gene symbol: HARS
  hgvsc: ENST00000512396.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425889
  ensembl transcript: ENST00000507746
  gene symbol: HARS
  hgvsc: ENST00000507746.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411085
  ensembl transcript: ENST00000415192
  gene symbol: HARS
  hgvsc: ENST00000415192.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000304668
  ensembl transcript: ENST00000307633
  gene symbol: HARS
  hgvsc: ENST00000307633.3:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000393244
  ensembl transcript: ENST00000431330
  gene symbol: HARS
  hgvsc: ENST00000431330.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000411511
  ensembl transcript: ENST00000438307
  gene symbol: HARS
  hgvsc: ENST00000438307.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000170445
  ensembl transcript: ENST00000506579
  gene symbol: HARS
  hgvsc: ENST00000506579.1:n.3G>A
  variant of: http://identifiers.org/hgnc/4816
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170445
  ensembl protein: ENSP00000425634
  ensembl transcript: ENST00000504156
  gene symbol: HARS
  hgvsc: ENST00000504156.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/4816
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23282
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

GenotypeDepth
all individuals: 48
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1595
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3841
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 4.119e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

DP
type: SiteQuality
SIO_000300: 1.899022e6

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

GenotypeDepth
all individuals: 77
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7434
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3841
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.899022e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 4.119e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4382
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
SIO_000300: 1.341e1

DP
type: SiteQuality
SIO_000300: 1.898954e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: -1.046e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeDepth
all individuals: 65
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 745
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3842
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30708
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

DP
type: SiteQuality
SIO_000300: 1.898935e6

MQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

QD
type: SiteQuality
SIO_000300: 1.148e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeDepth
all individuals: 65
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11581
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2915
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3841
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.341e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

FS
type: SiteQuality
SIO_000300: 3.734e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

DP
type: SiteQuality
SIO_000300: 1.89897e6

GenotypeDepth
all individuals: 48
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 3

GenotypeDepth
all individuals: 243
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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ClippingRankSum
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FS
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QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Latino
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European (Non-Finnish)
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DP
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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ClippingRankSum
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VQSLOD
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QD
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DP
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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DP
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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QD
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VQSLOD
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 16500
num of homozygotes: 0

East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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Latino
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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FS
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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African
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South Asian
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Latino
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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BaseQRankSum
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QD
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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East Asian
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African
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Other
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InbreedingCoeff
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DP
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Latino
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QD
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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African
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European (Non-Finnish)
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Latino
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MQ
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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QD
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

QD
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MQRankSum
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SIO_000300: -6.840000000000001e-1

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -7.02e-1

BaseQRankSum
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SIO_000300: -1.031e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.879806e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504302304591131e-5
allele num: 66476
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.931e0

QD
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VQSLOD
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SIO_000300: 1.15e-1

BaseQRankSum
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SIO_000300: -1.969e0

FS
type: SiteQuality
SIO_000300: 1.388e0

InbreedingCoeff
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SIO_000300: 1.45e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.44e-1

DP
type: SiteQuality
SIO_000300: 1.878675e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 28

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 29
allele frequency: 1.76056338028169e-3
allele num: 16472
num of homozygotes: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -2.93e-1

MQRankSum
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SIO_000300: 2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
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SIO_000300: 2.59e-2

DP
type: SiteQuality
SIO_000300: 1.869448e6

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.23e0

QD
type: SiteQuality
SIO_000300: 1.448e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.867e1

InbreedingCoeff
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SIO_000300: -3.0e-4

ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 1.84144e6

QD
type: SiteQuality
SIO_000300: 1.238e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.033612425676495e-5
allele num: 65928
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.526158354190831e-5
allele num: 65524
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65414
num of homozygotes: 0

East Asian
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allele count: 4
allele frequency: 4.767580452920143e-4
allele num: 8390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

DP
type: SiteQuality
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QD
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4896
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5700
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62496
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.192179303767287e-4
allele num: 8388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11672
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ReadPosRankSum
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SIO_000300: -3.3e-2

QD
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SIO_000300: 9.73e0

VQSLOD
type: SiteQuality
SIO_000300: 8.72e-1

BaseQRankSum
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SIO_000300: 7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

DP
type: SiteQuality
SIO_000300: 1.245842e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.57e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.745810055865922e-4
allele num: 5728
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.189690918949954e-5
allele num: 62702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.133999999999999e-1

InbreedingCoeff
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SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.701e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -1.449e0

DP
type: SiteQuality
SIO_000300: 1.275329e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 298
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.772735330615139e-4
allele num: 11282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.492936679408343e-4
allele num: 12034
num of homozygotes: 0

European (Non-Finnish)
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allele count: 17
allele frequency: 2.691491719704886e-4
allele num: 63162
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

VQSLOD
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SIO_000300: 3.34e0

FS
type: SiteQuality
SIO_000300: 1.471e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
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SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.146e1

DP
type: SiteQuality
SIO_000300: 1.341934e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5587
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.03e-1

BaseQRankSum
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SIO_000300: -2.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.374012e6

FS
type: SiteQuality
SIO_000300: 1.84e0

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

QD
type: SiteQuality
SIO_000300: 1.632e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1051
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170686022008897e-4
allele num: 8542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.107e0

QD
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DP
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InbreedingCoeff
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SIO_000300: -1.2e-3

MQRankSum
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ClippingRankSum
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.682e1

BaseQRankSum
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SIO_000300: -1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.536e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63656
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5888
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.88e1

FS
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.704701565097388e-5
allele num: 63766
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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BaseQRankSum
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MQ
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MQRankSum
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DP
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QD
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ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9972
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.854225573358467e-5
allele num: 12732
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63774
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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QD
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MQ
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DP
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MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10008
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South Asian
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allele count: 1
allele frequency: 7.630093087135663e-5
allele num: 13106
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: -2.89e-1

QD
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.684425845538865e-5
allele num: 64042
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele count: 0
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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FS
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.556178026766262e-5
allele num: 64260
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11422
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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DP
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MQ
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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SIO_000300: 5.71e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.327746741154562e-4
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64644
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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DP
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ReadPosRankSum
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QD
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 21
allele frequency: 3.245047439503044e-4
allele num: 64714
num of homozygotes: 0

African
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Other
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South Asian
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allele count: 0
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Latino
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allele count: 1
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allele num: 11442
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VQSLOD
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MQRankSum
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MQ
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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Other
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South Asian
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European (Finnish)
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African
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.741258741258741e-5
allele num: 11440
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.540784567501772e-5
allele num: 64902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15114
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

FS
type: SiteQuality
SIO_000300: 1.429e0

QD
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SIO_000300: 1.093e1

VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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SIO_000300: -1.894e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

ClippingRankSum
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SIO_000300: -2.5e-2

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.698466465480077e-5
allele num: 64948
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

FS
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SIO_000300: 4.615e0

BaseQRankSum
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SIO_000300: -8.400000000000001e-2

VQSLOD
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SIO_000300: 1.0e-2

MQRankSum
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SIO_000300: 1.65e-1

DP
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SIO_000300: 1.457e6

ClippingRankSum
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SIO_000300: 4.17e-1

QD
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SIO_000300: 7.54e0

ReadPosRankSum
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SIO_000300: 2.83e-1

MQ
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SIO_000300: 5.97e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 474
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

East Asian
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allele count: 129
allele frequency: 1.505250875145858e-2
allele num: 8570
num of homozygotes: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6010
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.327e0

InbreedingCoeff
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SIO_000300: 2.47e-2

DP
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SIO_000300: 1.456385e6

ClippingRankSum
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SIO_000300: 1.3e-2

FS
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SIO_000300: 5.33e-1

MQ
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SIO_000300: 5.962e1

MQRankSum
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SIO_000300: 8.599999999999999e-2

QD
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SIO_000300: 1.076e1

ReadPosRankSum
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SIO_000300: 2.89e-1

VQSLOD
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SIO_000300: 3.45e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 456
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559235350983878e-5
allele num: 64134
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -9.48e-1

VQSLOD
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SIO_000300: -8.057e-1

ReadPosRankSum
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SIO_000300: 1.39e0

BaseQRankSum
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SIO_000300: -4.345e0

InbreedingCoeff
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SIO_000300: -9.0e-4

MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 1.429991e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.97e-1

QD
type: SiteQuality
SIO_000300: 7.78e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.660281989890929e-4
allele num: 15036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63976
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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SIO_000300: 0.0e0

VQSLOD
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QD
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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SIO_000300: -9.31e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 1.010713563776026e-4
allele num: 9894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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VQSLOD
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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African
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European (Finnish)
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5340
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023751023751024e-4
allele num: 9768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.387e0

DP
type: SiteQuality
SIO_000300: 1.400952e6

QD
type: SiteQuality
SIO_000300: 1.171e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.865e0

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeDepth
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
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variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40796
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.029230135858378e-4
allele num: 9716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63308
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.855e1

DP
type: SiteQuality
SIO_000300: 1.393808e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.071e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.32e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeDepth
all individuals: 39
bin: 6.25e1
variant carriers: 8

GenotypeDepth
all individuals: 339
bin: 4.25e1
variant carriers: 66

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1250
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1394
bin: 9.75e1
variant carriers: 649

GenotypeQuality
all individuals: 777
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 911
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 618
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 6910
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39194
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 155
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 266
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 349
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 698
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4979
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1161
bin: 3.25e1
variant carriers: 1

Latino
type: Population
allele count: 68
allele frequency: 6.035860110065685e-3
allele num: 11266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.913709116214335e-3
allele num: 5748
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 9.779951100244499e-3
allele num: 818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 545
allele frequency: 8.646676185943203e-3
allele num: 63030
num of homozygotes: 3

African
type: Population
allele count: 17
allele frequency: 1.760928112699399e-3
allele num: 9654
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 1.442902294901745e-3
allele num: 14554
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.392316e6

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

FS
type: SiteQuality
SIO_000300: 1.195e0

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-1

QD
type: SiteQuality
SIO_000300: 1.063e1

GenotypeQuality
all individuals: 1997
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10633
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 617
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34673
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9358
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.654970760233918e-4
allele num: 8208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.911e0

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 5.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.310385e6

VQSLOD
type: SiteQuality
SIO_000300: -3.16e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

GenotypeQuality
all individuals: 752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1038
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11324
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.636072118058964e-5
allele num: 61122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
SIO_000300: 4.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

VQSLOD
type: SiteQuality
SIO_000300: -8.018999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.296987e6

FS
type: SiteQuality
SIO_000300: 2.046e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

GenotypeQuality
all individuals: 634
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 481
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variant carriers: 0

GenotypeQuality
all individuals: 11436
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variant carriers: 0

GenotypeQuality
all individuals: 34359
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variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 751
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variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4368
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variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 199
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variant carriers: 0

GenotypeQuality
all individuals: 505
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variant carriers: 0

GenotypeQuality
all individuals: 388
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GenotypeQuality
all individuals: 1011
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
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variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.637572462581469e-5
allele num: 61066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.457725947521866e-4
allele num: 13720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

QD
type: SiteQuality
SIO_000300: 2.313e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.295662e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
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GenotypeQuality
all individuals: 33780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
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variant carriers: 0

GenotypeQuality
all individuals: 2212
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GenotypeQuality
all individuals: 714
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GenotypeQuality
all individuals: 418
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GenotypeQuality
all individuals: 216
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GenotypeQuality
all individuals: 11834
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GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 2372
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variant carriers: 0

GenotypeQuality
all individuals: 179
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variant carriers: 0

GenotypeQuality
all individuals: 482
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GenotypeQuality
all individuals: 512
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 128
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GenotypeQuality
all individuals: 4288
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variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11010
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.642521599159029e-5
allele num: 60882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

DP
type: SiteQuality
SIO_000300: 1.287564e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

GenotypeQuality
all individuals: 329
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 321
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GenotypeQuality
all individuals: 266
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GenotypeQuality
all individuals: 2839
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variant carriers: 0

GenotypeQuality
all individuals: 1293
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GenotypeQuality
all individuals: 205
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GenotypeQuality
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GenotypeQuality
all individuals: 607
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GenotypeQuality
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GenotypeQuality
all individuals: 746
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GenotypeQuality
all individuals: 30679
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 235
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variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 8.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.100352112676056e-4
allele num: 9088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659751037344398e-5
allele num: 60250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7994
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.241041e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.382e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
SIO_000300: -9.898e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

GenotypeQuality
all individuals: 579
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3824
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.542701393095094e-4
allele num: 13208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.149999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.14e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.37e-1

DP
type: SiteQuality
SIO_000300: 1.214405e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58806
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.13869278068777e-4
allele num: 8782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.56e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.265e-1

DP
type: SiteQuality
SIO_000300: 1.148062e6

QD
type: SiteQuality
SIO_000300: 1.204e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2459
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12424
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.170411985018727e-4
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
SIO_000300: 4.71e0

MQRankSum
type: SiteQuality
SIO_000300: 8.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.54e-1

DP
type: SiteQuality
SIO_000300: 1.084476e6

VQSLOD
type: SiteQuality
SIO_000300: -2.063e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.432e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.488e0

GenotypeQuality
all individuals: 5751
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 755
bin: 9.75e1
variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 564
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GenotypeQuality
all individuals: 415
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.319609395618897e-4
allele num: 7578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 1.133970516766564e-3
allele num: 12346
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.247e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 1.052406e6

QD
type: SiteQuality
SIO_000300: 1.917e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 459
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 745
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variant carriers: 1

GenotypeQuality
all individuals: 16409
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57354
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.151287903488751e-5
allele num: 12268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
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QD
type: SiteQuality
SIO_000300: 1.176e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.195e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.037081e6

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.517e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.928268414963363e-4
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 9.523809523809524e-4
allele num: 8400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57132
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5070
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DP
type: SiteQuality
SIO_000300: 1.028079e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

QD
type: SiteQuality
SIO_000300: 1.036e1

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 1.4459e1

BaseQRankSum
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SIO_000300: -3.027e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 130
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GenotypeQuality
all individuals: 108
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4962
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African
type: Population
allele count: 1
allele frequency: 1.215953307392996e-4
allele num: 8224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
SIO_000300: 1.926e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.83211e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56378
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.21447656060238e-4
allele num: 8234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4972
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -3.229e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.184e1

DP
type: SiteQuality
SIO_000300: 9.80489e5

MQ
type: SiteQuality
SIO_000300: 5.915e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

GenotypeQuality
all individuals: 7745
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.92e-1

QD
type: SiteQuality
SIO_000300: 9.73e0

DP
type: SiteQuality
SIO_000300: 9.52773e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.820631394967775e-5
allele num: 54926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

DP
type: SiteQuality
SIO_000300: 9.32403e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21056
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.81705854562634e-5
allele num: 55034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.007e0

QD
type: SiteQuality
SIO_000300: 1.161e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

DP
type: SiteQuality
SIO_000300: 9.27006e5

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.564830272676684e-4
allele num: 7188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2